| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,137,384 | G→T | 100% | R814S (CGC→AGC) | rne ← | fused ribonucleaseE: endoribonuclease/RNA‑binding protein/RNA degradosome binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,137,384 | 0 | G | T | 99.3% | 464.2 / ‑5.6 | 143 | R814S (CGC→AGC) | rne | fused ribonucleaseE: endoribonuclease/RNA‑binding protein/RNA degradosome binding protein |
| Reads supporting (aligned to +/- strand): ref base G (0/2); new base T (61/80); total (61/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.07e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 151 total aligned reads displayed.
TTCGCGCTGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCGACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTGCAGTTTGCGCTACGACTGGCAGCGGGACTTTCA > CP009273/1137241‑1137527 | ttCGCGCTGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGctacga > 2:2726978/1‑148 (MQ=255) tCGCGCTGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGctacgac > 1:3528018/1‑148 (MQ=255) tCGCGCTGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGctacgac > 2:3017440/1‑148 (MQ=255) gcgcTGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGctacgacga < 2:479900/148‑1 (MQ=255) gcgcTGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGctacgacga < 2:2274225/148‑1 (MQ=255) cgcTGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCtacgacgac > 2:2073964/1‑148 (MQ=255) gctgctCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTGTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTacgacgacg < 2:2877524/148‑1 (MQ=255) gctCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTg < 1:1417676/148‑1 (MQ=255) gctCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTg > 1:1781456/1‑148 (MQ=255) ttCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCa < 2:1077916/148‑1 (MQ=255) tCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCAc > 2:3212574/1‑148 (MQ=255) tCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCAc > 2:1947436/1‑148 (MQ=255) tCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCAc < 1:2462591/148‑1 (MQ=255) aaCCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACtt < 2:2749568/148‑1 (MQ=255) aaCCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACtt < 2:2749114/148‑1 (MQ=255) aaCCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACtt < 2:3397144/148‑1 (MQ=255) ccTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTAc > 1:1076992/1‑148 (MQ=255) ccTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTAc > 1:2851212/1‑148 (MQ=255) tACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACgcgc > 1:408727/1‑148 (MQ=255) tACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACgcgc > 2:3337790/1‑148 (MQ=255) aTCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAgg < 1:1928833/148‑1 (MQ=255) gCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACg < 2:2466726/148‑1 (MQ=255) gCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACg < 1:2678172/148‑1 (MQ=255) gCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACg < 1:522657/148‑1 (MQ=255) gACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAgg > 1:1258064/1‑148 (MQ=255) aaTTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAgcgg > 1:3513593/1‑148 (MQ=255) ttGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAgcggcg < 2:2717680/148‑1 (MQ=255) ttGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAgcggcg > 2:2896670/1‑148 (MQ=255) ttGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAgcggcg > 1:421762/1‑148 (MQ=255) gATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCgaga > 2:1686705/1‑148 (MQ=255) aTAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGaa > 1:1741438/1‑148 (MQ=255) aTAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGaa > 1:3503888/1‑148 (MQ=255) aGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAacg < 1:922027/148‑1 (MQ=255) aGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGCTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAacg < 1:922088/148‑1 (MQ=255) gCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAacga < 1:1867950/148‑1 (MQ=255) gCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAacga < 1:1480386/148‑1 (MQ=255) cGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACCTACGCGCAGGTGACGAGGCGAGCGGCGAGAacgac > 2:633180/1‑148 (MQ=255) gATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGAcgc > 2:846193/1‑148 (MQ=255) tCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCgg < 2:3221494/148‑1 (MQ=255) ccAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGc < 1:2862928/148‑1 (MQ=255) tcTTTGCTAGAGTGCTGTTCCTGAGACGCGCAGGCTAAGGTCTTCGTCATTTGCGACTGTGTTTGTTATCGTTCTTCACTTTAGCTACTACTAGGCTGTCCAATTACGAGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGc < 2:1478579/147‑1 (MQ=255) aCTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGc > 1:2056848/1‑148 (MQ=255) tttGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCa < 1:3095938/148‑1 (MQ=255) ttGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCAc > 1:1600741/1‑148 (MQ=255) ttGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCAc > 1:1600746/1‑148 (MQ=255) gCCAGTGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGAATTGGCTACTGGGTTGGAGAACGCTCGTCACGATCGCTACGTCGTCGCTGACCACTTACGCGCAGGTGACGAGGCGATCGGCGAGAACGTCGCGGCATGCCACCg < 2:3187018/148‑1 (MQ=255) gCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCg < 2:3187205/148‑1 (MQ=255) ccAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCTTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGt < 2:2995766/148‑1 (MQ=255) ccAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGt > 2:1032956/1‑148 (MQ=255) agagGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTg > 2:3401117/1‑148 (MQ=255) agGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTc > 1:224440/1‑148 (MQ=255) ggCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCa < 2:3546106/148‑1 (MQ=255) cAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACgg < 1:1439122/148‑1 (MQ=255) ttCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTa > 1:482530/1‑148 (MQ=255) tCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTAt < 1:3309804/148‑1 (MQ=255) ccGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATc < 2:1615841/148‑1 (MQ=255) cGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCa < 2:635574/148‑1 (MQ=255) gagaCGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCTTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGc > 1:2118447/1‑148 (MQ=255) gagaCGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGc > 2:903433/1‑148 (MQ=255) agaCGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCa > 2:883069/1‑148 (MQ=255) gcACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTtc < 1:474957/148‑1 (MQ=255) aCGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTtctc < 2:2450941/148‑1 (MQ=255) aCGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTtctc < 2:158154/148‑1 (MQ=255) aCGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTtctc > 1:2787538/1‑148 (MQ=255) gCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCCGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCtctt < 1:3302858/148‑1 (MQ=255) cTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCtcttc < 2:903405/148‑1 (MQ=255) cTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCtcttc < 1:3293016/148‑1 (MQ=255) tACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCtcttct > 2:526167/1‑148 (MQ=255) tACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCtcttct < 1:1479681/148‑1 (MQ=255) tACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCtcttct < 2:2595554/148‑1 (MQ=255) cGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTg < 2:1268387/148‑1 (MQ=255) tCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTg > 2:280975/1‑148 (MQ=255) tCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTg < 1:1947436/148‑1 (MQ=255) cAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGt < 1:1686497/148‑1 (MQ=255) aaCGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGtt < 2:338069/148‑1 (MQ=255) aCGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTc > 2:432815/1‑148 (MQ=255) cGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCt > 1:1453771/1‑148 (MQ=255) aTTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTg > 2:2946840/1‑148 (MQ=255) gccaCTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGAAGAGGCGAGCGCCGAGAACGAAGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTACTGTTGCAGt > 2:2156111/4‑148 (MQ=255) gCGACTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTGCAGt > 2:2155983/1‑148 (MQ=255) aCTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTGCAGTTTg < 2:1371017/148‑1 (MQ=255) aCTGGGTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTGCAGTTTg > 2:892885/1‑148 (MQ=255) ggTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTGCAGTTTGCGCt < 1:563884/148‑1 (MQ=255) ggTTGGATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTGCAGTTTGCGCt < 1:2946840/148‑1 (MQ=255) ggATAACGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTGCAGTTTGCGCTACGa < 1:2446935/148‑1 (MQ=255) aTAACGCTCGTCACGAGAGCGACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTGCAGTTTGCGCTACGACt < 2:2357363/148‑1 (MQ=255) aaCGCTCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTGCAGTTTGCGCTACGACTgg < 2:1600746/148‑1 (MQ=255) tCGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCGTCTTGCTGTTCTGGTGCAGTTTGCGCTACGACTGGCAGCg < 1:2727015/148‑1 (MQ=255) cGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTGCAGTTTGCGCTACGACTGGCAGCgg < 2:37885/148‑1 (MQ=255) cGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTGCAGTTTGCGCTACGACTGGCAGCgg < 1:752516/148‑1 (MQ=255) cGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTGCAGTTTGCGCTACGACTGGCAGCgg < 1:1054364/148‑1 (MQ=255) cGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTGCAGTTTGCGCTACGACTGGCAGCgg > 2:525156/1‑148 (MQ=255) cGTCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTGCAGTTTGCGCTACGACTGGCAGCgg > 1:1837595/1‑148 (MQ=255) gTCACGATAGCTACGACGACGCTGACCACCTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTGCAGTTTGCGCTACGACTGGCAGCggg < 1:633180/148‑1 (MQ=255) tCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTGCAGTTTGCGCTACGACTGGCAGCGGGa > 1:877772/1‑148 (MQ=255) tCACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTGCAGTTTGCGCTACGACTGGCAGCGGGa > 1:2726071/1‑148 (MQ=255) cACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTGCAGTTTGCGCTACGACTGGCAGCGGGAc < 1:3337790/148‑1 (MQ=255) cACGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTGCAGTTTGCGCTACGACTGGCAGCGGGAc < 2:1781456/148‑1 (MQ=255) cACGATAGCGACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTGCAGTTTGCGCTACGACTGGCAGCGGGAc < 2:2645018/148‑1 (MQ=255) cGATAGCTACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTGCAGTTTGCGCTACGACTGGCAGCGGGACtt < 1:2896670/148‑1 (MQ=255) | TTCGCGCTGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACGGTCAACGGCATTGGCGACTGGGTTGGATAACGCTCGTCACGATAGCGACGACGACGCTGACCACTTACGCGCAGGTGACGAGGCGAGCGGCGAGAACGACGCGGCATGCCACCGTTGTCACGGTTATCAGCATTGTTCTCTTCTTGCTGTTCTGGTGCAGTTTGCGCTACGACTGGCAGCGGGACTTTCA > CP009273/1137241‑1137527 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |