| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,244,663 | G→T | 49.3% | H578N (CAC→AAC) | plsB ← | glycerol‑3‑phosphate O‑acyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,244,663 | 0 | G | T | 49.3% | 91.3 / 227.8 | 176 | H578N (CAC→AAC) | plsB | glycerol‑3‑phosphate O‑acyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (48/41); new base T (44/43); total (92/84) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 177 total aligned reads displayed.
TGCCGCCATCAGCGAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGATGCCAGTAGCGCAGTACA > CP009273/4244520‑4244810 | gccgccATCAGCGAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCTCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGa < 2:3527923/148‑1 (MQ=255) cgccATCAGCGAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATa < 1:217790/148‑1 (MQ=255) ccATCAGCGAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAg < 1:326052/148‑1 (MQ=255) cATCAGCGAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATaa > 1:353860/1‑146 (MQ=255) cATCAGCGAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATaa < 2:353860/146‑1 (MQ=255) aTCAGCGAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCt > 2:3430640/1‑148 (MQ=255) aGCGAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTcgc < 2:3097654/148‑1 (MQ=255) gCGAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTcgct > 1:1445881/1‑148 (MQ=255) cGAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTcgctg < 2:3269425/148‑1 (MQ=255) aaGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTcgctggc > 1:575985/1‑148 (MQ=255) ggCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTcgctggcgc > 2:575608/1‑148 (MQ=255) ggCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTcgctggcgc > 2:1944472/1‑148 (MQ=255) ggCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTcgctggcgc < 1:3222423/148‑1 (MQ=255) ggCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTcgctggcgc < 1:3223083/148‑1 (MQ=255) cagtaCCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGCCAGAATGATGATGTCGCCGATTGTGTCTTTATCGACTTCATACTTGTTCAGTTGCAGCGCGTTATCTATAAGATcgctggcgctg > 2:2683138/1‑148 (MQ=255) caCCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCgctggct < 1:703722/148‑1 (MQ=255) cAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGaa < 2:2383370/148‑1 (MQ=255) aCATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAgt > 1:2969193/1‑147 (MQ=255) aCATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAgg > 1:3341296/1‑148 (MQ=255) cATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGa < 1:2612820/148‑1 (MQ=255) cATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGa > 2:2500225/1‑148 (MQ=255) atatGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGaa > 1:1396458/1‑148 (MQ=255) atatGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGaa > 1:408199/1‑148 (MQ=255) tatGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAAc > 1:2341603/1‑148 (MQ=255) tatGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAAc < 1:3013518/148‑1 (MQ=255) atGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACg > 1:2853448/1‑148 (MQ=255) aaTGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATACGCTCGCTGGCGCTGGCTGAAGGAACGGTagag < 1:1969155/148‑1 (MQ=255) aaTGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTagag < 1:3405121/148‑1 (MQ=255) aTGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGt > 1:2742076/1‑148 (MQ=255) aTGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGt < 2:3003174/148‑1 (MQ=255) gttgttGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTcc < 2:841891/148‑1 (MQ=255) gttgttGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTcc > 1:2436712/1‑148 (MQ=255) cGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGt < 1:2734782/148‑1 (MQ=255) cGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGt < 2:600692/148‑1 (MQ=255) aTAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAg < 2:1672641/148‑1 (MQ=255) tagtagGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAgg > 2:1014350/1‑148 (MQ=255) tagtagGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGAGTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAgg > 2:3129249/1‑148 (MQ=255) agtagGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAggg > 2:1769495/1‑148 (MQ=255) gtagGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGc > 2:2877755/1‑148 (MQ=255) tagGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCa > 2:2895021/1‑148 (MQ=255) gTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGt > 2:325284/1‑148 (MQ=255) tcatcaGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTCGGGCACGtt > 2:3168082/1‑148 (MQ=255) tcatcaGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGtt > 2:2663754/1‑148 (MQ=255) catcaGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTg < 2:2014725/148‑1 (MQ=255) catcaGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTg > 1:833581/1‑148 (MQ=255) catcaGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTg < 1:1273977/148‑1 (MQ=255) catcaGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTg < 1:556593/148‑1 (MQ=255) catcaGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTg < 1:1089482/148‑1 (MQ=255) catcaGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTg > 2:1782734/1‑148 (MQ=255) catcaGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGCCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTg > 2:2223504/1‑148 (MQ=255) atcaGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTgc > 2:226016/1‑148 (MQ=255) gCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCAt < 2:2409347/148‑1 (MQ=255) cGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGa < 1:3084342/148‑1 (MQ=255) cGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGa < 1:1308678/148‑1 (MQ=255) cTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATc < 2:782926/148‑1 (MQ=255) ttGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATcc < 2:3134167/148‑1 (MQ=255) ttGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGGTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATcc > 1:385523/1‑148 (MQ=255) tGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCa > 1:2767911/1‑148 (MQ=255) tGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCa > 1:1685439/1‑148 (MQ=255) tCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGt < 2:1764498/148‑1 (MQ=255) cgcgGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGGCTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGc > 1:3302581/1‑148 (MQ=255) cgcgGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGc < 1:2727437/148‑1 (MQ=255) gcgGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCa < 2:3197076/148‑1 (MQ=255) cAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATcc > 2:18088/1‑136 (MQ=255) cAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATcc < 1:18088/136‑1 (MQ=255) aaTGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCagttgagt > 2:3056806/1‑148 (MQ=255) tgatgatgTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCagttgagttg < 1:3522736/148‑1 (MQ=255) gTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGtt > 1:78152/1‑148 (MQ=255) tCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTa < 2:1443607/148‑1 (MQ=255) tCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTa < 2:1445881/148‑1 (MQ=255) cGATTTTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCACGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTg > 2:571187/1‑148 (MQ=255) cGATTGTGTCTTTCTCGACTTCTAGCTTGTTCATTGGCAGCGCGTTATCGTTAAGCTCGCTGGCGCGGGGTGTAGGAACGGGTGAGTCGGGGGCGTAGGGCACGTTGCGCAGCAGATCCAGGTCGCGGGTGAGTTGCTCGGGTACCTg > 2:571042/1‑148 (MQ=255) cGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTg < 2:2066902/148‑1 (MQ=255) tgtgTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTcg > 2:3459516/1‑148 (MQ=255) tgtgTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTcg > 2:3459623/1‑148 (MQ=255) tgtgTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTcg > 2:505140/1‑148 (MQ=255) tCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCggg < 2:2853448/148‑1 (MQ=255) cTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGgt < 1:1660766/148‑1 (MQ=255) tctcGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGgtgag < 2:1540364/148‑1 (MQ=255) tcGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGgtgagtg > 1:2660281/1‑148 (MQ=255) aCTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAgc > 1:1508402/1‑148 (MQ=255) cTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAgcg > 1:494045/1‑148 (MQ=255) cTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAgcg < 1:3129249/148‑1 (MQ=255) ttCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAgcgc > 1:78741/1‑148 (MQ=255) cAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTg < 1:2122168/148‑1 (MQ=255) cAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTg < 1:325284/148‑1 (MQ=255) aCTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACg > 2:2622333/1‑148 (MQ=255) aCTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACg > 2:2252092/1‑148 (MQ=255) aCTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACg < 2:1949595/148‑1 (MQ=255) cTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGt < 2:2436890/148‑1 (MQ=255) ttGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTg > 1:2828923/1‑148 (MQ=255) tGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGa < 2:2534959/148‑1 (MQ=255) tGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGa < 1:252261/148‑1 (MQ=255) cATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGATGcc > 1:2849497/1‑148 (MQ=255) tttGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGATGCCAg > 1:826950/1‑148 (MQ=255) tttGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGATGCCAg < 1:2500225/148‑1 (MQ=255) tttGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGATGCCAg > 2:2118768/1‑148 (MQ=255) cgcgTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGATGCCAGTAGCGCa > 1:1268099/1‑148 (MQ=255) cgcgTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGATGCCAGTAGCGCa < 1:1208553/148‑1 (MQ=255) cgcgTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGATGCCAGTAGCGCa < 1:1205423/148‑1 (MQ=255) | TGCCGCCATCAGCGAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGATGCCAGTAGCGCAGTACA > CP009273/4244520‑4244810 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |