| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,117,657 | G→T | 27.0% | R56S (CGC→AGC) | yiiX ← | putative lipid binding hydrolase, DUF830 family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,117,657 | 0 | G | T | 27.0% | 447.1 / 125.0 | 206 | R56S (CGC→AGC) | yiiX | putative lipid binding hydrolase, DUF830 family protein |
| Reads supporting (aligned to +/- strand): ref base G (65/85); new base T (26/30); total (91/115) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 209 total aligned reads displayed.
CCAGTTTTTGCTGTTGTTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGAT > CP009273/4117513‑4117804 | ccAGTTTTTGCTGTTGTTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTAt < 2:79023/148‑1 (MQ=255)ccAGTTTTTGCTGTTGTTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTAt > 1:3552967/1‑148 (MQ=255)ccAGTTTTTGCTGTTGTTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTAt < 1:3262792/148‑1 (MQ=255)ccAGTTTTTGCTGTTGTTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTAt < 2:2858931/148‑1 (MQ=255) gTTTTTGCTGTTGTTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCAc < 1:987004/148‑1 (MQ=255) tGCTGTTGTTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCa < 2:889126/148‑1 (MQ=255) gttgttCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTGTTTGTTGCGTATCACCAGCATAcc > 2:1589077/1‑148 (MQ=255) gttCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGgt < 2:1445359/148‑1 (MQ=255) tCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGgtgt < 1:1331583/148‑1 (MQ=255) aaCACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTgg < 2:3241570/148‑1 (MQ=255) aaCACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTgg > 1:805180/1‑148 (MQ=255) cacTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCt > 1:2607680/1‑148 (MQ=255) cacTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCt > 1:108062/1‑148 (MQ=255) cacTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCt > 2:1417948/1‑148 (MQ=255) cTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCtat > 1:242560/1‑148 (MQ=255) aGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAAt < 1:161840/148‑1 (MQ=255) ccGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCgg < 1:688714/148‑1 (MQ=255) cGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGt < 2:3382994/148‑1 (MQ=255) ccTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTAt > 2:1106592/1‑148 (MQ=255) cTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATg < 1:340223/148‑1 (MQ=255) tCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATggg < 2:1924634/148‑1 (MQ=255) cAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGt > 1:268437/1‑148 (MQ=255) aCGCGGCGAACAACGTATTTGCCCTTTTCACCCTGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCg < 1:4943/148‑1 (MQ=255) aCGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCg < 1:5070/148‑1 (MQ=255) cgcgGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGc > 1:2549831/1‑148 (MQ=255) gcgAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGt > 1:3143039/1‑148 (MQ=255) aacaacGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTgg < 2:2621636/148‑1 (MQ=255) aacaacGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTgg < 2:2639940/148‑1 (MQ=255) acaacGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGa < 2:1546315/148‑1 (MQ=255) acaacGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGa < 2:1850341/148‑1 (MQ=255) acaacGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGa > 1:3065112/1‑148 (MQ=255) caacGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTCGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGAt > 1:224782/1‑148 (MQ=255) cGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGc > 1:1639138/1‑148 (MQ=255) gTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCt < 2:1239502/148‑1 (MQ=255) tATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCtt < 1:1875360/148‑1 (MQ=255) tATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCtt < 2:2203243/148‑1 (MQ=255) aTTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGACAGATGGATCGCttt > 1:2618213/1‑148 (MQ=255) ttGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTAc < 2:3384171/148‑1 (MQ=255) tGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACt < 2:1009254/148‑1 (MQ=255) ttttCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCg > 1:1470781/1‑148 (MQ=255) aCCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAg < 1:3432247/148‑1 (MQ=255) aCCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAg > 2:1185445/1‑148 (MQ=255) ccATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGc > 1:888745/1‑148 (MQ=255) cctGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCg < 2:408900/146‑1 (MQ=255) tGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCgag < 1:3244743/148‑1 (MQ=255) tGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCgag < 2:2340602/148‑1 (MQ=255) gggCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCgaga > 1:3355102/1‑148 (MQ=255) ggCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGGTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCgagag < 2:1908075/148‑1 (MQ=255) gCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCgagaga < 1:1827438/148‑1 (MQ=255) cGATCCACTGCTTGAGCGGGTTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGAt < 2:1457467/148‑1 (MQ=255) cGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGAt < 2:346983/148‑1 (MQ=255) cGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGAt < 1:2495870/148‑1 (MQ=255) cGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGAt < 1:706576/148‑1 (MQ=255) tCCACTGCTTGAGCGGGGTGTATTTCTCCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTg < 2:2187099/148‑1 (MQ=255) tCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTg > 1:1717646/1‑148 (MQ=255) tCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTg > 1:2222417/1‑148 (MQ=255) tCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTg > 2:664076/1‑148 (MQ=255) cACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGaa > 2:2492393/1‑148 (MQ=255) aCTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGaaa < 2:1699909/148‑1 (MQ=255) aCTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGaaa < 2:1700102/148‑1 (MQ=255) cTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAg < 1:123514/148‑1 (MQ=255) tGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAga > 1:3507946/1‑148 (MQ=255) tGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAga > 2:835256/1‑148 (MQ=255) gCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAgat < 2:223944/148‑1 (MQ=255) ggggTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGc < 1:3426319/148‑1 (MQ=255) gtgtATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCgg > 2:2088667/1‑148 (MQ=255) tgtATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGt < 1:958685/148‑1 (MQ=255) cGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGc < 2:3065112/148‑1 (MQ=255) cGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGc > 2:604411/1‑148 (MQ=255) gggCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGcc < 2:2558503/148‑1 (MQ=255) ggCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCa < 1:2769284/148‑1 (MQ=255) ggCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCa < 1:2925266/148‑1 (MQ=255) ggCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCa < 1:2927403/148‑1 (MQ=255) gACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCa < 2:525126/148‑1 (MQ=255) aCTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCaa < 2:2865593/148‑1 (MQ=255) cTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCaaa > 2:1790890/1‑148 (MQ=255) cTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCaaa > 1:1780684/1‑148 (MQ=255) cTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGc < 2:3250342/148‑1 (MQ=255) cTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGc > 2:2000602/1‑148 (MQ=255) ttCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCa > 2:3219959/1‑148 (MQ=255) aaaaaCGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGt < 2:805180/148‑1 (MQ=255) aaaCGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTAc > 2:1267301/1‑148 (MQ=255) aaaCGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTAc > 2:164900/1‑148 (MQ=255) aaCGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACa < 2:1303262/148‑1 (MQ=255) tAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGaaa < 2:1811866/148‑1 (MQ=255) tAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGaaa > 1:722292/1‑148 (MQ=255) aGGGCTTTTCGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAAc < 2:3040332/148‑1 (MQ=255) gggCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAAcc > 2:315400/1‑148 (MQ=255) gCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAACcag > 2:2225460/1‑148 (MQ=255) tttttGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAACcagca > 1:912899/1‑148 (MQ=255) tttGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAgg < 2:1627714/148‑1 (MQ=255) tttGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAgg > 2:967331/1‑148 (MQ=255) ttgttgCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAAACAGCAGGc < 1:3317745/148‑1 (MQ=255) ttgttgCTTATCACCAGCATACCCGAGTGGCTATAATCGGTATTGGTCGCCAGTTGGATCGCTTTACTTTGAGATGAGCGAGAGATCTGAAAGAGGATGTCGCCGGTTTGTGGCTGCCACGCAAAGGCAGGTACAGAAACAAGCAGGc > 1:1034523/1‑148 (MQ=255) gttgCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTg < 2:71750/148‑1 (MQ=255) ttgCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGa < 2:627455/148‑1 (MQ=255) tgCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAg > 2:1247216/1‑148 (MQ=255) cGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGa < 1:1341695/148‑1 (MQ=255) gTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGAt < 2:2132227/148‑1 (MQ=255) gTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGAt < 2:1639441/148‑1 (MQ=255) | CCAGTTTTTGCTGTTGTTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGAT > CP009273/4117513‑4117804 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |