Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,319,752 C→A 100% N55K (AAC→AAA atoB → acetyl‑CoA acetyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,319,7520CA98.2% 704.7 / 3.2 224N55K (AAC→AAAatoBacetyl‑CoA acetyltransferase
Reads supporting (aligned to +/- strand):  ref base C (2/2);  new base A (116/104);  total (118/106)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.54e-01
Rejected as polymorphism: Frequency below/above cutoff threshold.

Only 100 of 224 total aligned reads displayed.

TCAGTGCGGTACGTACTGCTATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCA  >  CP009273/2319607‑2319895
                                                                                                                                                 |                                                                                                                                               
tCAGTGCGGTACGTACTGCTATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAgt                                                                                                                                               <  1:2962645/148‑1 (MQ=255)
tCAGTGCGGTACGTACTGCTATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAgt                                                                                                                                               <  2:1676822/148‑1 (MQ=255)
 cAGTGCGGTACGTACTGCTATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAgtg                                                                                                                                              <  1:2132291/148‑1 (MQ=255)
 cAGTGCGGTACGTACTGCTATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAgtg                                                                                                                                              >  2:2966212/1‑148 (MQ=255)
 cAGTGCGGTACGTACTGCTATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAgtg                                                                                                                                              >  2:1511493/1‑148 (MQ=255)
  aGTGCGGTACGTACTGCTATCGGTAGTTTTAACAGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAgtgt                                                                                                                                             <  1:1708219/148‑1 (MQ=255)
   gTGCGGTACGTACTGCTATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGtt                                                                                                                                            >  1:2564607/1‑148 (MQ=255)
   gTGCGGTACGTACTGCTATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGtt                                                                                                                                            <  2:3163120/148‑1 (MQ=255)
   gTGCGGTACGTACTGCTATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGtt                                                                                                                                            >  2:1138769/1‑148 (MQ=255)
    tGCGGTACGTACTGCTATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTa                                                                                                                                           >  1:2040758/1‑148 (MQ=255)
      cGGTACGTACTGCTATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACa                                                                                                                                         <  1:1884825/148‑1 (MQ=255)
         tacgtacTGCTATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGc                                                                                                                                      >  1:1289418/1‑148 (MQ=255)
             tacTGCTATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCggg                                                                                                                                  >  2:2202071/1‑148 (MQ=255)
              acTGCTATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTACTTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGc                                                                                                                                 >  1:2060112/1‑148 (MQ=255)
              acTGCTATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATTAAGTGATTATGGGTAAAGTGTTACAAGCCGGGc                                                                                                                                 >  1:2957269/1‑148 (MQ=255)
              acTGCTATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATTAAGTGATTATGGGTAAAGTGTTACAAGCCGGGc                                                                                                                                 >  1:2958204/1‑148 (MQ=255)
              acTGCTATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGc                                                                                                                                 >  1:3350130/1‑148 (MQ=255)
                  cTATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTggg                                                                                                                             <  1:1351211/148‑1 (MQ=255)
                   tATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTgggg                                                                                                                            <  2:553592/148‑1 (MQ=255)
                      cGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCaa                                                                                                                         <  2:2007265/148‑1 (MQ=255)
                      cGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCaa                                                                                                                         <  1:2816463/148‑1 (MQ=255)
                        gTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCTACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCaaaa                                                                                                                       >  2:1636875/1‑148 (MQ=255)
                        gTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCaaaa                                                                                                                       >  2:1537410/1‑148 (MQ=255)
                         tAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAAt                                                                                                                      <  2:326519/148‑1 (MQ=255)
                            ttttAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCg                                                                                                                   <  1:545634/148‑1 (MQ=255)
                                aaCGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGgcgc                                                                                                               >  2:109276/1‑148 (MQ=255)
                                  cGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGt                                                                                                             >  1:3168219/1‑148 (MQ=255)
                                     ttCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAg                                                                                                          >  1:439121/1‑148 (MQ=255)
                                      tCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAgg                                                                                                         >  1:449505/1‑148 (MQ=255)
                                      tCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAgg                                                                                                         >  1:1730595/1‑148 (MQ=255)
                                        aCTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCa                                                                                                       <  2:2532941/148‑1 (MQ=255)
                                            gCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGt                                                                                                   >  2:1586012/1‑148 (MQ=255)
                                            gCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGt                                                                                                   <  1:669546/148‑1 (MQ=255)
                                              ttCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTa                                                                                                 <  2:2673917/148‑1 (MQ=255)
                                               tCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCTTTGAACGTGCAAAAATCGATTCACAACACTTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTaa                                                                                                <  2:1872105/148‑1 (MQ=255)
                                               tCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTaa                                                                                                >  1:2713552/1‑148 (MQ=255)
                                                 caccaGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTaaaa                                                                                              >  1:470056/1‑148 (MQ=255)
                                                  accaGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCGGGGGCAAAATCCGGCGCGTCAGGCACTGTTaaaaa                                                                                             >  1:134402/1‑148 (MQ=255)
                                                    caGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGc                                                                                           >  1:1013086/1‑148 (MQ=255)
                                                      gcgcCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCgg                                                                                         <  2:151108/148‑1 (MQ=255)
                                                      gcgcCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCgg                                                                                         <  1:1224380/148‑1 (MQ=255)
                                                       cgcCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCggg                                                                                        <  1:1112999/148‑1 (MQ=255)
                                                        gcCATCGACCTGGGGGCGACAGTAATTACAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGc                                                                                       <  1:1573107/148‑1 (MQ=255)
                                                         ccATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCt                                                                                      >  2:1221744/1‑148 (MQ=255)
                                                           aTCGACCTGGGGGCGACAGTACTTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTgg                                                                                    <  1:1067432/148‑1 (MQ=255)
                                                           aTCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTgg                                                                                    <  1:1066755/148‑1 (MQ=255)
                                                            tCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGc                                                                                   >  2:242757/1‑148 (MQ=255)
                                                              gACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAg                                                                                 <  2:2871810/148‑1 (MQ=255)
                                                                ccTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGaa                                                                               <  1:1937961/148‑1 (MQ=255)
                                                                ccTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGaa                                                                               <  1:1563568/148‑1 (MQ=255)
                                                                  tGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAAc                                                                             >  2:602699/1‑148 (MQ=255)
                                                                   gggggCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACg                                                                            <  1:3325615/148‑1 (MQ=255)
                                                                    ggggCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACgg                                                                           >  2:2617482/1‑148 (MQ=255)
                                                                     gggCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGgt                                                                          <  2:804551/148‑1 (MQ=255)
                                                                      ggCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGgtg                                                                         >  2:1384984/1‑148 (MQ=255)
                                                                          aCAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCg                                                                     >  2:372812/1‑148 (MQ=255)
                                                                               aaTTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTc                                                                >  2:105002/1‑148 (MQ=255)
                                                                               aaTTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTc                                                                <  2:2541647/148‑1 (MQ=255)
                                                                               aaTTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTc                                                                >  2:1425064/1‑148 (MQ=255)
                                                                               aaTTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGAAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCTCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGAtta                                                                >  1:2464316/1‑147 (MQ=255)
                                                                                aTTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCa                                                               <  2:2828052/148‑1 (MQ=255)
                                                                                aTTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCa                                                               <  1:1307276/148‑1 (MQ=255)
                                                                                aTTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCa                                                               <  1:1900467/148‑1 (MQ=255)
                                                                                 ttAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCAc                                                              <  1:3092215/148‑1 (MQ=255)
                                                                                 ttAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCAc                                                              >  1:326644/1‑148 (MQ=255)
                                                                                  tAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACg                                                             <  1:3085191/148‑1 (MQ=255)
                                                                                     aGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTc                                                          >  2:2926976/1‑148 (MQ=255)
                                                                                      gccgccATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGTAGAAACGGTGTGCGGATTCACGGTCa                                                         <  2:743730/148‑1 (MQ=255)
                                                                                      gccgccATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCa                                                         >  1:313039/1‑148 (MQ=255)
                                                                                      gccgccATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCa                                                         <  1:3466237/148‑1 (MQ=255)
                                                                                      gccgccATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCa                                                         <  1:2783510/148‑1 (MQ=255)
                                                                                       ccgccATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCaa                                                        <  2:1299912/148‑1 (MQ=255)
                                                                                        cgccATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAAt                                                       >  1:1231940/1‑148 (MQ=255)
                                                                                          ccATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATaa                                                     <  1:3376414/148‑1 (MQ=255)
                                                                                           cATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATaaa                                                    <  2:2413032/148‑1 (MQ=255)
                                                                                           cATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATaaa                                                    >  2:3374862/1‑148 (MQ=255)
                                                                                             ttGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGt                                                  >  1:755452/1‑148 (MQ=255)
                                                                                                aaCGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATCAAGTAtg                                               >  2:3548170/1‑148 (MQ=255)
                                                                                                  cGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTAtgtg                                             <  1:1639076/148‑1 (MQ=255)
                                                                                                    tGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGt                                           <  1:3236512/148‑1 (MQ=255)
                                                                                                     gCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTgggt                                          >  1:2088892/1‑146 (MQ=255)
                                                                                                         aaaTCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCggg                                      >  1:2643590/1‑148 (MQ=255)
                                                                                                         aaaTCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCggg                                      >  2:3245565/1‑148 (MQ=255)
                                                                                                           aTCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTc                                    >  1:2349260/1‑148 (MQ=255)
                                                                                                            tCGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCt                                   <  1:2588692/148‑1 (MQ=255)
                                                                                                             cGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCtt                                  <  1:3418398/148‑1 (MQ=255)
                                                                                                             cGATTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCtt                                  >  1:826315/1‑148 (MQ=255)
                                                                                                               aTTCACAACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTaa                                <  1:126445/148‑1 (MQ=255)
                                                                                                                  cacaACACGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAg                             <  2:3228185/148‑1 (MQ=255)
                                                                                                                    caacaCGTTGATTAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAgtg                           <  2:2957982/148‑1 (MQ=255)
                                                                                                                       cacGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTgg                        <  2:1033382/148‑1 (MQ=255)
                                                                                                                         cGTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGgcg                      >  1:3289979/1‑148 (MQ=255)
                                                                                                                          gTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGgcgc                     <  1:948793/148‑1 (MQ=255)
                                                                                                                          gTTGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGgcgc                     <  1:2501862/148‑1 (MQ=255)
                                                                                                                           ttGATGAAGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCt                    <  2:3099519/148‑1 (MQ=255)
                                                                                                                                  aGTGATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTgccgcc             <  1:1384984/148‑1 (MQ=255)
                                                                                                                                     gATTATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAg          <  1:808533/148‑1 (MQ=255)
                                                                                                                                       ttATGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGc        >  2:86084/1‑148 (MQ=255)
                                                                                                                                          tGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCAt     <  1:1161679/148‑1 (MQ=255)
                                                                                                                                          tGGGTAAAGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCAt     <  1:2940104/148‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                               
TCAGTGCGGTACGTACTGCTATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCA  >  CP009273/2319607‑2319895

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: