| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 169,940 | T→A | 9.9% | intergenic (+9/+149) | fhuB → / ← hemL | fused iron‑hydroxamate transporter subunits of ABC superfamily: membrane components/glutamate‑1‑semialdehyde aminotransferase (aminomutase) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 169,940 | 0 | T | A | 9.9% | 302.9 / 4.3 | 128 | intergenic (+9/+149) | fhuB/hemL | fused iron‑hydroxamate transporter subunits of ABC superfamily: membrane components/glutamate‑1‑semialdehyde aminotransferase (aminomutase) |
| Reads supporting (aligned to +/- strand): ref base T (43/67); new base A (14/2); total (59/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.02e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 135 total aligned reads displayed.
GGTGGGTGGTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTG > CP009273/169793‑170086 | ggtgggtgGTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCat < 2:2389704/148‑1 (MQ=255)ggtgggtgGTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCat < 2:2389893/148‑1 (MQ=255) gggtggTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCAtata < 1:861302/148‑1 (MQ=255) gggtggTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCAtata < 2:523160/148‑1 (MQ=255) gggtggTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCAtata < 2:2315884/148‑1 (MQ=255) ggtggtTTAGTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTTTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATaa < 2:569111/148‑1 (MQ=255) ggtggtTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATaa < 2:341900/148‑1 (MQ=255) ggtggtTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTACATATaa > 2:3404650/1‑148 (MQ=255) ttACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGccc < 1:187459/148‑1 (MQ=255) ggTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGcc < 2:3331388/148‑1 (MQ=255) gtgtTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTTAATTTTTCATATAACAGCCCGGTAAGcca > 1:133107/1‑147 (MQ=255) gtgtTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATCACGGCCCTGTACGCCt < 1:458726/148‑1 (MQ=255) gtgtTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCt < 1:889466/148‑1 (MQ=255) gtgtTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCAATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCt < 1:2726972/148‑1 (MQ=255) gtTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCAAATAACGGCCCTGTACGCCTgg > 2:300074/1‑148 (MQ=255) gtTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTACAAATAAAAGCCCAGTACCCCTgg > 2:300124/1‑148 (MQ=255) cGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTACAAATAAAGGCCCAGTACGCCAGGACg > 2:1096288/1‑148 (MQ=255) cTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTTCATATAAACGCCCAGTACGCCAGGGCGGa > 1:1591891/1‑148 (MQ=255) cTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTGAATTTTTACAGATAAACGCCCGGGAAGCCGGGGCggc > 1:1592130/1‑147 (MQ=255) gACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATa > 2:3234659/1‑148 (MQ=255) gACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAAAGGCCCTGTACGCCTGGACGGATa > 2:2575387/1‑148 (MQ=255) gACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAAATTTTACATATAACGGCCCTGTAAGCCTGGACGGATa > 2:1175169/1‑148 (MQ=255) aCTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTAGCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATaa < 1:490083/148‑1 (MQ=255) aCTGGTGTGGGCGGATGGGGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTGGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATaa < 1:2143748/148‑1 (MQ=255) cTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATaaa < 1:214336/148‑1 (MQ=255) cTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATaaa < 1:2016079/148‑1 (MQ=255) tgtgGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGt < 1:1166653/148‑1 (MQ=255) tgGGGGGATGGTGGTGTTCCATTTCCTGAGCCGGGGGGGGGTGGTGTCAACCTTTATCGGCGCGCCATATTTTAGATTTTTGTTGAGAAAGAAGTGCCGTTATTTTTTCCATATCACGGCCCTGTACGCCTGGACGGATAAAGCGttt < 1:1027785/148‑1 (MQ=255) gATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTTAAAATAAAGGCCCGGTAAGCCGGGCCGGCAAAAGCGTTTAAGCGa > 1:842016/1‑148 (MQ=255) aTGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTGTAATTTTACAGATAAAAGCCCACTAAGCCCGGACGGATAAACCCTTTaatccac > 1:3154185/1‑142 (MQ=255) gCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCACCCTTTATCGGCGCGCAATATTTTATCTATTTGTTGAGAAAGCAGAGCCTTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACgg < 1:3176944/148‑1 (MQ=255) gTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTACATATAACGGCCCGGTAAGCCGGGACGGATAAAGCGTTTAAGCGACAAAGGCTg > 1:2305398/1‑148 (MQ=255) ccattccaGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCg < 1:564814/148‑1 (MQ=255) ccattccaGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCg < 1:564913/148‑1 (MQ=255) ccattccaGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCAATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCg < 1:1917932/148‑1 (MQ=255) cattccaGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGa < 2:2425913/148‑1 (MQ=255) tccaGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGc < 2:289510/148‑1 (MQ=255) ccaGATCCCGGCGGGGCTGCTTTCAACCTTTATCGGCGCGCAATATTTTATCTATTTGTTGAGAAAGCAGAGCCTTTAATTTTACCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCg < 1:911083/148‑1 (MQ=255) caGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGa < 1:501708/148‑1 (MQ=255) gATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACg < 2:3093404/148‑1 (MQ=255) aTCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGc < 1:3337857/148‑1 (MQ=255) aTCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGc < 1:3338152/148‑1 (MQ=255) aTCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGc < 2:542136/148‑1 (MQ=255) aTCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTGTATTTTTTGATATAAAGGCCCAGTACGCCGGGGCGGATAAAGCGTTTTAGCGACAACCGATGCCCCATGCGACGc > 1:1064747/1‑148 (MQ=255) ccGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTGAATTTTTAACAATAAAGGCCCTGTACGCCTGGACGGCTAAATCCTTTACGCGACCACGGATGCCCCCTGCGACGCggg > 2:1296871/1‑148 (MQ=255) ggcggGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTACATATAAAGCCCCAGTACGCCAGGACGGATAAAGCGTTTACGCGACAAAGGATGCCCCATGCGACGCTGgcg > 2:406143/1‑148 (MQ=255) gcggGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTGTATTTTTTCAAATAAAGGCCCAGTACGCCAGGTCGGTGAAATCGGTTAAGCGACAACCGATTCCCGATGCGACGCTGgcgc > 1:1455728/1‑148 (MQ=255) ggCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTTATTTTTTCATATAACGGCCCGGGACGCCAGGACCGCTAAAGCGTTTAGGGGACAACGGATTCCCGATGCGACGCGGGCGCGTcg > 2:1540984/1‑147 (MQ=255) ggCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAAATTTTTCAAATAAAGGGCCAGTAAGCCAGGACGGATAAAGCGTTTAATCGACAAAGGATTACCCATGCGACGCTGGCGCGTCt > 2:1540980/1‑148 (MQ=255) ctgctgTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTGAAATTTTTAAAATAAACGCCCAGTACGCCCGGGCGGCAAAAGCGGTTACGAGACAAACGATGCCCCAAGCGACGCAGGcgcggcgta > 1:2521589/1‑143 (MQ=255) ctgctgTCAACCTTTATCGGCGCGCAATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTa < 1:1444688/148‑1 (MQ=255) tCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAAAGGCCCTGTAAGCCTGGACGGATAAAGCGTTTAAGCGACAACGGATGCCCGATTCGACGCTGGCGCGTCTTATCGGGc > 2:869365/1‑148 (MQ=255) cAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGcc < 1:530983/148‑1 (MQ=255) cAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGcc < 1:530717/148‑1 (MQ=255) tttATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACaa < 2:2489453/148‑1 (MQ=255) tttATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATAGAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACaa < 2:2489948/148‑1 (MQ=255) tATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAAc < 2:2313511/148‑1 (MQ=255) tATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAAATTTTACAAAAAAACGCCCAGTAAGCCGGGACGGATAAAACGTTTAAGCGACAAAGGAATCCCCAAGCGTCCCAGGCGCGTCGTATACGGCCTACAAAc > 1:2935474/1‑148 (MQ=255) tATCGGCGCGACATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAAc < 2:2817547/148‑1 (MQ=255) ggCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCTTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAATGCGTTTACGCGACAACGGTTGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGcc < 2:358946/148‑1 (MQ=255) cgcCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTGCATATAACGGCCCTGTAAGCCTGGTCGGATAAATCGTTTAAGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATAGGGCCTACAAAAGGccccca > 2:2882613/1‑146 (MQ=255) cgcAATATTTTATCTTTTTGTTGATAAAGCAGAGCGGTTATTTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGa < 1:2490956/148‑1 (MQ=39) gcCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATAAAAACGCCCAGTAAGCCAGGACGGATAAAGCCTTTACGCGACAAACGATGCCCGATGCGAACCTGGCGCGTCTTAAAGGGCCAAAAAAAGGcccccca > 2:490059/1‑145 (MQ=255) ccATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTACATATAAAGGCCCTGTAAGCCTGGACGGATAAAGCGTTTAAGCGACAACCGATGCCCCATGCGACGCTGGCGCGTGTTATAGGGCCTACAAAACGCCCCgcaa > 2:2034674/1‑145 (MQ=255) ccATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATATTTACAAATAAAGGCCCAGTAACCCAGGACGGATAAAACGTTTACACCCCAACCGATTCCCGATGCCACCCTGGCGCGTCTTATAGGGCCAAAAAAAAGCCCCCAAt > 1:2370048/1‑148 (MQ=255) ccATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAAATTTTAAATATAAAACCCCAGTAACCCACGACCGAAAAAAACTTTAACCCACAACCGAATCCCCCTGCCACGCAGGCGCGGCGTATAGGGCCGACAAAAAGccccccaa > 1:2273337/1‑144 (MQ=255) caattttttATCTATTTGTTGATAAAGCAGAGCCTTTATTTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGGTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAAt < 1:3404650/143‑1 (MQ=255) atTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAAAGGCCCTGTAAGCCTGGACGGATAAAGCGTTTACGCGACAACGGATTCCCGATGCGACGCTGGCGCGTCTTATCGGGCCGACAAAACGCCCCGAATAGTa > 2:3202757/1‑148 (MQ=255) atTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATAAAACGGCCCAGTACCCCTGGACGGGTAAAGCGTTTACCCGACAACCGAAGCCCCAGGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTa > 2:3202876/1‑148 (MQ=255) atTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTACATATAACCGCCCAGTACGCCAGGACGGATAAAGCGTTTAAGCGACAACGGATTCCCGATGCGACGCTGGCGCGTCTTATCGGGCCGACAAACCGCCCCGCAACGTa > 2:3205279/1‑148 (MQ=255) ttttATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGAGGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAg < 1:2882708/148‑1 (MQ=255) ttATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTACATATAAAGGCCCTGTACGCCTGGACGGATAAAGCGTTTAAGCGACAACCGATGCCCGATTCGACGCTGGCGCGTCTTATAGGGCCTACAAACGGCCCCGAATCGTAGGt > 2:2367902/1‑148 (MQ=255) tATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTACATATAACGGCCCTGTACGCCTGGCCGGAAAAATCGTTTAAGCGACAACGGAAGCCCGATGCGACGCTGGCGCGTCTTATAGGGCCTACAAACGGCCCCGAAACGTAGGTc > 2:2040895/1‑148 (MQ=255) tCTATTTGTTGAGAAAGCAGAGCCTTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCgg < 2:40594/148‑1 (MQ=255) tCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCgg < 2:3492912/148‑1 (MQ=255) tCTATGTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCgg < 2:3493018/148‑1 (MQ=255) cTATTTGTTGACAAAGCAGAGCCTTTATTTTTTCCATATAACGGCCCTGTACGCCTGGACGTATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGa < 1:1635700/148‑1 (MQ=255) tgttgAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTGTACGCGACAACGGAGGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAgg < 2:3425389/148‑1 (MQ=255) gttgAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGc < 2:1594043/148‑1 (MQ=255) gttgAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGc < 2:1594180/148‑1 (MQ=255) ttgAGAAAGCAGAGCCGTTAATTTTTCCATATAAAGGCCCTGTAAGCCTGGACGGATAAAGCGTTTAAGCGACAACCGATGCCCCAGGCGACGCTGGCGCGTCTTATCGGGCCTAAAAACGGCCCCCAAAAGGATGTCGGTTAAGGCg > 2:2827184/1‑148 (MQ=255) ttgAGAAAGCAGAGCCGTTAATTTTTACATATAACCGCCCGGTACGCCGGGACGGATAAAACCTTTAAGCGCCAACGGATGCCCCATGCGACGCGGGCGCGTCGTATCGGGGCTACAAACCGCCCCGCATCGTAGGTCGGATAAGGCg > 2:2827213/1‑148 (MQ=255) ttgAGAAACCAGAGCCTTAAATTTTGCAATATACCGGCCCTGAACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCg < 1:634292/148‑1 (MQ=39) aaGCAGAGCCGTTAATTTTACCATATACCGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCAcg < 1:3137580/148‑1 (MQ=255) aGCAGAGCCGTTAATTTTTACATATAAAGGCCCTGTACGCCTGGACGGGTAAAGCGTTTAAGCGACAAAGGATGCCCGATGCGACGCTGGCGCGTGTTATCGGGCCTACAAACGGCCCCGAATCGTTGGTCGGTGAAGGCGTTCAcgc > 2:2960396/1‑148 (MQ=255) gCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATc < 2:895004/148‑1 (MQ=255) ccGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATcc > 1:133384/1‑148 (MQ=255) tAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACa > 2:1463280/1‑148 (MQ=255) aaTTTTTCCATACACCGGCCCTGTACGCCTGGAGGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACaa < 1:28115/148‑1 (MQ=255) aaTTTTTCCATAAAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACaa < 1:2882613/148‑1 (MQ=255) ttttttCAAAATACCGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGAGGCCCGATGCGACGCTGGCGCGTATTATCGGGCCAACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACaaa < 1:1540980/147‑1 (MQ=38) aTTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGGGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACaaa < 2:2504998/148‑1 (MQ=255) aTTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACaaa < 2:1848836/148‑1 (MQ=255) tttttCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAAc > 2:2738030/1‑148 (MQ=255) tttttCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAAc > 1:2793522/1‑148 (MQ=255) ttttCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAAcc > 2:1353843/1‑148 (MQ=255) ttttCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAAcc > 2:1353213/1‑148 (MQ=255) cATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCt > 1:1818329/1‑148 (MQ=255) cATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCt > 1:13360/1‑148 (MQ=255) atatAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTg > 2:2277658/1‑148 (MQ=255) | GGTGGGTGGTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTG > CP009273/169793‑170086 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |