| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,749 | G→T | 11.2% | intergenic (‑66/+242) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,749 | 0 | G | T | 11.2% | 384.7 / 3.5 | 181 | intergenic (‑66/+242) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base G (88/59); new base T (8/20); total (96/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.28e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 187 total aligned reads displayed.
GATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGA > CP009273/2170602‑2170896 | gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCgag < 2:260927/148‑1 (MQ=255)gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCgag < 2:260619/148‑1 (MQ=255)gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATagag > 2:536489/1‑148 (MQ=255) ttGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGAt < 2:983745/148‑1 (MQ=255) ttGTGAAGATTGACTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGAt < 2:2137549/148‑1 (MQ=255) gtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATaa < 2:3476105/148‑1 (MQ=255) gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATATAATGAAATTATTTGTTTTTAAATATAGAGATaaag > 2:3398176/1‑146 (MQ=255) aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGa < 2:665675/148‑1 (MQ=255) tatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATc < 1:3077711/148‑1 (MQ=255) tatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTCAAAATATAAATAAAATATTTTTTTTTAAATATAGAGATAAAGATc > 2:3453451/1‑148 (MQ=255) tGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGGTTTAAAAATATAATGAAATAATTTTTTTTTAAATATAGAGATAACGCTcaca > 2:1250023/1‑148 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACaaaa < 1:2440238/148‑1 (MQ=255) tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTATTTTTTAAAATATAAATAAAATATTTTTTTTTTAATATATAGATAAAAATAACaaaaa > 1:425360/1‑148 (MQ=255) gCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTAAAAAAATAATGTAAATATTTTTTTTTTAATATAGATATAAAGATCACAAAAAc > 2:1113579/1‑148 (MQ=255) gAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTTAAAATATAATTTAAATATTTTTTTTTTATTATCGAGTTAGCGTTTAAAAAAACCAct > 1:790478/1‑147 (MQ=255) cATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTTGATTTAAAAATATAAATTAAATATTTTTTTTTTTATATAGAGTTAAAGATCAAAAAAAAGaaaaaaata > 1:1642836/1‑143 (MQ=255) aTAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGATTTGAAAAAATAATGTAAATATTTTTTTTTTAATATAGCGATAAAGATCACAAAAACCACAatattac > 1:1098991/1‑145 (MQ=255) tAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAAAATAATTAAAATATTTTTTTTTTAATATAGAGATAAAGATCACAAAAAAGACAAAATTaaa > 2:3058623/1‑148 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGaaaa < 2:1444676/148‑1 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGGTTTGAAAAAAAAATTAAAATAATTTTTTTTTAATATAGTGATAACGATCAAAAAAAACACAATAATaaaa > 1:1304228/1‑148 (MQ=255) ccgccgCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACTTACTTTTTCATATCCTGTCGTTTTTTTTCGATTTCAAAATAAAATTAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAatt < 2:748416/148‑1 (MQ=255) ccccgcGCGGGGCGTTGTACACCATCTGCTTTGACGACACCACGTACATTTTCAAAGCCGTTCGTTTGTTTTCGATTTCAAAATAAAATGAATTTATTTTTTTTTAAATATCGACAAAACGATCACAAACACGACAATATGAAAatta < 2:2710994/146‑1 (MQ=255) cgcTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCga < 2:2222026/148‑1 (MQ=255) cgcTGTGCGTTGTTCAGCATCTGCTTTGTCGAAACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCga < 2:3343521/148‑1 (MQ=255) cgcTGTGCGTTGTTCAGCATCGGCTTTGTCGATACCCCTTAAATTTGCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAAAAAAACGACAATATGAAAATTATTCga < 1:576858/148‑1 (MQ=255) cTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTTGATTTAAAAATATAAATTAATTTTTTTTTTTTAAATATACTGATAAGGATCACAAAAAATACAATATTAAAaatattttagg > 1:2443427/1‑143 (MQ=255) cTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATTAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAACACGACAATATGAAAATTATTCgagg < 2:3186300/148‑1 (MQ=255) gtgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCgaggag < 2:1629142/148‑1 (MQ=255) gtgCGTTGTTCACAATCTGATTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCgaggag < 2:1626843/148‑1 (MQ=255) tgCGTTGATCACCATCTGCTTTGCCTAGACCACTTACTTTTTAATATCCTGGGGTTTGTTTTCGATTTCAAAATATAATGAATTTTTTTGTTTTTAAATATCGATATAACGAGCACAAAAACGACAATATGAAAATTATTCGAGGAGt < 2:3014543/148‑1 (MQ=255) tgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTAAAAAAATAAATAAAATATTTTTTTTTAAATATAGAGATAAACATAACAAAAAAGACAATAAGAAAATTATTAGAGGAGTGAAAg > 2:412810/1‑148 (MQ=255) gaaTCTGATTTGTCGATACCACGTACATTTTAATATCCTGTGTTTTTTTTTCTTTTTCAAAATATAATTAAATTTTTTTTTTTTAAATATCGAGATAACGAACACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑aaaa < 1:1765019/146‑1 (MQ=255) gCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGGATTTGAAAATATAATGAAAATAATTTTTTTTAAATATCGAGTTAAACATCACAAAAAAGTAAAAATTAAAATTATTAGAGGAGGGTAAGGC‑aaat > 2:2753849/1‑147 (MQ=255) gCATCGGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑aaaa < 2:2266720/148‑1 (MQ=255) cATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTTGATTTGAAAAAATAATTAAAATATTTTTTTTTTTATATAGAGATAAACATCACAAAAAACACAAAATTAAAAATATTAGAGGCGGGGAAGGG‑caaaa > 2:2464345/1‑148 (MQ=255) cATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTCAAAATATAATGAAAATATTTTTTTTTAAAAATAGAGATAAACATCACAAAAAACAAAAAATGTAAATTATTAGAGGAGTGGAAGGC‑caaaa > 2:1140998/1‑148 (MQ=255) tttgctaTACCACGTACTTTTTAATATCCTGTCGTTTGTTTTCGATTAAAAAATATAATCAATTTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCt < 2:1594898/142‑1 (MQ=255) tGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCTATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTc < 2:2932144/148‑1 (MQ=255) gATACCACTAAATTTTTAATATCCTGTGTTTTTTTTTCTATTACAAAATATAATCAATTTTTTTTTTTTTAAATATCGAGATAACTATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGa < 1:2525427/148‑1 (MQ=255) aTACCACGTACATTTTCATATCCTGTCTTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCTAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGAt < 2:52548/148‑1 (MQ=255) cACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAAATAAATTATTTTTTTTTAAATTTAGAGATAAACATCACAAAAAACACCATATGAAAATTAATCGAGGTGTGAAATGC‑AAAAAAAAGGCCTCCCGCTAggg > 2:1439225/1‑148 (MQ=255) aCGTAAATTTTCTTATCCTGTCGTTTGTTTTCTATTACAAAATATAATGAATTTATTTTTTTTTAAATATCGATATAACGATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGa < 2:371681/148‑1 (MQ=255) ttaaaTTTTCATATCCTTTCTTTTGTTTTCTATTACAAAATATAATTAAATTTTTTGTTTTTAAATATCGATATAACTATAACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAg < 2:1021525/144‑1 (MQ=255) taatttttCATATCCTTTCTTTTTTTTTCTATTTAAAAATATAATTAAATTATTTTTTTTTAAATATCGAGATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGc < 1:875025/144‑1 (MQ=255) aaaTTTTCATATCCTGTCTTTTTTTTTCTATTTAAAAATATAATTAAATTTTTTGTTTTTAAATATCGAGATAACGAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGcc < 1:582719/146‑1 (MQ=255) atttttCATATCCTGTCGTTTTTTTTCTATTAAAAAATATAATCAATTTATTTTTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCg < 1:1504455/146‑1 (MQ=255) ttttaCATTTCCTGTATTTTTTTTTCTATTTAAAAATATATTTAATTTATTTTTTTTTAAATTTCGATATAACGAAAAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGt < 1:3398176/147‑1 (MQ=255) ttaaatatCCTGTCTTTTGTTTTCTATTAAAAAATATAATTAAATTTTTTTTTTTTAAATATCTATATAACTATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAg < 1:2312471/144‑1 (MQ=255) cATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaa < 2:589880/148‑1 (MQ=255) gTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGcgcg > 2:242326/1‑148 (MQ=255) cGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtg > 2:186809/1‑148 (MQ=255) gtttttttTCTATTTAAAAATATAATGAAATTATTTTTTTTTAAATATCGATATAACTATAACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtg < 1:2328414/148‑1 (MQ=255) gtttgtttTCGATTACAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtgt < 2:219084/148‑1 (MQ=255) tttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt > 1:2762880/1‑148 (MQ=255) ttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 1:1627286/1‑148 (MQ=255) tgtttTAGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt < 2:1906363/148‑1 (MQ=255) ttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATg > 1:3136376/1‑148 (MQ=255) tattaaaaaaTAAAAAAAATTTTTTTTTTTTTAATAAAGGATATAACTATAAAAACAACGACAATATGAAAATTATTCTAGTAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCg < 1:932876/142‑1 (MQ=255) aTTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 1:798161/1‑148 (MQ=255) tttCAAAATATAATGAAATTATTTGTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa > 1:1060851/1‑148 (MQ=255) tttCAAAATATAATGAAATTATTTGTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa > 1:2840264/1‑148 (MQ=255) ttCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt > 2:3365800/1‑148 (MQ=255) cAAAATATAATAAATTTTTTTTTTTTTAAATATCGATAAACCTAACACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGc < 1:743128/148‑1 (MQ=255) aaaTATAATTAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg < 2:1592120/148‑1 (MQ=255) aaaTATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 1:501459/1‑148 (MQ=255) aaTATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AATAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgt > 1:3327490/1‑148 (MQ=255) atatAATCAAATTATTTGTTTTTAAATATCGAGATAACGAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtg < 1:2960079/148‑1 (MQ=255) taaatacaaaTTATTTGTTTTAAATTATCGAAAAAACCAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt < 1:2753849/141‑1 (MQ=255) taATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATCGGGAAGCCGTAGCAAAGTGGGCGGGTTTTTATGCCGGATGCGGTGTaa > 2:38026/1‑148 (MQ=255) taATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTaa > 1:2987233/1‑148 (MQ=255) taATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTaa > 2:2901638/1‑148 (MQ=255) tGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGGTTTTATGCCGGATGCGGTGTAAACa > 1:1816766/1‑148 (MQ=255) aaaTTATTTGTTTTTAAATATCGAGATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATa < 2:1234859/148‑1 (MQ=255) aaTTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATAc > 2:3556229/1‑148 (MQ=255) attattTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACg < 1:2060197/148‑1 (MQ=255) ttattTGTTTTTAAATATCGAGATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGt < 2:3290657/148‑1 (MQ=255) ttattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGt > 1:2385624/1‑148 (MQ=255) ttattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGt > 2:981132/1‑148 (MQ=255) ttattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGt > 2:980813/1‑148 (MQ=255) attTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTgg > 1:2713424/1‑148 (MQ=255) tttGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACTGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGc > 1:2262199/1‑148 (MQ=255) tttGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTGTTTATGCCGGATGCGGTGTAAACATACGTGGc > 2:2402477/1‑148 (MQ=255) tttttttAAATATCGAGAAAACCAACACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAg < 1:1631616/146‑1 (MQ=255) tGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAg > 1:1338965/1‑148 (MQ=255) ttttAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGc > 1:786602/1‑148 (MQ=255) tttAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCACAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCt > 1:52503/1‑148 (MQ=255) tttAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCt > 1:1855681/1‑148 (MQ=255) aaaTATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATg > 2:3038724/1‑148 (MQ=255) atatCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTa < 1:3495195/148‑1 (MQ=255) atatCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTa < 2:3527437/148‑1 (MQ=255) atatCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTa > 2:1891927/1‑148 (MQ=255) tatCGATATAACGAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg < 1:821064/148‑1 (MQ=255) tatCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg > 1:11224/1‑148 (MQ=255) tatCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg > 1:2125147/1‑148 (MQ=255) tatCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg > 2:3239317/1‑148 (MQ=255) atCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAgg > 1:2335713/1‑148 (MQ=255) atCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGAGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAgg > 2:1964279/1‑148 (MQ=255) cGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCa > 2:2636134/1‑148 (MQ=255) gaTAACGCTCACAAACACGACAAGATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGa < 2:135343/148‑1 (MQ=255) gaTAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGa > 2:2529657/1‑148 (MQ=255) | GATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGA > CP009273/2170602‑2170896 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |