| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,358,920 | G→T | 100% | R147L (CGC→CTC) | fxsA → | suppressor of F exclusion of phage T7 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,358,920 | 0 | G | T | 98.4% | 583.5 / 0.6 | 185 | R147L (CGC→CTC) | fxsA | suppressor of F exclusion of phage T7 |
| Reads supporting (aligned to +/- strand): ref base G (3/0); new base T (77/105); total (80/105) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.91e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.66e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 186 total aligned reads displayed.
CTTTTATTGCCGCCGGTGCAAAAGCATCTGACAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGC > CP009273/4358775‑4359064 | cTTTTATTGCCGCCGGTGCAAAAGCATCTGACAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGctcg < 2:1082879/148‑1 (MQ=255) ttGCCGCCGGTGCAAAAGCATCTGACAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGcc > 1:863709/1‑148 (MQ=255) tGCCGCCGGTGCAAAAGCATCTGACAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCt > 1:78797/1‑148 (MQ=255) tGCCGCCGGTGCAAAAGCATCTGACAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCt > 2:2097457/1‑148 (MQ=255) gccgccGGTGCAAAAGCATCTGACAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCtt < 2:1448195/148‑1 (MQ=255) ccgccgGTGCACAAGCATCTGACAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATTATGAGCTCGACCGCCTTg < 2:1805454/148‑1 (MQ=255) cgccgGTGCAAAAGCATCTGACAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGa < 1:1206413/148‑1 (MQ=255) cgccgGTGCAAAAGCATCTGACAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGa < 1:348772/148‑1 (MQ=255) aaaGCATCTGACAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGAc > 1:1231815/1‑148 (MQ=255) aaGCATCTGACAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACg < 2:3537559/148‑1 (MQ=255) aaGCATCTGACAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACg > 2:2990593/1‑148 (MQ=255) aaGCATCTGACAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACg > 2:2990541/1‑148 (MQ=255) aGCATCTGACAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGa < 2:2003016/148‑1 (MQ=255) gCATCTGACAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTATCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGATTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGAt > 1:817879/1‑148 (MQ=255) gCATCTGACAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGAt < 1:36210/148‑1 (MQ=255) aTCTGACAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCg < 1:3118251/148‑1 (MQ=255) tCTGACAGTGAATTTGATGCCTCATTTGCTCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGTGACGGGTGTCGGTAATACTTTTGATGTTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGc < 1:3011818/148‑1 (MQ=255) tGACTGTGAAGTTGATGCCGCATTTGCGGTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCa < 2:2127823/148‑1 (MQ=255) aCAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAgg > 1:1839327/1‑148 (MQ=255) cAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTTTGTACCAGCGAATGGATGATGATCTCGACCGCCTTGATCATAAAGACGATCGCCAGGa < 2:1796921/148‑1 (MQ=255) cAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGa < 2:1797452/148‑1 (MQ=255) tGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTa < 1:340293/148‑1 (MQ=255) tGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTa < 2:1220834/148‑1 (MQ=255) tGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTa > 2:412429/1‑148 (MQ=255) gAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTaa < 2:316621/148‑1 (MQ=255) aaGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAAt > 1:2919297/1‑148 (MQ=255) aTGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGaa < 1:3215815/148‑1 (MQ=255) aTGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGaa > 2:1186145/1‑148 (MQ=255) aTGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGaa < 2:2030718/148‑1 (MQ=255) aTGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGaa < 1:2820030/148‑1 (MQ=255) gCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAAc > 2:1382522/1‑148 (MQ=255) aTTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCgg < 2:3269878/148‑1 (MQ=255) tGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGAtt > 1:3361803/1‑148 (MQ=255) gcTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTAtg < 1:190162/148‑1 (MQ=255) gcTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTAtg < 1:189551/148‑1 (MQ=255) cTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTAtgt > 1:1500714/1‑148 (MQ=255) ttttCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGTTGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTAtgtg > 1:1540076/1‑148 (MQ=255) ttttCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTAtgtg > 1:3127349/1‑148 (MQ=255) ttttCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTAtgtg < 2:2416990/148‑1 (MQ=255) ttCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGTATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGt < 1:256637/148‑1 (MQ=255) ttCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGt < 1:2056476/148‑1 (MQ=255) ttCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGt > 2:708230/1‑148 (MQ=255) tctcGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGtt < 2:3498632/148‑1 (MQ=255) gCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGc < 2:1286980/148‑1 (MQ=255) cgtGGGGGCGGTTTTAGCGGCGGGACGGGTGGGGGTTATTCTTTTGTTGGTGTGTACCAGGGTTTGGATGTTGAGCTCGTCGGGGTTGTTCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCAttt < 2:926005/146‑1 (MQ=255) ccTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGTTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCAttt < 2:2709090/148‑1 (MQ=255) ggcggcGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTcc < 1:879425/148‑1 (MQ=255) cggTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGt < 2:2169501/148‑1 (MQ=255) cggTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGt < 2:2169562/148‑1 (MQ=255) gTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGttt < 1:1695893/148‑1 (MQ=255) tttAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGttttt > 2:2976437/1‑148 (MQ=255) ttAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTc < 1:1010738/148‑1 (MQ=255) tAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCg > 1:1014337/1‑148 (MQ=255) aGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGt < 2:1877480/148‑1 (MQ=255) cgcCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGttt < 1:1186145/148‑1 (MQ=255) cgcCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGttt < 2:2919297/148‑1 (MQ=255) cgcCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGttt > 1:1669568/1‑148 (MQ=255) ggACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGgca > 1:1412929/1‑148 (MQ=255) ggACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGgca > 1:1107970/1‑148 (MQ=255) ggACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTAGTTTTGgca > 1:315856/1‑148 (MQ=255) cGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAACCGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCaa < 1:819977/148‑1 (MQ=255) cGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCaa > 1:3450118/1‑148 (MQ=255) ggCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGc < 2:3455975/148‑1 (MQ=255) gggttAATAGTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAAGGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGcc < 1:2690919/144‑1 (MQ=255) gCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGcc > 1:1281382/1‑148 (MQ=255) gCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGcc > 2:1874399/1‑148 (MQ=255) cGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCa < 1:1335508/148‑1 (MQ=255) cGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCa > 2:1473733/1‑148 (MQ=255) tAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATaa < 2:2491506/148‑1 (MQ=255) cTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCg > 2:3196082/1‑148 (MQ=255) ttttGATGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGc < 1:464224/148‑1 (MQ=255) aTGGTGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCa > 1:2417273/1‑148 (MQ=255) tGAGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGAt < 1:2456871/148‑1 (MQ=255) aGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCa > 2:556147/1‑148 (MQ=255) aGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCa > 1:486074/1‑148 (MQ=255) aGTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCa > 2:1294749/1‑148 (MQ=255) gTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAg > 2:1616012/1‑148 (MQ=255) gTACCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAg > 2:1337092/1‑148 (MQ=255) aCCAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAgcg < 1:2424191/148‑1 (MQ=255) ccAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAgcgc < 1:2172363/148‑1 (MQ=255) ccAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAgcgc > 2:872135/1‑148 (MQ=255) ccAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAgcgc < 1:1345632/148‑1 (MQ=255) ccAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGGTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCCgcgc > 1:1648546/1‑148 (MQ=255) cAGCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCa < 1:914248/148‑1 (MQ=255) gCGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATa > 2:876602/1‑148 (MQ=255) cGAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCATGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATag < 2:267337/148‑1 (MQ=255) cGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATAAGCGCATag > 1:1775893/1‑148 (MQ=255) gAAAGGATGATGCGCTCCACCGCATTGAACACAAAGACGCTCGCCAGTATTAATGTCGAACCGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATaga < 1:1596285/148‑1 (MQ=255) gAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATaga < 1:1597092/148‑1 (MQ=255) gAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATaga < 2:3170291/148‑1 (MQ=255) gAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATaga < 1:1597406/148‑1 (MQ=255) gAAAGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATaga < 1:637898/148‑1 (MQ=255) aaaGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATagag > 1:238203/1‑148 (MQ=255) aGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGAc > 1:156621/1‑148 (MQ=255) aGGATGATGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGAc > 2:1146447/1‑148 (MQ=255) gatgatGAGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGGCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACtt < 1:1983854/148‑1 (MQ=255) tgatgaGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACtttt < 2:3098194/148‑1 (MQ=255) tgatgaGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACtttt < 2:2474917/148‑1 (MQ=255) gatgaGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTc < 2:3416635/148‑1 (MQ=255) aGCTCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCCTAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGc > 2:838244/1‑148 (MQ=255) | CTTTTATTGCCGCCGGTGCAAAAGCATCTGACAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGC > CP009273/4358775‑4359064 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |