| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,323,622 | G→T | 9.8% | pseudogene (4260/4605 nt) | yfaS ← | pseudogene, bacterial alpha2‑macroglobulin YfaS variant family; putative membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,323,622 | 0 | G | T | 9.8% | 528.4 / 24.9 | 152 | pseudogene (4260/4605 nt) | yfaS | pseudogene, bacterial alpha2‑macroglobulin YfaS variant family; putative membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (53/84); new base T (6/9); total (59/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
Only 100 of 156 total aligned reads displayed.
TTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCATTTTTGCC > CP009273/2323476‑2323769 | ttttCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGa < 1:2581230/148‑1 (MQ=255)ttttCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGa > 2:2788130/1‑148 (MQ=255)ttttCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGa < 1:1742337/148‑1 (MQ=255)ttttCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTGGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGa > 2:2788278/1‑148 (MQ=255) tttCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGAt < 2:1720109/148‑1 (MQ=255) cAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCa > 2:387090/1‑148 (MQ=255) cAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCg > 2:1411531/1‑148 (MQ=255) aTTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCgag < 2:3522095/148‑1 (MQ=255) aTTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCgag < 2:1010965/148‑1 (MQ=255) ttGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGTCCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCgaga > 1:1313811/1‑148 (MQ=255) ttGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCgaga < 1:2734162/148‑1 (MQ=255) ttGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCgaga > 2:27376/1‑148 (MQ=255) ttGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCgaga < 1:850132/148‑1 (MQ=255) ttGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCgaga < 1:850229/148‑1 (MQ=255) tGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTTATTTCATCGAGAt < 2:1493816/148‑1 (MQ=255) tGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGAt > 2:817745/1‑148 (MQ=255) tGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGAt < 2:989515/148‑1 (MQ=255) ccccTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCAAGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATAc > 1:637379/1‑148 (MQ=255) gctgTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAgcgc < 1:1015584/148‑1 (MQ=255) gctgTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAgcgc < 1:2854879/148‑1 (MQ=255) ctgTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCa > 2:2378436/1‑148 (MQ=255) tttCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCg < 2:918207/148‑1 (MQ=255) tttCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCg < 2:918015/148‑1 (MQ=255) ggcgTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCa < 1:2930309/148‑1 (MQ=255) ggcgTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCa < 1:2930353/148‑1 (MQ=255) ggcgTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCa < 2:767225/148‑1 (MQ=255) gTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGATGTCAAtc < 1:27376/148‑1 (MQ=255) gggTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCa < 2:3498759/148‑1 (MQ=255) ggTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCAt < 1:3591/148‑1 (MQ=255) tttATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTg < 2:812659/148‑1 (MQ=255) ttATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGc > 1:1905576/1‑148 (MQ=255) ttGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTgg < 1:3063155/148‑1 (MQ=255) tGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGt < 2:555059/148‑1 (MQ=255) tGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGt < 2:555191/148‑1 (MQ=255) gACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTc < 1:3436321/148‑1 (MQ=255) ccGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCAc < 2:3241208/148‑1 (MQ=255) aaaTGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCgg < 2:561235/148‑1 (MQ=255) aaaTGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCgg < 1:1210841/148‑1 (MQ=255) aaaTGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCgg < 1:1211073/148‑1 (MQ=255) aTGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCgg < 2:1903517/146‑1 (MQ=255) aTGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCgg > 1:1063036/1‑146 (MQ=255) aTGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCgg < 2:1063036/146‑1 (MQ=255) aTGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGtt > 2:630925/1‑148 (MQ=255) tGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTg > 2:3411369/1‑148 (MQ=255) ccATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGa < 1:1584751/148‑1 (MQ=255) ccATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGa < 2:3212362/148‑1 (MQ=255) ccATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGa < 1:1348599/148‑1 (MQ=255) ccATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGa < 2:275795/148‑1 (MQ=255) cATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGaa < 2:3400337/148‑1 (MQ=255) cATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGaa < 1:3336295/148‑1 (MQ=255) aTGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAAt > 2:245617/1‑148 (MQ=255) tgttgtGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATa > 2:2933723/1‑148 (MQ=255) tgtgCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAg < 2:1461262/148‑1 (MQ=255) cTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCAtc > 1:242509/1‑148 (MQ=255) tCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCAtct < 1:2173004/148‑1 (MQ=255) tCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCAtct < 1:1571675/148‑1 (MQ=255) tCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCAtct < 1:316828/148‑1 (MQ=255) cAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCAtctc > 2:3050848/1‑148 (MQ=255) cAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCAtctc > 2:1274988/1‑148 (MQ=255) cGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCtcttc > 1:2591615/1‑148 (MQ=255) cGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCtcttc > 2:169435/1‑148 (MQ=255) gTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCtcttct < 2:946325/148‑1 (MQ=255) gTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCtcttct < 2:946346/148‑1 (MQ=255) gCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCAc < 2:706092/148‑1 (MQ=255) ggTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGa > 2:2597492/1‑148 (MQ=255) ggTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGa < 2:1851237/148‑1 (MQ=255) tGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATa < 1:1143095/148‑1 (MQ=255) tGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATa < 1:809305/148‑1 (MQ=255) ggCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATaa < 2:1271743/148‑1 (MQ=255) cGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTc > 2:3058318/1‑100 (MQ=255) ccACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTg < 1:1665050/148‑1 (MQ=255) cTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGt < 1:1411531/148‑1 (MQ=255) tAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACgg > 1:742756/1‑148 (MQ=255) aGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGt < 2:3553102/148‑1 (MQ=255) cgcAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCa < 2:2329761/148‑1 (MQ=255) aCTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCTACGGTCACCGGaa < 1:2555645/148‑1 (MQ=255) gCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGt > 1:1008815/1‑148 (MQ=255) gCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGt < 1:242874/148‑1 (MQ=255) cATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGCCACCGGTNGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGtt < 1:1811646/148‑1 (MQ=255) tCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTAc > 2:706516/1‑148 (MQ=255) tCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTAc < 1:387090/148‑1 (MQ=255) tGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACttt < 2:383908/148‑1 (MQ=255) gCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTttg > 1:45077/1‑148 (MQ=255) gCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTttg < 2:2330795/148‑1 (MQ=255) gCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTttg < 2:242509/148‑1 (MQ=255) cGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTttgttg > 1:2342187/1‑148 (MQ=255) gCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGa > 1:2298871/1‑148 (MQ=255) tGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGc < 1:817745/148‑1 (MQ=255) tGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGc > 2:2539993/1‑148 (MQ=255) tAAGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCAt < 1:2072873/148‑1 (MQ=255) tAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCAt > 2:1482291/1‑148 (MQ=255) tAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCAt > 1:2451776/1‑148 (MQ=255) tAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCAt > 1:2451775/1‑148 (MQ=255) aaGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCAtt > 2:1585570/1‑148 (MQ=255) aaGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCAtt < 1:2933723/148‑1 (MQ=255) aGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCAttt > 1:314617/1‑148 (MQ=255) cGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCAttttt < 2:1065122/148‑1 (MQ=255) gTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCATTTTTg > 1:1640488/1‑148 (MQ=255) gATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCATTTTTGcc > 1:3397707/1‑148 (MQ=255) gATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCATGTTTGcc > 1:3399179/1‑148 (MQ=255) | TTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCATTTTTGCC > CP009273/2323476‑2323769 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |