| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,022,430 | C→A | 5.5% | P634P (CCG→CCT) | fadB ← | fused 3‑hydroxybutyryl‑CoA epimerase/delta(3)‑cis‑delta(2)‑trans‑enoyl‑CoA isomerase/enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,022,430 | 0 | C | A | 5.5% | 826.3 / 12.8 | 215 | P634P (CCG→CCT) | fadB | fused 3‑hydroxybutyryl‑CoA epimerase/delta(3)‑cis‑delta(2)‑trans‑enoyl‑CoA isomerase/enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (84/119); new base A (5/7); total (89/126) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 218 total aligned reads displayed.
GTATTTTGCGCTACCGAGGGTGTCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTACCTTTGCTGTCTTCTTTATAACGCCAGAAACCGAGGCCG > CP009273/4022283‑4022577 | gTATTTTGCGCTACCGAGGGTGTCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATc > 2:295911/1‑148 (MQ=255) tATTTTGCGCTACCGAGGGTGTCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCg < 1:2555422/148‑1 (MQ=255) tttGCGCTACCGAGGGTGTCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGa > 1:2281448/1‑148 (MQ=255) ttGCGCTACCGAGGGTGTCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATAGGGat > 2:2288198/1‑148 (MQ=255) tGCGCTACCGAGGGTGTCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGatc < 2:1236786/148‑1 (MQ=255) cgcTACCGAGGGTGTCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGatcat < 1:857013/148‑1 (MQ=255) cgcTACCGAGGGTGTCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGatcat > 2:2834921/1‑148 (MQ=255) cgcTACCGAGGGTGTCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGatcat > 2:1644930/1‑148 (MQ=255) gcTACCGAGGGTGTCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGatcatc < 1:1467790/148‑1 (MQ=255) cTACCGAGGGTGTCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGAtcatca > 2:1607943/1‑148 (MQ=255) tACCGAGGGTGTCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATcatcat < 1:912011/148‑1 (MQ=255) tACCGAGGGTGTCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATcatcat > 1:53368/1‑148 (MQ=255) aCCGAGGGTGTCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATg > 2:1087684/1‑148 (MQ=255) aCCGAGGGTGTCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATg > 2:1616826/1‑148 (MQ=255) aCCGAGGGTGTCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCAATTCGTTGACCATCGGGATCATCATg < 2:2135348/148‑1 (MQ=255) aGGGTGTCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCggg > 2:802722/1‑148 (MQ=255) ggTGTCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCg < 2:1761316/148‑1 (MQ=255) ggTGTCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCg < 1:2614517/148‑1 (MQ=255) gtgtCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATCTCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGa < 2:2056719/148‑1 (MQ=255) gtgtCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGa > 2:3395074/1‑148 (MQ=255) tCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTAGTTGACCATCGGGATCATCATGCGGGCGATaa < 1:477214/148‑1 (MQ=255) ccagccagCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAAt < 1:1672986/148‑1 (MQ=255) agccagcGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAAtct < 2:3238645/148‑1 (MQ=255) ccagcGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATctct < 2:1091608/148‑1 (MQ=255) cagcGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATAGGGATCATCATGCGGGCGATAATCtctt < 1:2013422/148‑1 (MQ=255) gcGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATCATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCtcttct > 2:2732857/1‑148 (MQ=255) gcGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCtcttct < 1:669753/148‑1 (MQ=255) cGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTcttctt > 2:2112257/1‑148 (MQ=255) cGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTcttctt < 1:2839326/148‑1 (MQ=255) cGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTcttctt > 1:1618109/1‑148 (MQ=255) aaCGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGc < 1:2377368/148‑1 (MQ=255) cgcgCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTg < 2:961063/148‑1 (MQ=255) cgcgCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTg < 2:3388976/148‑1 (MQ=255) gccgccGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATAGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGaaa < 2:581935/148‑1 (MQ=255) ccgccgTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAAt < 1:1639353/148‑1 (MQ=255) gccgTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATcg > 1:355471/1‑148 (MQ=255) gccgTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATcg < 1:2502136/148‑1 (MQ=255) gccgTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATcg < 1:3055490/148‑1 (MQ=255) gccgTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATcg < 1:3008604/148‑1 (MQ=255) cgTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATcgcg > 2:1066771/1‑148 (MQ=255) gTGGAACGGAGGGAAGCCCTGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATATTGCCTTCCTCCAGACAGCGCACCACTTCGTGGACCAACGGGATCATCATGCGGGCGAT‑ATCTCTTCTTCGCTGAAATCGCGCt < 1:3307813/148‑1 (MQ=255) gTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCgcgc < 1:1748499/148‑1 (MQ=255) tGGAACGGAGGGAAGCCCTGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCt < 1:1786349/148‑1 (MQ=255) ggAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCtt < 1:1285082/148‑1 (MQ=255) gAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTc > 2:3448234/1‑148 (MQ=255) aGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCAc < 1:806082/148‑1 (MQ=255) cAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCt > 2:3065008/1‑148 (MQ=255) ggCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGc < 1:843187/148‑1 (MQ=255) ggCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCGTCGGCTGGCTCACTTCTGc < 1:747776/148‑1 (MQ=255) gTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTGCGGCTGGCTCACTTCTGCcagc < 1:1607943/148‑1 (MQ=255) tAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCcagca < 1:1166797/148‑1 (MQ=255) gACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAgg > 2:3121294/1‑148 (MQ=255) gACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAgg > 2:3120535/1‑148 (MQ=255) ccAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTc < 1:2775182/148‑1 (MQ=255) ccAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTc > 2:2877152/1‑148 (MQ=255) cgcCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCa < 1:2197689/148‑1 (MQ=255) tatCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAAcggc < 2:1151821/148‑1 (MQ=255) atCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAAcggcg > 2:2484687/1‑148 (MQ=255) tCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAAcggcgg < 2:1418029/148‑1 (MQ=255) ccGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACggcggc > 1:1549066/1‑148 (MQ=255) cGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGgcggcg > 1:1932202/1‑148 (MQ=255) cTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGtc < 1:2088086/148‑1 (MQ=255) tCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGtctt < 2:879131/148‑1 (MQ=255) tCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGtctt < 1:1088242/148‑1 (MQ=255) ccgccgGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGAGAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGtcgtg > 1:307213/1‑145 (MQ=255) cgccgGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGtcttct < 1:2889856/148‑1 (MQ=255) gccgGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGtcttctt > 2:740192/1‑148 (MQ=255) ccgGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGtcttcttc < 1:611946/148‑1 (MQ=255) cgGAGTGGCGATTATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGtcttcttct < 2:2373171/148‑1 (MQ=255) gAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCttcttt < 2:2094003/148‑1 (MQ=255) gAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCttcttt > 2:3428690/1‑148 (MQ=255) aGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCttctttc < 1:1644930/148‑1 (MQ=255) aGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCttctttc < 2:2842779/148‑1 (MQ=255) tGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTtctttctt < 2:1642429/148‑1 (MQ=255) tAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCtt < 2:127052/148‑1 (MQ=255) aaTGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTa > 1:3308769/1‑148 (MQ=255) aaTGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTa < 2:2645692/148‑1 (MQ=255) aaTGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTa > 2:2850708/1‑148 (MQ=255) aTGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTAc < 1:332545/148‑1 (MQ=255) aTGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTAc < 2:858490/148‑1 (MQ=255) gCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTACCt < 1:2746288/148‑1 (MQ=255) ccTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTACCtt > 2:916846/1‑148 (MQ=255) ttCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTACCTTTg < 2:53368/148‑1 (MQ=255) ccAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTACCTTTGCTGtc < 1:3419894/148‑1 (MQ=255) cAGACAGCGCACCACTTCGTTGACCATAGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTACCTTTGCTGtct < 1:2288186/148‑1 (MQ=255) aGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTACCTTTGCTGtctt > 1:1920229/1‑148 (MQ=255) gACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTACCTTTGCTGtcttc > 2:3378641/1‑148 (MQ=255) aCAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTACCTTTGCTGtcttct > 2:1647159/1‑148 (MQ=255) cAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTACCTTTGCTGTcttctt < 2:2804885/148‑1 (MQ=255) caccacTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTACCTTTTCTGTCTTCTTTATaa > 1:3390715/1‑148 (MQ=255) ccacTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTACCTTTGCTGTCTTCTTTATAACg < 1:2729400/148‑1 (MQ=255) acTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTACCTTTGCTGTCTTCTTTATAACGcc > 2:363874/1‑148 (MQ=255) ttGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTACCTTTGCTGTCTTCTTTATAACGCCAGAAAc > 2:3085054/1‑148 (MQ=255) ttGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTACCTTTGCTGTCTTCTTTATAACGCCAGAAAc > 2:3066808/1‑148 (MQ=255) aCCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTACCTTTGCTGTCTTCTTTATAACGCCAGAAACCGa < 2:67792/148‑1 (MQ=255) ccATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTACCTTTGCTGTCTTCTTTATAACGCCAGAAACCGAg < 2:2281448/148‑1 (MQ=255) cATAGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTACCTTTGCTGTCTTCTTTATAACGCCAGAAACCGAgg > 2:1705341/1‑148 (MQ=255) cATAGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCGTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTACCTTTGCTGTCTTCTTTATAACGCCAGAAACCGAgg > 2:452275/1‑148 (MQ=255) aTCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTACCTTTGCTGTCTTCTTTATAACGCCAGAAACCGAGGc > 2:1593530/1‑148 (MQ=255) cGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTACCTTTGCTGTCTTCTTTATAACGCCAGAAACCGAGGCCg < 2:1850753/148‑1 (MQ=255) | GTATTTTGCGCTACCGAGGGTGTCCAGCCAGCGGAACGCGCCGCCGTGGAACGGAGGGAAGCCCAGGCCGTAGACCAGCGCCATATCCGCTTCCGCCGGAGTGGCGATAATGCCTTCCTCCAGACAGCGCACCACTTCGTTGACCATCGGGATCATCATGCGGGCGATAATCTCTTCTTCGCTGAAATCGCGCTTCGGCTGGCTCACTTCTGCCAGCAGGTCTTCAACGGCGGCGTCTTCTTCTTTCTTCGGCTTACCTTTGCTGTCTTCTTTATAACGCCAGAAACCGAGGCCG > CP009273/4022283‑4022577 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |