| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,004,533 | G→T | 100% | T151T (ACG→ACT) | yedL → | putative acyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,004,533 | 0 | G | T | 96.3% | 471.6 / 7.0 | 190 | T151T (ACG→ACT) | yedL | putative acyl transferase |
| Reads supporting (aligned to +/- strand): ref base G (7/1); new base T (78/98); total (91/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.54e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 193 total aligned reads displayed.
GATGCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACGCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAGTG > CP009273/2004388‑2004677 | aTGCCTTCATCGCCTGAGCTTAGAAACTGGTACACAGGCTGTATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTa < 2:851991/148‑1 (MQ=255) aTGCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTTACTCTa > 2:2271967/1‑148 (MQ=255) tGCCTTCATCGCCTTAGCTTAGAAACGGGTACACAGGCTGGTTTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTAt < 2:2777350/148‑1 (MQ=255) gCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTAATTTACTCTATg > 1:1370951/1‑148 (MQ=255) gCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGTCTCTATg > 2:1749746/1‑148 (MQ=255) gCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATg > 2:2629800/1‑148 (MQ=255) ccTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTTACTCTATGc > 2:2166032/1‑148 (MQ=255) ttCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCAATGACTCTATGCGa > 2:1660798/1‑148 (MQ=255) cATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGaaa < 2:334319/148‑1 (MQ=255) tCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAaat < 2:254194/148‑1 (MQ=255) tCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAaat < 1:2689197/148‑1 (MQ=255) gCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTTTGCGCaaaaaa > 2:2993105/1‑148 (MQ=255) ccTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAaataat < 1:3075009/148‑1 (MQ=255) ccTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACACTATGCGAAaataat > 2:292814/1‑148 (MQ=255) gAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGa‑a < 2:289795/148‑1 (MQ=255) cTTAGAAACGGGTACACAGGCTGGATGTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCTCTGATTGCGAAACGTTTGCTGATTTTCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTg < 1:2038666/148‑1 (MQ=255) ttAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTAATTTACTCTATTCGAAAAAAATGA‑Atttc > 1:3128521/1‑146 (MQ=255) ttAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGc < 1:1450309/148‑1 (MQ=255) gAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCAt < 1:3300466/148‑1 (MQ=255) gAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCAt < 2:2648317/148‑1 (MQ=255) cGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGc < 1:2178709/148‑1 (MQ=255) cGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTGATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGc < 2:3002897/148‑1 (MQ=255) tACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGa < 2:2223937/148‑1 (MQ=255) tACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGa < 2:2027938/148‑1 (MQ=255) acaGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACgc < 2:2912012/148‑1 (MQ=255) ggCTGGATTTACGGCCTGCTATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTTTATCTATTCGAAAATAATTA‑ATTTCCATGATCCACACgcagc > 1:508880/1‑148 (MQ=255) gCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTTACTCTATTCGAAAATAAAGA‑ATTTCCATGAGCCAGACgcagca > 1:2061669/1‑148 (MQ=255) gCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTGTATCTATTCGAAAATAATTA‑ATTGCCATGAGCCAGACgcagca > 2:1396323/1‑148 (MQ=255) gCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTGACTCAATGAGAAAATAAAGACATTGCC‑TGAGCCAGACgcccca > 1:881220/1‑144 (MQ=255) tGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGcaca < 2:3298670/148‑1 (MQ=255) tttACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATTA‑ATTGGCAAGAGCCAGACGCAGcacaatat > 2:1259514/1‑144 (MQ=255) aCGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGc < 1:184736/148‑1 (MQ=255) cGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTTTCTCTATGAGAAAATAATGA‑ATTTCCATGAGCCAGAAGCAGCACAATCTTGCa > 2:977265/1‑148 (MQ=255) ggCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCAt < 1:1322858/148‑1 (MQ=255) gCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCAtt < 1:912553/148‑1 (MQ=255) cTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCg < 1:2393274/148‑1 (MQ=255) ccATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACg < 2:986474/148‑1 (MQ=255) aTCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGtg < 2:2744469/148‑1 (MQ=255) aCTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGAGTTTTTTAATTGACACTATTCGAAAAAAAATA‑ATTTGCAATTGCCACACCCAGCACAATCATTCATTAGACGtggtgc > 1:2257866/1‑148 (MQ=255) ttATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTAATTTAATAAATTCGAAAATAAAGA‑ATTTCCATGAGCCCGAAGCAGCACATTCTTGCATTAGACGTGCTGCGcc > 2:928380/1‑148 (MQ=255) ttATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGcc < 1:780185/148‑1 (MQ=255) ttATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGcc < 1:2357221/148‑1 (MQ=255) ttATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTGACTATATTCGAAAATAATGA‑ATTTGCATTATCCAGACGCAGCACAATATTTGATTAGAACTGGTGCGcc > 1:3473420/1‑148 (MQ=255) tATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCt < 2:1956466/148‑1 (MQ=255) tttGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCttt < 1:1689533/148‑1 (MQ=255) ttGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTCATTTAATCTATTCGAAAATAATGA‑ATTTCCATGTGCCAGACGCAGCACAATCTTGCATTCGACGTGGGGCGCCttta > 1:3243823/1‑148 (MQ=255) ttGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACGCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACAATCTTTCAATCGACGTGCTGCGCCttta > 2:797442/1‑148 (MQ=255) tGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCtttat < 1:3446362/148‑1 (MQ=255) aaGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCtttattt < 1:3559469/148‑1 (MQ=255) aaGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCtttattt < 2:2156822/148‑1 (MQ=255) gCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTttatttat < 1:791817/148‑1 (MQ=255) cATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATTA‑AATTGCATGAGCCAGACGCAGCACATTATTGCATTCGACGTGCTGCGCCTTTATTTATc > 2:2549099/1‑148 (MQ=255) aTGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCa < 2:749807/148‑1 (MQ=255) tGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTTACTCTATGCGAAAAAAATGA‑ATTGCCAAGAGCCCGACGCAGCACAATCTTGCAGTAGACGTGCTGCGCCGTTATTTATGAc > 2:471607/1‑148 (MQ=255) tGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCAc < 1:1999932/148‑1 (MQ=255) tGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCGTTATTTATCAc > 2:1962742/1‑148 (MQ=255) tGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGAGTTTTATAATTTACTCTATTCGAAAATAATTA‑ATTTCCCTGAGCCAGACGCACCACAATCATTCATTCGACGGGCTGCGCCGTTTTTTATCAc > 1:3522743/1‑148 (MQ=255) ggTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTGATTTAGAATATTCGAAAAAAAAGA‑ATTTGCATGAGCCCCACGCAGCCCAATAATGGATTGGAGCTGGTGGGCCCttttttataaac > 1:3394910/1‑144 (MQ=255) gTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTTACGCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGAAGCAGCAAATTCTTGCATTCGACGTGCTGCGCCTttatttatgaaaa > 2:3047242/1‑143 (MQ=255) ttCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTTTCTCTAATCGAAAAAAAAGA‑ATTGCCAAGAGCCAGAAGCAGCACATTCTTGCATTAGACGTGCTGCGCCCTTATTTATCACcagc > 2:1872169/1‑148 (MQ=255) ttCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACcagc < 2:1635788/148‑1 (MQ=255) ttCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACAATCTTGCATTCGACGTGCTGCGCCGTTATTTATAACcagc > 2:153527/1‑148 (MQ=255) aTTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCGTGCCTTCGGCGTGCTGCGCCTTTATTTTTCACCAGCAGGAAAc > 2:2011959/1‑148 (MQ=255) aaCCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATTCGAAAATAATGA‑ATTTCCATGAGCCAGACGCAGCACAATCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCACCAGGAAAACCCTTg > 2:2867509/1‑148 (MQ=255) aaCCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTAAGCGAAAATAATGA‑ATTGCCAAGAGCCAGACGCAGCACATTCTTGCAATCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTg > 2:1708794/1‑148 (MQ=255) aaCCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTGACACTATGCGCAAATAATGA‑ATTTCCATGAGCCACACGCAGCACATTCTTGCATTCGACCTGCAGCGCCTTTATTTATCACCACCAGGAAACCCCGTg > 2:235060/1‑148 (MQ=255) aaCCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAAATTACGCTATTCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCATGCAATCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACAccatt > 2:3217488/1‑145 (MQ=255) aaCAGTTTGCTGATTATCGACTTGATCCACACAGTAGATTTTTATCATTGAATCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACTTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTg < 1:3108725/148‑1 (MQ=255) ccGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTc < 2:3243823/148‑1 (MQ=255) cGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTcc < 1:860475/148‑1 (MQ=255) tttGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAAATGAATCTATGCGAAAATAATGA‑AATTCCCTGAGCCCGACGCAGCACATTATTGCATTCGACCTGCTGCGCCGTTATTTATCACCAGCAGGAAACCCCTTTTccca > 2:1627066/1‑146 (MQ=255) tGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAg < 1:16369/148‑1 (MQ=255) tGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAg < 1:714765/148‑1 (MQ=255) gCTGATTATCGACTTGATCCACACAGTCGTTTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGa < 1:3492403/148‑1 (MQ=255) aTTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGcc < 1:2762896/148‑1 (MQ=255) ttATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCTAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACTTTCTTGCTTTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGccc < 2:40572/148‑1 (MQ=255) tATCGACTTGATCCACACAGTCGATTTTTATCATTTACGCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACAATCTTGGATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAAAGCCTTGTCCATAGAACcccc > 2:521291/1‑148 (MQ=255) tATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGcccc < 1:2993105/148‑1 (MQ=255) aTCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCt < 1:3272561/148‑1 (MQ=255) tCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCtt < 1:1149388/148‑1 (MQ=255) ttGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTTCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCAACAGCAGGAAAAGCCTTGTCCAAAGTCGCCCCTTCcaca > 2:2682638/1‑148 (MQ=255) ttGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCcaca < 1:454285/148‑1 (MQ=255) tCCACACAGTCGATTTTTTTAATTGACTCTATTCGAAAATAATGA‑ATTTCCATGAGCCAGACGCCGCACATTCTTTCATTCGAAGTGGTGCGCCTTTATTTATAACCAGCAGGAAACGCCTTGTCCATAGACGCCCCATCCACAAgcg > 2:568595/1‑148 (MQ=255) tCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATgcg < 2:3052574/148‑1 (MQ=255) acacaGTCGATTTTTATCAATTACAAAAAGCGAAAAAAATTA‑AATTCCAAGAGCCAGACGCAGCACAATAATTCAATAGAAGTTCTTCGCCTTTATTTATAAACAGCAGGAAACCCCTTGTCCAAAAAAGCCCCATCCACAATCGCca > 2:1168755/1‑148 (MQ=255) cacaGTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCAAGAGCCAGACCCAGCACAATCTTGCATTCGACGTGCTGCGCCGTTATTTATAACCACCACGAAACCCCATGTCCAAAGACCCCCCGACCACAAGCGCcac > 2:2510327/1‑148 (MQ=255) gTCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTTCCATGAGCCAGACGCAGCCCATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGa > 1:1189865/1‑148 (MQ=255) tCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGaa < 1:1574577/148‑1 (MQ=255) tCGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGaa < 1:1295006/148‑1 (MQ=255) cGATTTTTATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGaaa > 1:2627579/1‑148 (MQ=255) tttttATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACct > 2:157292/1‑148 (MQ=255) tttATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACctct < 2:639344/148‑1 (MQ=255) tATCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTAt < 2:115155/148‑1 (MQ=255) tATCATTGACTCTATGCGAAAATAATGA‑AATGACATGAGCCAGACGCAGCACATTCTTGCATACTACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGACTTGTCAATATACGCACCTTCCACATGAGCCACAAGAAACCTCTAt > 1:3159979/1‑148 (MQ=255) aTCATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTAtt > 2:2944967/1‑148 (MQ=255) cATTGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTcc > 1:600376/1‑148 (MQ=255) ttGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAg < 2:3491350/148‑1 (MQ=255) ttGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAg < 2:3173767/148‑1 (MQ=255) ttGACGCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAg > 1:867449/1‑148 (MQ=255) tGACTCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAGt > 2:86053/1‑148 (MQ=255) | GATGCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACGCTATGCGAAAATAATGA‑ATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAGTG > CP009273/2004388‑2004677 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |