| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,108,175 | C→T | 100% | intergenic (‑157/‑268) | glpF ← / → zapB | glycerol facilitator/FtsZ stabilizer; septal ring assembly factor, stimulates cell division |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,108,175 | 0 | C | T | 97.1% | 797.4 / 9.7 | 244 | intergenic (‑157/‑268) | glpF/zapB | glycerol facilitator/FtsZ stabilizer; septal ring assembly factor, stimulates cell division |
| Reads supporting (aligned to +/- strand): ref base C (4/3); new base T (128/109); total (132/112) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 244 total aligned reads displayed.
GAAGAGTTAATGTTTGTTGTATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGCCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCG > CP009273/4108030‑4108317 | gAAGAGTTAATGTTTGTTGTATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCa < 2:2459513/148‑1 (MQ=255) agTGAATGTTTGTTGTATGCGTGAAAGTCACGGACCTCCACGATGCGTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTa < 1:1384864/148‑1 (MQ=255) ttAATGTTTGTTGTATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTAtt < 2:783014/148‑1 (MQ=255) tAATGTTTGTTGTATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTc > 2:339972/1‑148 (MQ=255) tgtttgttGTATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCAt > 1:547839/1‑148 (MQ=255) tgtttgttGTATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCAt < 1:2236469/148‑1 (MQ=255) gtttgttGTATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATc > 2:371401/1‑148 (MQ=255) ttgttgTATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTg < 1:389713/148‑1 (MQ=255) ttgtATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGAtt > 2:1386850/1‑148 (MQ=255) tgtATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTg > 1:1755576/1‑148 (MQ=255) tgtATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTg < 2:53931/148‑1 (MQ=255) gtATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGt < 2:2681404/148‑1 (MQ=255) tATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTa > 2:3214184/1‑148 (MQ=255) aTGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTAc > 2:1360632/1‑148 (MQ=255) aTGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTAc > 1:2173092/1‑148 (MQ=255) aTGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTAc > 2:1416623/1‑148 (MQ=255) tGAAAGTCACGGACCTCCACGATGCTTGTAGGCATTCTGTAAACTTATCGTTAACGAGCAACAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACatgat < 1:1562512/148‑1 (MQ=255) aaGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCa > 2:1116015/1‑148 (MQ=255) aaGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCa > 2:2895212/1‑148 (MQ=255) aaGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTCAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGCCATTTATTCCATCTGATTGTACATGATGCa < 1:2821534/148‑1 (MQ=255) aGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCAt > 2:1061379/1‑148 (MQ=255) tCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCAtgt < 2:368191/148‑1 (MQ=255) ccTCGACTATGCTTGTATGAATGCTTTAAAATTTTAGTTAACTATAAAAATCTAGAAATATCTAAATTAAAATGTGTTTGCCTCGTCTTAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAg < 2:2098522/148‑1 (MQ=255) tCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGAt > 2:665304/1‑148 (MQ=255) tCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGAt > 2:665215/1‑148 (MQ=255) tCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGAt > 2:1045062/1‑148 (MQ=255) cACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCa > 2:3361010/1‑148 (MQ=255) cACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCa < 2:2786233/148‑1 (MQ=255) aCGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCAt < 1:1813453/148‑1 (MQ=255) aCGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCAt < 1:1656160/148‑1 (MQ=255) gATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTc < 2:1906490/148‑1 (MQ=255) aTGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTcg < 1:3078702/148‑1 (MQ=255) gCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTcgcg > 2:1151918/1‑148 (MQ=255) cTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCgcgc > 1:929544/1‑148 (MQ=255) tGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGcaa > 2:912130/1‑148 (MQ=255) tAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGcaaca < 2:547839/148‑1 (MQ=255) aGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGcaacaa < 2:3255788/148‑1 (MQ=255) ggCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACaaa > 1:1256222/1‑148 (MQ=255) ggCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACaaa > 2:2095462/1‑148 (MQ=255) gCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAAt < 2:3030578/148‑1 (MQ=255) aTGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAAttt < 2:2364741/148‑1 (MQ=255) aTGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAAttt < 1:2764490/148‑1 (MQ=255) tGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATtta < 2:1233537/148‑1 (MQ=255) gCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATttat > 1:480021/1‑148 (MQ=255) gCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATttat < 1:235899/148‑1 (MQ=255) gTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTaa < 1:3490016/148‑1 (MQ=255) tAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAAc < 2:1494008/148‑1 (MQ=255) aaaCTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACa < 1:2353857/148‑1 (MQ=255) aCTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACAtt > 1:295415/1‑148 (MQ=255) aTCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCg < 1:280947/148‑1 (MQ=255) tCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGa > 1:2422645/1‑148 (MQ=255) cGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGAt < 1:256798/148‑1 (MQ=255) cGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGAt > 1:703752/1‑148 (MQ=255) tAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGa < 1:2668329/148‑1 (MQ=255) tAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGa > 1:2982284/1‑148 (MQ=255) cAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGAt > 2:2961873/1‑148 (MQ=255) aaaCGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTAt > 2:3506084/1‑148 (MQ=255) aCGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGt > 1:83536/1‑148 (MQ=255) aCGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGt < 2:2914807/148‑1 (MQ=255) aCGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGt < 2:1255660/148‑1 (MQ=255) gaAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCAcc > 1:3219587/1‑148 (MQ=255) aaaTATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCa > 1:2265910/1‑148 (MQ=255) aaaTATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCa > 2:2356157/1‑148 (MQ=255) aaaTATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATAGATGTGGATTATGTCACCa > 1:3357960/1‑148 (MQ=255) aaTATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAg < 1:295183/148‑1 (MQ=255) atatCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAgg < 2:1912793/148‑1 (MQ=255) tatCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGga < 2:2529136/148‑1 (MQ=255) tatCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGga > 1:1058860/1‑148 (MQ=255) tCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTTGATTGATGTGGATTATGTCACCAGgaga > 2:3447051/1‑148 (MQ=255) cGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGaa > 2:3449225/1‑148 (MQ=255) cGAACTCAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGCCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGaa > 2:3069339/1‑148 (MQ=255) gAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAg < 1:178526/148‑1 (MQ=255) aCTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGa > 1:1035352/1‑148 (MQ=255) cTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGAt < 2:1698580/148‑1 (MQ=255) ttAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATg > 1:3248935/1‑148 (MQ=255) aaaTGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGCCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGaaa < 2:1791068/148‑1 (MQ=255) gtgtgtgCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAgtg < 2:1611113/148‑1 (MQ=255) tgtgtgCTTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAgtgt < 2:1533667/148‑1 (MQ=255) tgtgtgCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAgtgt < 1:1151918/148‑1 (MQ=255) gtgtgCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGtgtg > 2:295040/1‑148 (MQ=255) gCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCaa > 1:2040840/1‑148 (MQ=255) cTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAAc < 2:2730602/148‑1 (MQ=255) tCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAAcc > 2:1885612/1‑148 (MQ=255) tCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTa > 1:1299296/1‑148 (MQ=255) tCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTa > 1:3075103/1‑148 (MQ=255) cATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTaa > 2:634123/1‑148 (MQ=255) cATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTaa < 2:3331906/148‑1 (MQ=255) aTAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAAt < 2:926330/148‑1 (MQ=255) aTAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAAt < 2:1772560/148‑1 (MQ=255) tGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCaa < 1:2385445/148‑1 (MQ=255) tGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCaa < 1:3442778/148‑1 (MQ=255) cGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCg < 2:3515478/148‑1 (MQ=255) ttATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTg < 2:1659056/148‑1 (MQ=255) tATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGc > 1:1927758/1‑148 (MQ=255) tATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGc < 2:557703/148‑1 (MQ=255) tATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGc > 1:126101/1‑148 (MQ=255) tATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGc > 1:1207149/1‑148 (MQ=255) tATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGc < 2:1932247/148‑1 (MQ=255) tATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGc < 2:2341662/148‑1 (MQ=255) tCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCg > 1:1005484/1‑148 (MQ=255) | GAAGAGTTAATGTTTGTTGTATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGCCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCG > CP009273/4108030‑4108317 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |