| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 925,957 | A→T | 5.4% | I154I (ATT→ATA) | cydD ← | fused glutathione, cysteine exporter subunits of ABC superfamily: membrane component/ATP‑binding component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 925,957 | 0 | A | T | 5.4% | 568.9 / 17.7 | 184 | I154I (ATT→ATA) | cydD | fused glutathione, cysteine exporter subunits of ABC superfamily: membrane component/ATP‑binding component |
| Reads supporting (aligned to +/- strand): ref base A (68/106); new base T (3/7); total (71/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.00e-01 | |||||||||||
Only 100 of 185 total aligned reads displayed.
CCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTG > CP009273/925811‑926100 | ccACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACaa < 2:2660895/148‑1 (MQ=255) cTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACTATCa > 2:1509439/1‑148 (MQ=255) cTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCa < 1:9663/148‑1 (MQ=255) tAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGc < 1:689418/148‑1 (MQ=255) tAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGc > 2:1211894/1‑148 (MQ=255) tAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTGAGAGGGGAAGATTGCCACCACAATCAGc > 2:1211918/1‑148 (MQ=255) gCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAAc > 1:2157724/1‑148 (MQ=255) cGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACg > 1:1878229/1‑148 (MQ=255) gCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCa < 1:1386864/148‑1 (MQ=255) gCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCa < 2:1349871/148‑1 (MQ=255) gCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACAACAATCAGCAACGGCa > 2:3304011/1‑148 (MQ=255) cAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCAc < 1:1920254/148‑1 (MQ=255) cAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCAc < 1:1920258/148‑1 (MQ=255) gCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGaca < 1:3508833/148‑1 (MQ=255) gCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGaca > 2:3512934/1‑148 (MQ=255) gCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGaca < 2:489048/148‑1 (MQ=255) cGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGacac > 2:2913534/1‑148 (MQ=255) gaAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGc > 1:1736702/1‑148 (MQ=255) gaAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGc > 1:475731/1‑148 (MQ=255) aaaGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGcc < 2:862258/148‑1 (MQ=255) aGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAg > 2:1934901/1‑148 (MQ=255) aGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAg > 2:2360537/1‑148 (MQ=255) ttACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAgcg > 1:3436071/1‑148 (MQ=255) cGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCa < 1:2780211/148‑1 (MQ=255) cGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCa < 2:481453/148‑1 (MQ=255) gTCGTTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCAt < 1:1206601/148‑1 (MQ=255) cGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCAttt < 1:1196035/148‑1 (MQ=255) tAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCgg < 1:2611751/148‑1 (MQ=255) aGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGc > 1:1020272/1‑148 (MQ=255) gCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCa > 2:1919979/1‑148 (MQ=255) aTCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACTATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGa < 1:2380446/148‑1 (MQ=255) aTCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGa < 2:79237/148‑1 (MQ=255) tCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGAt < 2:381634/148‑1 (MQ=255) tCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGAt < 2:1833198/148‑1 (MQ=255) cGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATa > 1:3208172/1‑148 (MQ=255) aGCCCCCAGTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGt < 2:1824167/148‑1 (MQ=255) gCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTg < 2:3092618/148‑1 (MQ=255) cccccATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGc > 1:1502555/1‑148 (MQ=255) cccccATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGc < 1:644986/148‑1 (MQ=255) cccccATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGGGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGc < 2:2349719/148‑1 (MQ=255) cccATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCAt > 2:3435999/1‑148 (MQ=255) cccATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCAt > 2:3436037/1‑148 (MQ=255) ccAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAAt > 2:581197/1‑148 (MQ=255) aCCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCAt > 1:452397/1‑148 (MQ=255) aCCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCAt > 1:2847177/1‑148 (MQ=255) cAGCGCCATAAACAACGGAATTAACTGTGCAGTGCCAAGCATAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGc < 2:1642650/148‑1 (MQ=255) cAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCATCGCCATTTGCGTCATATAGCGTGCATAGTAATCATGc < 2:1642584/148‑1 (MQ=255) cAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGc < 1:138205/148‑1 (MQ=255) gcgcCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCat < 2:754432/148‑1 (MQ=255) cgcCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCata > 2:1479378/1‑148 (MQ=255) gcCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCatat < 2:2175221/148‑1 (MQ=255) ccATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATc > 1:821565/1‑148 (MQ=255) aaaCAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCa > 2:1180749/1‑148 (MQ=255) aaaCAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCa < 2:2792655/148‑1 (MQ=255) aacaacGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCaa < 1:3493465/148‑1 (MQ=255) acaacGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAAt < 1:1963843/148‑1 (MQ=255) cGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGc < 1:3062408/148‑1 (MQ=255) aTTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGa < 2:1153946/148‑1 (MQ=255) aTTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGa < 1:3287124/148‑1 (MQ=255) aCGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTAc < 1:2206231/148‑1 (MQ=255) aCGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTAc < 1:2478858/148‑1 (MQ=255) aCGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTAc < 1:504152/148‑1 (MQ=255) cGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACACTCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTAcc < 2:968784/148‑1 (MQ=255) cGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTAcc < 2:394144/148‑1 (MQ=255) cGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTAcc > 1:2921527/1‑148 (MQ=255) gCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCg < 2:2411193/148‑1 (MQ=255) gCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCg < 2:2411146/148‑1 (MQ=255) cAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGt < 2:3362572/148‑1 (MQ=255) cAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGt < 2:3227649/148‑1 (MQ=255) tGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGc > 1:1145434/1‑148 (MQ=255) cccAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGccc < 2:2823706/148‑1 (MQ=255) cagcagAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAg > 1:2280455/1‑148 (MQ=255) cagcagAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAg > 2:3290262/1‑148 (MQ=255) cagcagAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAg > 1:486446/1‑148 (MQ=255) agAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACTATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTcc < 2:2219541/148‑1 (MQ=255) agAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACTATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTcc < 2:1324723/148‑1 (MQ=255) gAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGTCACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTccc < 1:3304011/148‑1 (MQ=255) gAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTccc > 2:363617/1‑148 (MQ=255) gAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTccc < 2:3168134/148‑1 (MQ=255) aaTGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTcccc > 2:1625600/1‑148 (MQ=255) gcgcCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAgg > 2:2100799/1‑148 (MQ=255) gcgcCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAgg < 1:3342550/148‑1 (MQ=255) gcgcCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAgg < 1:3342590/148‑1 (MQ=255) cgccgcAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGt < 1:1312735/148‑1 (MQ=255) gccgcAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGtt < 1:458875/148‑1 (MQ=255) cAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTAcc > 1:2095406/1‑148 (MQ=255) cAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTAcc > 1:2042905/1‑148 (MQ=255) gCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCt > 2:839126/1‑148 (MQ=255) ccAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGa < 1:2948596/148‑1 (MQ=255) ccAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGa < 1:3512934/148‑1 (MQ=255) cAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGaa < 1:2913534/148‑1 (MQ=255) cAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGaa < 1:3371627/148‑1 (MQ=255) tAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCa > 2:3320397/1‑148 (MQ=255) gagGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACg > 1:1297417/1‑148 (MQ=255) gagGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACg < 2:3208172/148‑1 (MQ=255) ttGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGc < 1:384055/148‑1 (MQ=255) ttGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGc < 1:595224/148‑1 (MQ=255) ttGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGc < 1:1479378/148‑1 (MQ=255) accacAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCttgtt < 2:3056141/148‑1 (MQ=255) ccacAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCttgttg > 1:1450690/1‑148 (MQ=255) | CCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAGGGGAAGATTGCCACCACAATCAGCAACGGCACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTG > CP009273/925811‑926100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |