| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,713 | C→A | 30.7% | intergenic (‑30/+278) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,713 | 0 | C | A | 30.7% | 260.1 / 31.8 | 183 | intergenic (‑30/+278) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base C (37/77); new base A (35/23); total (83/100) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.85e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 185 total aligned reads displayed.
GCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGC > CP009273/2170568‑2170860 | gCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCaa < 1:2783849/148‑1 (MQ=255)gCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTTGATTTaaa > 2:307997/1‑148 (MQ=255) cAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCaaa < 2:1871766/148‑1 (MQ=255) gCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAat < 2:1427233/148‑1 (MQ=255) gCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAat < 2:389478/148‑1 (MQ=255) cGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAata < 2:3300130/148‑1 (MQ=255) cGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTCAAAata > 2:1481262/1‑148 (MQ=255) gTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATTACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAAtata < 2:1207559/148‑1 (MQ=255) tttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATaa < 1:3542155/148‑1 (MQ=255) tttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTAAAAAAATaa > 1:2910691/1‑148 (MQ=255) ttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTCAAAATATAAt > 2:3495195/1‑148 (MQ=255) tACCACCACTTTCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaa < 2:3525025/148‑1 (MQ=255) tACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaa < 1:1784059/148‑1 (MQ=255) tACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaa < 2:2573394/148‑1 (MQ=255) accaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaaa < 2:631741/148‑1 (MQ=255) accaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaaa < 1:1236820/148‑1 (MQ=255) ccaccaCTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAAAATAATGAAat > 2:2356483/1‑148 (MQ=255) ccaccaCTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAATGAAat > 2:1726339/1‑148 (MQ=255) caccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAatt < 1:2894131/148‑1 (MQ=255) caccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTGGTATTAAAAAaataatttaaat > 1:2249124/1‑142 (MQ=255) ccacTTGCATCGGTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGAATTCAAAATATAATGTAaatat > 1:2924628/1‑148 (MQ=255) cacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattatt < 2:2427779/148‑1 (MQ=255) acTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAtt‑t < 1:2685893/148‑1 (MQ=255) acTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTCAAAAAATAAATAAATTAtt‑t > 1:556378/1‑148 (MQ=255) gCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTCAAAAAATAATTAAAATATt‑ttttt > 2:743128/1‑148 (MQ=255) aTCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGttttt < 1:2369088/148‑1 (MQ=255) aTCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGttttt < 2:1196187/148‑1 (MQ=255) aTCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAAAATAAAGAAATTATt‑ttttttt > 2:3461005/1‑148 (MQ=255) tCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTTGATTTAAAAATATAAATAAAATATt‑tttttttt > 2:35037/1‑147 (MQ=255) cGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAAATAAATTAAT‑TTTTTTTaa > 2:3303013/1‑148 (MQ=255) cGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTAGATTTAAAAAAAAAAATAAAAAATt‑tttttttta > 2:1520525/1‑146 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGTTTTTaaa < 1:2070398/148‑1 (MQ=255) ttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGTTTTTAAata < 2:1013671/148‑1 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCgag < 2:260927/148‑1 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTCGATTTCAAAATATAAAGAAAATATT‑TTTTTTTAAATATAgat > 2:2328414/1‑147 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTCAAAATATAATGAAATTATT‑TTTTTTTAAATATagag > 2:536489/1‑148 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCACATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCATGTCGTTTTTTTTATATTTAAAAAAAAAAACAAAATATTATTTTTTTaaaaaaaag > 1:2015292/1‑142 (MQ=255) ttGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGAGAt < 2:983745/148‑1 (MQ=255) ttGTGAAGATTGACTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGAGAt < 2:2137549/148‑1 (MQ=255) tgtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGAGATa < 1:175536/148‑1 (MQ=255) gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATATAATGAAATTATT‑TGTTTTTAAATATAGAGATaaag > 2:3398176/1‑146 (MQ=255) tatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGAGATAACGATc < 1:3077360/148‑1 (MQ=255) tatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGAGATAACGATc < 1:3077711/148‑1 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGAGATAACGATca < 1:2306281/148‑1 (MQ=255) tGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGGTTTAAAAATATAATGAAATAATT‑TTTTTTTAAATATAGAGATAACGCTcaca > 2:1250023/1‑148 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGAGATAACGATCACaaaa < 1:2440238/148‑1 (MQ=255) tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTATTTTTTAAAATATAAATAAAATATT‑TTTTTTTTAATATATAGATAAAAATAACaaaaa > 1:425360/1‑148 (MQ=255) gAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTTAAAATATAATTTAAATATT‑TTTTTTTTATTATCGAGTTAGCGTTTAAAAAAACCAct > 1:790478/1‑147 (MQ=255) cATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTTGATTTAAAAATATAAATTAAATATT‑TTTTTTTTTATATAGAGTTAAAGATCAAAAAAAAGaaaaaaata > 1:1642836/1‑143 (MQ=255) aTAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGATTTGAAAAAATAATGTAAATATT‑TTTTTTTTAATATAGCGATAAAGATCACAAAAACCACAatattac > 1:1098991/1‑145 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATTAAATTATT‑TGTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGaaaa < 2:1444437/148‑1 (MQ=255) ccccgcGCGGGGCGTTGTACACCATCTGCTTTGACGACACCACGTACATTTTCAAAGCCGTTCGTTTGTTTTCGATTTCAAAATAAAATGAATTTATT‑TTTTTTTAAATATCGACAAAACGATCACAAACACGACAATATGAAAatta < 2:2710994/146‑1 (MQ=255) gcgcTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGGGTTTTGGATTTTAAAATAAAATTAAATTATT‑TTTTTTTTTATATATATATAAAGATAACAAAAAACAAAATATAaaaaaaattag > 1:1592120/1‑141 (MQ=255) cgcTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCga < 2:2222026/148‑1 (MQ=255) cgcTGTGCGTTGTTCAGCATCTGCTTTGTCGAAACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCga < 2:3343521/148‑1 (MQ=255) cgcTGTGCGTTGTTCAGCATCGGCTTTGTCGATACCCCTTAAATTTGCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGAGATAACGATCAAAAAAACGACAATATGAAAATTATTCga < 1:576858/148‑1 (MQ=255) gcTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTTTT‑TGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCgag < 2:3493348/148‑1 (MQ=255) cTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTTGATTTAAAAATATAAATTAATTTTT‑TTTTTTTAAATATACTGATAAGGATCACAAAAAATACAATATTAAAaatattttagg > 1:2443427/1‑143 (MQ=255) cTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATTAAATTATT‑TGTTTTTAAATATCGAGATAACGATCACAAACACGACAATATGAAAATTATTCgagg < 2:3186300/148‑1 (MQ=255) gtgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCgaggag < 2:1629142/148‑1 (MQ=255) cGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAAAATAATTAAATTATT‑TTTTTTTTAAAAAAGATATAAACATAAAAAAAAACACAAAAATAAAAATATTAGAGGAGTGa > 2:1623090/1‑148 (MQ=255) tgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTAAAAAAATAAATAAAATATT‑TTTTTTTAAATATAGAGATAAACATAACAAAAAAGACAATAAGAAAATTATTAGAGGAGTGAAAg > 2:412810/1‑148 (MQ=255) gaaTCTGATTTGTCGATACCACGTACATTTTAATATCCTGTGTTTTTTTTTCTTTTTCAAAATATAATTAAATTTTT‑TTTTTTTAAATATCGAGATAACGAACACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑aaaa < 1:1765019/146‑1 (MQ=255) gCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTCAAAATATAATTAAATTATT‑TTTTTTTAAATATAGAGATAAAGATAAAAAAAAAAAAAAAATTAAAAATATTAGAGGAGTGAAAGGC‑aaaa > 2:2753846/1‑148 (MQ=255) gCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGGATTTGAAAATATAATGAAAATAAT‑TTTTTTTAAATATCGAGTTAAACATCACAAAAAAGTAAAAATTAAAATTATTAGAGGAGGGTAAGGC‑aaat > 2:2753849/1‑147 (MQ=255) gCATCGGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑aaaa < 2:2266720/148‑1 (MQ=255) cATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTTGATTTGAAAAAATAATTAAAATATT‑TTTTTTTTTATATAGAGATAAACATCACAAAAAACACAAAATTAAAAATATTAGAGGCGGGGAAGGG‑caaaa > 2:2464345/1‑148 (MQ=255) cATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTCAAAATATAATGAAAATATT‑TTTTTTTAAAAATAGAGATAAACATCACAAAAAACAAAAAATGTAAATTATTAGAGGAGTGGAAGGC‑caaaa > 2:1140998/1‑148 (MQ=255) aTCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTGGTTTTTTTTCGATTTCAAAATATAATGAAATTATT‑TTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑aaaaaa < 2:1020816/148‑1 (MQ=255) cTGCTTTGTCGATACCACTAAAATTTTCATATCCTGTCTTTTGTTTTCTATTTAAAAATATAATGAATTTATT‑TTTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAAc < 1:1461521/148‑1 (MQ=255) cTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTTATTTAAAAAAAAAAATAAAATAAT‑TTTTTTTATAAATAGAGATTACCATCACAAAAAACAAAAAATATAAAATATTAGCGGAGGGGAAGTC‑CAAAAAActtc > 2:3289721/1‑145 (MQ=255) ttGTCGATACCACGTAAATTTTCATATCCTGTCTTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCt < 2:1917814/148‑1 (MQ=255) tGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCTATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTc < 2:2932144/148‑1 (MQ=255) tCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATTAAATTATT‑TTTTTTTTAATATCGAGATAACGATCACAAAAAAGACCATATTAAAATTATTAGAGGAGTGAAAGGC‑AAAAAAAAGGCCTccc > 2:789243/1‑148 (MQ=255) tCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATTAAATTATT‑TTTTTTTTAATATAGAGATAAAGATCACAAAAAAGACAATATTAAAATTATTAGAGGAGTGTAAGGC‑AAAAAAAAGGCCAccc > 2:2631487/1‑148 (MQ=255) cGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGGATTTGAAAATATAATGAAAATATT‑TTTTTTTAAATATAGTGAAAAAGATCACAAAAAACAAAAAATTAAAATTATTGGTGGGGGGTAAGGC‑CAAAAAAAGGcccaccc > 2:1627974/1‑143 (MQ=255) gATACCACTAAATTTTTAATATCCTGTGTTTTTTTTTCTATTACAAAATATAATCAATTTTTT‑TTTTTTTAAATATCGAGATAACTATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGa < 1:2525427/148‑1 (MQ=255) aTACCACGTACATTTTCATATCCTGTCTTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCTAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGAt < 2:52548/148‑1 (MQ=255) tACCACGTACATTTTCATATCCTGTCGTGTGGTTTGGATTTAAAAATATAATGTAATTTTT‑TTTTTTTTAATATAGAGATAACGATCACAAAAACGACAAAATTAAAAATATTGGAGGTGTGGAAGGG‑AAAAAAAAGGCCTcccccga > 2:3058398/1‑144 (MQ=255) aggtaatttttCTTATCGTGTCTTTTTTTTTCTATTTCAAATTATATTGAAATTATT‑TTTTTTTAAATATCGAGATAACTAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGa < 2:371651/141‑1 (MQ=255) taatttttCATATCCTTTCTTTTTTTTTCTATTTAAAAATATAATTAAATTATT‑TTTTTTTAAATATCGAGATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGc < 1:875025/144‑1 (MQ=255) aaaTTTTCATATCCTGTCTTTTTTTTTCTATTTAAAAATATAATTAAATTTTT‑TGTTTTTAAATATCGAGATAACGAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGcc < 1:582719/146‑1 (MQ=255) ctttttCATATCGTGTGTTTTTTTTTATTTTAAAAAATATAATTAATTTTTT‑TTTTTTTAATTATCGACATAACGAAAACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCg < 1:3461005/146‑1 (MQ=255) ttttaCATTTCCTGTATTTTTTTTTCTATTTAAAAATATATTTAATTTATT‑TTTTTTTAAATTTCGATATAACGAAAAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGt < 1:3398176/147‑1 (MQ=255) cATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaa < 2:589880/148‑1 (MQ=255) cATATCCTGTCGTGTTTTTTGGATTTCAAAATATAAAGAAATTATT‑TTTTTTTAAATATCGAGATAAACATAACAAAAAACAAAAAATGAAAATTATTAGAGGGGTGTAAGGC‑AAAAAAAACGCCTCCCCATAGGGAAGCCCTAgaca > 2:1088518/1‑145 (MQ=255) gTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGcgcg > 2:242326/1‑148 (MQ=255) cGTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtg > 2:186809/1‑148 (MQ=255) gtttttttTCTATTTAAAAATATAATGAAATTATT‑TTTTTTTAAATATCGATATAACTATAACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtg < 1:2328414/148‑1 (MQ=255) gtttgtttTCGATTACAAAATATAATGAAATTATT‑TTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtgt < 2:219084/148‑1 (MQ=255) tttgtttTCGATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt > 1:2762890/1‑148 (MQ=255) tttgtttTCGATTTAAAAATATATTTAAATTATT‑TGTTTTTAAATTTCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt < 2:1285810/148‑1 (MQ=255) tgtttTCTATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt < 2:1906253/148‑1 (MQ=255) ttCGATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATg > 1:3136376/1‑148 (MQ=255) aTTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 1:798161/1‑148 (MQ=255) tttCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa > 1:2388753/1‑148 (MQ=255) tttCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa > 1:2840264/1‑148 (MQ=255) tttCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa > 1:1060851/1‑148 (MQ=255) ttCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt > 2:3365800/1‑148 (MQ=255) cAAAATATAATAAATTTTTT‑TTTTTTTAAATATCGATAAACCTAACACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGc < 1:743128/148‑1 (MQ=255) | GCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT‑TGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGC > CP009273/2170568‑2170860 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |