| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,525,234 | G→A | 100% | pseudogene (415/1029 nt) | yjhR → | pseudogene, helicase family; putative frameshift suppressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,525,234 | 0 | G | A | 100.0% | 794.4 / NA | 239 | pseudogene (415/1029 nt) | yjhR | pseudogene, helicase family; putative frameshift suppressor |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (141/98); total (141/98) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 239 total aligned reads displayed.
GCACTCCTTGCAGGGGGCGGAAAGGGCGATTGTTCTCTTTTCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCGATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGTTTCAGAAACGACAGGATTTAATTTCCGCACATACACAAATTTCAA > CP009273/4525089‑4525375 | gCACTCCTTGCAGGGGGCGGAAAGGGCGATTGTTCTCTTTTCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAat < 2:2082215/148‑1 (MQ=255) cTTGCAGGGGGCGGAAAGGGCGATTGTTCTCTTTTCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGAc < 2:38929/148‑1 (MQ=255) gCAGGGGGCGGAAAGGGCGATTGTTCTCTTTTCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCtt < 1:1125877/148‑1 (MQ=255) cAGGGGGCGGAAAGGGCGATTGTTCTCTTTTCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTa < 2:2162373/148‑1 (MQ=255) gggCGGAAAGGGCGATTGTTCTCTTTTCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCga < 1:3526398/148‑1 (MQ=255) gggCGGAAAGGGCGATTGTTCTCTTTTCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCga > 2:2205699/1‑148 (MQ=255) gCGGAAAGGGCGATTGTTCTCTTTTCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCgaga > 1:1748685/1‑148 (MQ=255) cGGAAAGGGCGATTGTTCTCTTTTCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGAt > 1:2006336/1‑148 (MQ=255) cGGAAAGGGCGATTGTTCTCTTTTCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGAt > 2:3084816/1‑148 (MQ=255) gggCGATTGTTCTCTTTTCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGcc < 2:3323114/148‑1 (MQ=255) aTTGTTCTCTTTTCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCAt < 2:2727444/148‑1 (MQ=255) ttGTTCTCTTTTCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCAtt > 2:478588/1‑148 (MQ=255) ttGTTCTCTTTTCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCAtt > 1:999472/1‑148 (MQ=255) tctcTTTTCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTcg > 1:2455779/1‑148 (MQ=255) ctTTTCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTcgccg > 1:1066315/1‑148 (MQ=255) ctTTTCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTcgccg > 1:1066962/1‑148 (MQ=255) tttCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCcgcg < 2:1224503/148‑1 (MQ=255) tttCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCcgcg < 2:2439601/148‑1 (MQ=255) tttCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCcgcg < 2:721691/148‑1 (MQ=255) tttCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTAAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTAATCGAGATGCAGCCCGCATTTTCGCcgcg > 2:133381/1‑148 (MQ=255) ttCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGa < 1:1372345/148‑1 (MQ=255) ctcCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAgg < 2:2700358/148‑1 (MQ=255) tcCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTACTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAggg > 1:2724722/1‑148 (MQ=255) tGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTa > 1:649421/1‑148 (MQ=255) tGTCGACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTa < 2:2515208/148‑1 (MQ=255) gTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTAt > 2:651426/1‑148 (MQ=255) gTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTAt < 1:1219273/148‑1 (MQ=255) gTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTAt > 1:3294140/1‑148 (MQ=255) tCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTAtt > 2:2585227/1‑148 (MQ=255) cTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTg > 2:3148020/1‑148 (MQ=255) cTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTg < 2:3483767/148‑1 (MQ=255) aCTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGc > 1:224049/1‑148 (MQ=255) cTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCa < 1:3056168/148‑1 (MQ=255) tCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGTTGCAGCCCGCATGTTCGCCGCGCGGGTGCTTGGCaa > 2:1120188/1‑148 (MQ=255) tCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCaa > 2:3251483/1‑148 (MQ=255) tCAAAACATGAAGATGGAAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGACTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGAATTTTCGCCGCGAGGGTTATTGGCaa > 1:1052471/1‑148 (MQ=255) aaaaCATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCaaaa > 2:1289138/1‑148 (MQ=255) acctGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAatat < 2:203533/145‑1 (MQ=255) aCATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAatat < 2:2005476/148‑1 (MQ=255) cATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATAtc < 1:2821331/148‑1 (MQ=255) cATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATAtc > 1:754354/1‑148 (MQ=255) gAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATctct < 2:1637914/148‑1 (MQ=255) gAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATctct > 2:1660417/1‑148 (MQ=255) gAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATctct > 2:1096516/1‑148 (MQ=255) gAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATctct > 1:1149926/1‑148 (MQ=255) aTGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTttc > 2:359016/1‑148 (MQ=255) gCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTttcttc > 1:846957/1‑148 (MQ=255) aGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAg < 1:1604440/148‑1 (MQ=255) ggTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGa > 2:703505/1‑148 (MQ=255) gTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGat > 2:2466413/1‑148 (MQ=255) tttCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGata < 1:1250181/148‑1 (MQ=255) tttCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGata < 2:630627/148‑1 (MQ=255) ttCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGataa < 2:1509628/148‑1 (MQ=255) cTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGataata > 2:2317747/1‑148 (MQ=255) ttGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGAtaataa > 2:1783166/1‑148 (MQ=255) gATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATg > 2:81852/1‑148 (MQ=255) gATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATg > 2:1195168/1‑148 (MQ=255) aTAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGc < 2:1561060/148‑1 (MQ=255) aTAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGc > 1:1684711/1‑148 (MQ=255) tAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCg < 1:2169189/148‑1 (MQ=255) tAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCg < 1:1878587/148‑1 (MQ=255) gCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGtt > 1:1400709/1‑148 (MQ=255) cAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCaa > 2:2841831/1‑148 (MQ=255) cAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCaa > 2:1010517/1‑148 (MQ=255) gCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAAtt > 2:2390798/1‑148 (MQ=255) cACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAAttt > 1:9135/1‑148 (MQ=255) cACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAAttt > 2:1053909/1‑148 (MQ=255) tATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAg > 1:201279/1‑148 (MQ=255) tCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGtt > 1:2318602/1‑148 (MQ=255) tCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGtt > 1:35837/1‑148 (MQ=255) ccTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGttt > 1:2565389/1‑148 (MQ=255) cTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGTTTc < 1:270241/148‑1 (MQ=255) tCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGTTTCa > 2:1883093/1‑148 (MQ=255) tCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGTTTCa > 2:3328855/1‑148 (MQ=255) tCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGTTTCa > 1:2994842/1‑148 (MQ=255) cAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGTTTCAg < 2:1804346/148‑1 (MQ=255) aaTGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCACTTTGAGTTTCAGa > 2:855018/1‑148 (MQ=255) tGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGTTTCAGAAACGa > 2:286973/1‑148 (MQ=255) tGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGTTTCAGAAACGACAg > 2:2114790/1‑148 (MQ=255) gTCTCACGCGCTAAAGATAGTTTTGTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCTTTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGTTTCAGAAACGACAgg < 2:1892998/148‑1 (MQ=255) tctcACGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGTTTCAGAAACGACAGGa > 2:2955538/1‑148 (MQ=255) aCGCGCTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGTTTCAGAAACGACAGGATTTa > 2:275567/1‑148 (MQ=255) cgcTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGTTTCAGAAACGACAGGATTTAAtt > 1:509076/1‑148 (MQ=255) cTAAAGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGTTTCAGAAACGACAGGATTTAATTTc > 1:709802/1‑148 (MQ=255) aaaGATTGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCTTTTTCGCCGCGTGGTTTATTGGAAAAATATCTCTTTTCTTCATATAATAATGCGTTGAAATTTGAGTTTCAGAAACGACAGGATTTAATTTCCg < 1:3148020/148‑1 (MQ=255) aGATAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGTTTCAGAAACGACAGGATTTAATTTCAGca > 1:1895805/1‑148 (MQ=255) aTAGTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGTTTCAGAAACGACAGGATTTAATTTCCGcaca > 1:1834692/1‑148 (MQ=255) tAGTTTTCTGGTATTTGGCAATATGGACCATATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGATGCACTTTGAGTTTCAGAAACGACAGGATTTAATTTCCGCACAt > 1:1016510/1‑148 (MQ=255) gTTTTCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGTGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGTTTCAGAAACGACAGGATTTAATTTCCGCACATac < 1:1500191/148‑1 (MQ=255) tCTGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCATATAATAATGCGTTGCAATTTGAGTTTCAGAAACGACAGGATTTAATTTCCGCACATACACaa < 2:3004842/148‑1 (MQ=255) gtgttttttGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGTGGGTTATTGGAAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGTGTTTCAGAAACGACAGGATTTAATTTCCGCACATACACaaa < 1:1885714/142‑1 (MQ=255) tGGTTTTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTTTTGGCAATATATCTCTTTTCTTCAGATATTAATGCGTTTAATTTTTAGTTTCAGAAACGACAGGATTTAATTTCCGCACATACACAAAt < 1:2363600/148‑1 (MQ=255) tGGTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGAATTTTCGCCGCGTGGGTTATTGGAAAAATATCTCTTTTCTTCATATAATAATGCGTTGAAATTTGATTTTCAGAAACGACAGGATTTAATTTCCGCACATACACAAAt < 1:537131/148‑1 (MQ=255) ggTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGTTTCAGAAACGACAGGATTTAATTTCCGCACATACACAAAtt > 2:418641/1‑148 (MQ=255) gTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCATATAATAATGCGTTGCAATTTGAGTTTCAGAAACGACAGGATTTAATTTCCGCACATACACAAAttt < 2:224049/148‑1 (MQ=255) gTATTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGTTTCAGAAACGACAGGATTTAATTTCCGCACATACACAAAttt > 1:3553558/1‑148 (MQ=255) aTTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGTTTCAGAAACGACAGGATTTAATTTCCGCACATACACAAATTTCa > 1:1976782/1‑148 (MQ=255) aTTTGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAAAAATGAGTTGCAATTTGAGTTTCAGAAACGACAGGATTTAATTTACTCACATACACAAATTTCa > 1:1976874/1‑148 (MQ=255) aTTTGGAAATATGGCCCTTATCGTGATGCAGCCCGCATTTTCGCCGCGAGGTTTTTTGGAAAAATATCTCTTTTCTTCATATAATAATGCGTTGAATTTTGAGTTTCAGAAACGACAGGATTTAATTTCCGCACATACACAAATTTCa < 1:440479/148‑1 (MQ=255) tttGGCAATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGTTTCAGAAACGACAGGATTTAATTTCCGCACATACACAAATTTCaa > 1:2054433/1‑148 (MQ=255) | GCACTCCTTGCAGGGGGCGGAAAGGGCGATTGTTCTCTTTTCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCGATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGTTTCAGAAACGACAGGATTTAATTTCCGCACATACACAAATTTCAA > CP009273/4525089‑4525375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |