| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 96,977 | C→A | 8.4% | H283N (CAT→AAT) | murG → | N‑acetylglucosaminyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 96,977 | 0 | C | A | 8.4% | 415.5 / 10.7 | 134 | H283N (CAT→AAT) | murG | N‑acetylglucosaminyl transferase |
| Reads supporting (aligned to +/- strand): ref base C (50/70); new base A (8/6); total (58/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 136 total aligned reads displayed.
GGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATGGCAGAAC > CP009273/96831‑97124 | ggCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTGAACa > 2:2990032/1‑148 (MQ=255)ggCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACa < 1:1171112/148‑1 (MQ=255)ggCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACa < 2:2287773/148‑1 (MQ=255)ggCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACa < 2:2287789/148‑1 (MQ=255) cGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGa < 1:543764/148‑1 (MQ=255) cGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAAAATaaata > 2:1094226/1‑146 (MQ=255) gcagcaTAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGAc < 2:1973097/148‑1 (MQ=255) gcagcaTAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAAAATAAAGAc < 2:1659437/148‑1 (MQ=255) cagcaTAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGG‑GCCGGTTCAACCAAAAGAcc > 2:319999/1‑148 (MQ=255) cagcaTAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAAAGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTTT‑TGCGGTTGAACATaaataac > 1:2815635/1‑144 (MQ=255) cagcaTAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGGTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTGTTTTGT‑GGCGGTTGAAAAAAAATAca > 1:1034613/1‑147 (MQ=255) gcaTAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAATACCGc > 2:823824/1‑148 (MQ=255) gcaTAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACAAAAAGACCGc > 2:2610799/1‑148 (MQ=255) caTAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAAAAAAAAGAACGcc > 2:1626882/1‑148 (MQ=255) caTAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATAGCCGCGGCAGGACTACCGGCGTTGGTTGT‑GCCGTTTAAAAAGAAAGAACGcc > 2:3367531/1‑148 (MQ=255) tAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTTCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACAAAAATAACGCCac > 1:877106/1‑147 (MQ=255) aaaGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTAAACATAAAGACCGCCAGc > 2:745776/1‑148 (MQ=255) gTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAAt < 2:62256/148‑1 (MQ=255) gACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAAAATAAAGACCGCCAGCAATAc < 1:1178473/148‑1 (MQ=255) tttATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAAAATAAAGACCGCCCGCAAAACTGGAAtt > 2:2588406/1‑147 (MQ=255) tATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATgcg < 2:1699346/148‑1 (MQ=255) tATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATgcg < 1:3227538/148‑1 (MQ=255) atgatATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCCAAACTGGAATGCGCTccc > 2:1695083/1‑148 (MQ=255) atatGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCt > 2:2512382/1‑148 (MQ=255) cggcggcgTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGaaaa < 1:381384/148‑1 (MQ=255) gcggcgTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAg < 1:3166180/148‑1 (MQ=255) gcggcgTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAAAACTGGAATGCGCGACCCCGGGaaaaat > 2:2702541/1‑147 (MQ=255) ggcgTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCg < 1:3086813/148‑1 (MQ=255) ggcgTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCg < 1:3086886/148‑1 (MQ=255) gcgTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCgg < 1:3550886/148‑1 (MQ=255) gCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAg < 1:3093292/148‑1 (MQ=255) ggCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGGTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCgccgcccac > 2:2329055/1‑145 (MQ=255) gCGGATGTCGTCGTTTGCCGCTCCGGGGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACAAAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCcaaa > 2:1461886/1‑148 (MQ=255) gATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTa < 1:3841/148‑1 (MQ=255) gtcgtcGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCg < 2:2045285/148‑1 (MQ=255) gtcgtcGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCg < 2:2045469/148‑1 (MQ=255) gtcgtcGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAAAATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCg < 2:3107944/148‑1 (MQ=255) tcgtcgTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCCGGACTACCGGCGTTGTTTTTGGCCGTTT‑AACAAAAAAAACCCCCCCAAAACAGGAAATCGCGACCCCGGGGAAAAACCGGCGCAGCCcaaaaaataga > 1:2276672/1‑141 (MQ=255) tcgtcgTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCCTTTCAACATAAATACCGCCAGCAAAACTGGTAATCGCTAACCCTGGAAAAAGCGGGCGCAGCCCAAATTATCGa > 1:2939897/1‑148 (MQ=255) cgtcgtTTGCCGCTCCGGTGCTTTAACGGTGAGTGAAATCGCCGCTGCAGGACTACCGTCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGag < 2:1630262/148‑1 (MQ=255) cgtTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATAATGGAATGCGCTAACGCTGGAAAAAGCGGGCGCAGCCCAAATTATAGagcag > 1:3160662/1‑148 (MQ=255) gtTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGagcagc < 1:3290689/148‑1 (MQ=255) gCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCcaca < 2:294685/148‑1 (MQ=255) gCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCt < 2:3142465/148‑1 (MQ=255) gCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCCCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCt > 1:1496341/1‑148 (MQ=255) cTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCtt < 2:3497244/148‑1 (MQ=255) gTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACGGGCGTTTTTTGT‑TCCGTTTCAACATAAAGACCGCCAGCAATAATGTAATGCGCTACCGCTGTAAAAAGCGGGCGCAGACAAAATTATCGAGCAGCCACAGCTTAGCGt < 1:356797/148‑1 (MQ=255) tGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATTCGCTACCGCTGGCAAAAGCGGGCGCAGCCAAAATTATAGAGCAGCCACAGCTTAGCGTg > 2:1568023/1‑148 (MQ=255) tGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTg > 2:178021/1‑148 (MQ=255) gCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTgg < 2:2089518/148‑1 (MQ=255) gCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTgg < 2:835404/148‑1 (MQ=255) cGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGa < 2:3196950/148‑1 (MQ=255) ttAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATg < 1:3319697/148‑1 (MQ=255) ttAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATg < 1:3319756/148‑1 (MQ=255) tAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGc > 2:242825/1‑148 (MQ=255) cGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATTCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGTTGCTGt > 1:2668662/1‑148 (MQ=255) cGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGt < 1:1407607/148‑1 (MQ=255) agtgaAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCa < 2:2248447/148‑1 (MQ=255) aaTCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACAcc < 2:384674/148‑1 (MQ=255) aTCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACAccc < 1:1014267/148‑1 (MQ=255) tCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGAACGCCAGCAATACTGGAATGCGCTACCGCTGGTAAAAGCGGGCGCAGCCAAAAATATCGAGCAGCCACAGCTTAGCGTGGGTGCTGTCGCCAACCCCCt > 1:587519/1‑148 (MQ=255) tCGCCGCGGCAGGACTACCGGCGTGGTTTGT‑GCCGTTTAAACATAAAAACCGCCAGCAAAAATGGAATTCGCTACCGCGGGAAAAAACGGGCGCAGCCAAAATTATAGAGCAGCCACAGCGTAGCGTGGTTTCTGTGGCCAAAACCCt > 1:1084365/1‑148 (MQ=255) cgccgcGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTAAACATAAATACCCCCAGCAAAACTGGAAAGCGCTACCCCGGGCAAAAGCGGGCGCAGCCCAAATTATCGAGCAGCCACACCTTATCGTGGGTGCTGTCGCCCACAcccgg > 1:2545420/1‑146 (MQ=255) gccgcGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTgg < 1:164251/148‑1 (MQ=255) gccgcGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTgg < 2:138273/148‑1 (MQ=255) gccgcGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTgg < 1:164304/148‑1 (MQ=255) cgGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCCGCAATACTGGAATTCGCTACCGCGGGAAAAAGCGGGCGCAGCCCAAATTATCGAGCCGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCGGGCCgg > 1:1802551/1‑148 (MQ=255) cgGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCCCCAGCAAAACTTGAATGCGCTACCGCTGGAAAAAGCGGGCGCCGCCAAAAATATCGAGCAGCCCCAGCTTAGCGTGGTTGCTGTCGCCAACACCCAGGCCgg > 1:1802527/1‑148 (MQ=255) ggCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCggg < 2:2643518/148‑1 (MQ=255) gCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGggt < 1:856268/148‑1 (MQ=255) cAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGggtg > 2:520211/1‑148 (MQ=255) aGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGggtgg < 1:2990032/148‑1 (MQ=255) aCCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCga < 1:1692313/148‑1 (MQ=255) ggCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGaa < 1:569873/148‑1 (MQ=255) gCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGaaa > 2:2893320/1‑148 (MQ=255) gCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGaaa > 1:2872118/1‑148 (MQ=255) gttgttTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTTTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAAcc < 2:38682/148‑1 (MQ=255) gttgttTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAAcc < 2:2083911/148‑1 (MQ=255) gttgttTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAAcc < 2:3389912/148‑1 (MQ=255) gttgttTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAAcc < 2:1842003/148‑1 (MQ=255) ttgtttgt‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCt > 2:2789183/1‑148 (MQ=255) ttgtttgt‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCt > 2:2789017/1‑148 (MQ=255) ttgtttgt‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCt > 1:2470288/1‑148 (MQ=255) ttgtttgt‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCt > 1:2470291/1‑148 (MQ=255) ttgtttgt‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCt > 2:1891853/1‑148 (MQ=255) gtttgt‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCtta < 2:3434867/148‑1 (MQ=255) gtttgt‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCtta < 2:1069501/148‑1 (MQ=255) tgt‑gCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTTGCGAGAAACCttatta < 1:2896900/148‑1 (MQ=255) gt‑gCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTaa < 2:600675/148‑1 (MQ=255) gt‑gCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTaa < 2:600670/148‑1 (MQ=255) gCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAAcc > 2:1138594/1‑148 (MQ=255) gCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAAcc > 2:1021691/1‑148 (MQ=255) gCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAAcc > 2:1022146/1‑148 (MQ=255) cGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCAt > 1:2270938/1‑148 (MQ=255) cGTTTCAACATAAAGACCGACAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCAt > 2:2887230/1‑148 (MQ=255) tttCAACATAAAGACCGCCAGCAATACTGGAATGTGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATgg > 1:2947016/1‑148 (MQ=255) ttCAAAATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATGGc < 1:2454758/148‑1 (MQ=255) aCATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATGGCAGaa > 2:3035977/1‑148 (MQ=255) cATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATGGCAGAAc > 2:443135/1‑148 (MQ=255) cATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATGGCAGAAc > 2:92659/1‑148 (MQ=255) | GGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATGGCAGAAC > CP009273/96831‑97124 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |