| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,558,685 | G→T | 100% | R436S (CGC→AGC) | dosP ← | oxygen sensor, c‑di‑GMP phosphodiesterase, heme‑regulated; cold‑ and stationary phase‑induced bioflim regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,558,685 | 0 | G | T | 98.4% | 598.9 / 0.7 | 190 | R436S (CGC→AGC) | dosP | oxygen sensor, c‑di‑GMP phosphodiesterase, heme‑regulated; cold‑ and stationary phase‑induced bioflim regulator |
| Reads supporting (aligned to +/- strand): ref base G (2/1); new base T (97/90); total (99/91) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 191 total aligned reads displayed.
CAATCATTATCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCGATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTAT > CP009273/1558538‑1558828 | cAATCATTATCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCGTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTAACGAAAGCg > 1:2447019/1‑148 (MQ=255) cATTATCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTg < 1:2290551/148‑1 (MQ=255) ttATCGGCTTGCTGACCACAGTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGAc < 2:3449294/148‑1 (MQ=255) aTCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCa < 1:2236662/148‑1 (MQ=255) aTCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCa < 2:2373690/148‑1 (MQ=255) tCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCAc < 2:3425172/148‑1 (MQ=255) cGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACt > 2:227609/1‑148 (MQ=255) cTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTcc < 1:3544139/148‑1 (MQ=255) gCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGc > 2:1217325/1‑148 (MQ=255) gACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGTCCACTTCCAGCAAt > 1:950146/1‑148 (MQ=255) gACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAAt > 2:1432692/1‑148 (MQ=255) ccACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACCGAGCTACTGATCCGGGTTGAGTTTTTGACGAAAGCTATTGACCACTTCCAGCAATGc > 1:1518895/1‑148 (MQ=255) acaTTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCt > 1:222349/1‑148 (MQ=255) ttCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGAt > 1:3500018/1‑148 (MQ=255) tCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATc > 1:893504/1‑148 (MQ=255) cGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCgg > 2:1343093/1‑148 (MQ=255) gTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGc < 1:3328148/148‑1 (MQ=255) tAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTTACCACTTCCAGCAATGCCTGATCGGcc > 1:1453386/1‑148 (MQ=255) tAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGcc < 1:2503560/148‑1 (MQ=255) gCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCa < 1:2694030/148‑1 (MQ=255) gCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCa > 1:1485501/1‑148 (MQ=255) gCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCGATTGACCACTTCCAGCAATGCCTGATCGGCCCa > 2:3182802/1‑148 (MQ=255) cATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTTAACACATCCAGCAATGCCTGATAGGCCCACGc > 1:2185630/1‑148 (MQ=255) aTCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGATGCACACCAGGACAAAATGCGTACCTTCGATACCACACAGATACTGATCCTGTTTGAGTTTTTCACGAAAGCTATTGACCACATCCATCAAAGCCTGATCGGCCCACGCa > 1:2938761/1‑148 (MQ=255) aTCGGCGATTTGGGTAATGTTACTGACGTCGTTTTAGAGGCTCACGAGGACAAACTGCGTACCATCGATACGACAGAGATACTGATACGGTTTGAGTTTTTAACGAAAGCTATTTACCACTTCCAGCAAAGCCTGATCGGcccaccca > 1:638548/1‑148 (MQ=255) tCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCAt > 2:2234007/1‑148 (MQ=255) tCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCAt > 2:2233607/1‑148 (MQ=255) gCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGc > 2:79357/1‑148 (MQ=255) aTTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCaa > 2:1350259/1‑148 (MQ=255) tttGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAg > 1:2554509/1‑148 (MQ=255) tttGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAg > 1:1012021/1‑148 (MQ=255) tttGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAg > 1:1012056/1‑148 (MQ=255) ttGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAgg < 2:384076/148‑1 (MQ=255) ggTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTa > 2:507192/1‑148 (MQ=255) gTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTat < 1:936793/148‑1 (MQ=255) gTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTat < 1:921070/148‑1 (MQ=255) aaTGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTatca > 2:609998/1‑148 (MQ=255) gTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTatcaatc > 1:1829780/1‑148 (MQ=255) gTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTatcaatc < 1:1143988/148‑1 (MQ=255) ttACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTatcaatca < 2:1134380/148‑1 (MQ=255) ttACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTatcaatca < 1:1755482/148‑1 (MQ=255) ttACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTatcaatca > 1:2262404/1‑148 (MQ=255) tACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATcac < 2:2231851/148‑1 (MQ=255) aCTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATcaca > 2:2727150/1‑148 (MQ=255) cTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACAt < 1:3230246/148‑1 (MQ=255) cTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACAt < 1:3230194/148‑1 (MQ=255) tGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATc > 1:1395617/1‑148 (MQ=255) tGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATc < 2:2157123/148‑1 (MQ=255) tGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATc > 2:1510905/1‑148 (MQ=255) cgtcgtTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTg < 1:477986/148‑1 (MQ=255) gtcgtTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGa < 2:3511955/148‑1 (MQ=255) gtcgtTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGa < 2:2355409/148‑1 (MQ=255) gtcgtTGTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATAGTGATCCGTTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGa < 2:926800/148‑1 (MQ=255) tcgtTTTCGAGGCTCACGAGGACAATCTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGGCAAGGCTATCAATCACATCCTGaa < 1:236504/148‑1 (MQ=255) tcgtTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGaa > 2:1379701/1‑148 (MQ=255) tcgtTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGaa < 1:1115256/148‑1 (MQ=255) tcgtTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGaa > 2:1783003/1‑148 (MQ=255) cgtTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAat < 2:1287648/148‑1 (MQ=255) cgtTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAat < 1:2552365/148‑1 (MQ=255) tttCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATg > 2:3545687/1‑148 (MQ=255) ttCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATgg < 2:443178/148‑1 (MQ=255) ttCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATgg < 2:2434227/148‑1 (MQ=255) cGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTc > 1:2838880/1‑148 (MQ=255) gAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCa < 2:747852/148‑1 (MQ=255) gAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCa < 2:1019380/148‑1 (MQ=255) ggCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAac > 1:603469/1‑148 (MQ=255) ggCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAac > 2:1039429/1‑148 (MQ=255) tCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACAcc < 2:1913911/148‑1 (MQ=255) aCGAGGACAAACTGCGTACCTTCGATACGACAGAGATGCTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGa < 2:2717753/148‑1 (MQ=255) aCGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGa < 1:3205399/148‑1 (MQ=255) aGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCGATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATga > 1:2425153/1‑148 (MQ=255) ggACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATgag < 2:2678601/148‑1 (MQ=255) ggACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTCCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATgag < 2:908572/148‑1 (MQ=255) aCAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGAt < 2:1659513/148‑1 (MQ=255) cAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATa > 2:3048207/1‑148 (MQ=255) aaaCTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATac < 2:1221719/148‑1 (MQ=255) aaaCTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATac < 2:2530570/148‑1 (MQ=255) cTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATAcacc > 1:1546332/1‑148 (MQ=255) tGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATAcacca > 1:316394/1‑148 (MQ=255) tACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACggg > 2:641561/1‑148 (MQ=255) tACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACAGATGAGGTACACCACggg > 2:3346525/1‑148 (MQ=255) aCCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGga > 1:2733620/1‑148 (MQ=255) gaTACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGAc > 2:8805/1‑148 (MQ=255) gaTACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGAc > 2:2217882/1‑148 (MQ=255) tACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCa < 1:3415902/148‑1 (MQ=255) aCTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAg > 1:2018797/1‑148 (MQ=255) gctCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTc < 2:2323599/146‑1 (MQ=255) tCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGAt < 2:3030646/112‑1 (MQ=255) tCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGAt > 1:3030646/1‑112 (MQ=255) tCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCAt > 1:1776942/1‑148 (MQ=255) tCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCAt > 1:153605/1‑148 (MQ=255) ccGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATc > 1:1631011/1‑148 (MQ=255) ggTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGa < 2:3259937/148‑1 (MQ=255) ggTTTGAGTTTTTAACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGa < 1:669730/148‑1 (MQ=255) ggTTTGAGTTTTTAACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGa < 1:669517/148‑1 (MQ=255) tttttCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATtg < 2:560364/148‑1 (MQ=255) tCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCa < 2:2550996/148‑1 (MQ=255) aCGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAgg < 2:847628/148‑1 (MQ=255) aaaGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTa < 2:2262404/148‑1 (MQ=255) aaGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTAt < 2:1829780/148‑1 (MQ=255) | CAATCATTATCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCGATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTAT > CP009273/1558538‑1558828 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |