| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,539,673 | C→A | 10.0% | T181K (ACA→AAA) | murQ → | N‑acetylmuramic acid 6‑phosphate (MurNAc‑6‑P) etherase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,539,673 | 0 | C | A | 10.0% | 549.0 / 27.0 | 159 | T181K (ACA→AAA) | murQ | N‑acetylmuramic acid 6‑phosphate (MurNAc‑6‑P) etherase |
| Reads supporting (aligned to +/- strand): ref base C (62/81); new base A (6/10); total (68/91) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.92e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01 | |||||||||||
Only 100 of 166 total aligned reads displayed.
AGGATGTGGTGGTTGGCATTGCTGCCAGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAACCTGATGGTCGATGTGGTCGCCAC > CP009273/2539526‑2539820 | aGGATGTGGTGGTTGGCATTGCTGCCAGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTac < 1:819246/148‑1 (MQ=255) gATGTGGTGGTTGGCATTGCTGCCAGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTacac > 2:637290/1‑148 (MQ=255) aTGTGGTGGTTGGCATTGCTGCCAGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACAcc > 2:2363152/1‑148 (MQ=255) gtggtgGTTGGCATTGCTGCCAGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGa < 1:132907/148‑1 (MQ=255) tggtggTTGGCATTGCTGCCAGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGAt < 1:1081336/148‑1 (MQ=255) ggtggtTGGCATTGCTGCCAGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGAtt < 2:3043033/148‑1 (MQ=255) tggtTGGCATTGCTGCCAGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGt < 1:440652/148‑1 (MQ=255) ggtTGGCATTGCTGCCAGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTa < 2:1060651/148‑1 (MQ=255) gtTGGCATTGCTGCCAGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAg > 1:2501945/1‑148 (MQ=255) gtTGGCATTGCTGCCAGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAg > 2:1885759/1‑148 (MQ=255) ttGCTGCCAGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGa > 1:865938/1‑148 (MQ=255) ttGCTGCCAGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTAAACCGATTGTAGGTGCCGa > 2:2622958/1‑148 (MQ=255) gctgcCAGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAg < 2:2360299/148‑1 (MQ=255) tgcCAGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAgtt < 1:1839416/148‑1 (MQ=255) cAGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAgttgtt < 2:1194730/148‑1 (MQ=255) cAGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAgttgtt < 2:2572987/148‑1 (MQ=255) cAGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAgttgtt < 2:787759/148‑1 (MQ=255) aGCGGTCGCACTCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTa < 2:857325/148‑1 (MQ=255) aGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTa < 2:764810/148‑1 (MQ=255) cGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTAAACCGATTGTAGGTGCCGAAGTTGTTAcc > 1:2907096/1‑148 (MQ=255) gCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGttc < 1:3065145/148‑1 (MQ=255) aTGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGAt > 2:107788/1‑148 (MQ=255) aTGTGAGTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGAt < 2:808291/148‑1 (MQ=255) gtgATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGa > 1:1267247/1‑148 (MQ=255) gtgATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGa > 2:154725/1‑148 (MQ=255) gATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTAAACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGaaa < 2:3320699/148‑1 (MQ=255) gCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTAAACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAg < 2:200007/148‑1 (MQ=255) gCCGGACTGGAAGACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTAAACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAg < 2:199931/148‑1 (MQ=255) ccGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAgg > 1:2023441/1‑148 (MQ=255) gACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGTCGTTTCAACCACCGCTGAGTTTGCCATTAAACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTAc < 2:3022265/148‑1 (MQ=255) gACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTAc < 2:657228/148‑1 (MQ=255) ggAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAgcg > 2:2680589/1‑148 (MQ=255) aaTACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCa > 2:1678219/1‑148 (MQ=255) cgcCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTgg < 1:2045967/148‑1 (MQ=255) gcCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGt > 2:105362/1‑148 (MQ=255) tCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCaa < 2:1393701/148‑1 (MQ=255) tCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCaa > 2:2695207/1‑148 (MQ=255) cGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAat < 2:1865299/148‑1 (MQ=255) ggCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAata < 1:1144884/148‑1 (MQ=255) cTGCCGCACAGTGGGAATTTCCTGTAATCCGGTGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATg < 1:637246/148‑1 (MQ=255) cTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATg < 1:2979488/148‑1 (MQ=255) cTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATg < 1:3257914/148‑1 (MQ=255) tGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGc < 1:1003654/148‑1 (MQ=255) tGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGc < 1:1004799/148‑1 (MQ=255) gCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTAAACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCt < 2:475882/148‑1 (MQ=255) cacaGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTcc > 2:2630245/1‑148 (MQ=255) acaGTGGGAATGTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCa < 2:2633425/148‑1 (MQ=255) caGTGGGTATTTGCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGTTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCAc < 1:708270/148‑1 (MQ=255) tGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCgg > 2:1992020/1‑148 (MQ=255) tGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCgg > 1:2233270/1‑148 (MQ=255) tGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCgg > 1:2233297/1‑148 (MQ=255) gggAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCggg < 1:2198406/148‑1 (MQ=255) gggAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCggg < 1:239543/148‑1 (MQ=255) gggAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCggg > 1:2952597/1‑148 (MQ=255) gggAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCggg < 1:2039632/148‑1 (MQ=255) gggAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCggg > 1:484834/1‑148 (MQ=255) ggAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGc < 1:3117390/148‑1 (MQ=255) ggAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGc < 1:3392025/148‑1 (MQ=255) aaTTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCtg > 1:1107079/1‑148 (MQ=255) aTTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCtga < 2:1267247/148‑1 (MQ=255) ttCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCtgatg < 2:2103682/148‑1 (MQ=255) tCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCtgatga < 1:2618316/148‑1 (MQ=255) gTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTaa < 1:154725/148‑1 (MQ=255) gTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTaa > 2:561217/1‑148 (MQ=255) tCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATcc > 2:2029762/1‑148 (MQ=255) tCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATcc > 2:129617/1‑148 (MQ=255) ccGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCg > 1:90553/1‑148 (MQ=255) aGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAg < 2:2139729/148‑1 (MQ=255) gcgcCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGTAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAgt < 1:113765/148‑1 (MQ=255) cgcCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAgtg < 1:1544306/148‑1 (MQ=255) gcCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAgtgt < 2:1848700/148‑1 (MQ=255) ccGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGtt > 1:3232542/1‑148 (MQ=255) ccGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGtt > 2:2831572/1‑148 (MQ=255) ccGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGtt > 1:3232474/1‑148 (MQ=255) ccGTTTCAACCACCGCTGAGTTTGCCATTAAACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGtt > 2:689713/1‑148 (MQ=255) ccGTTTCAACCACCGCTGAGTTTGCCATTAAACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGtt > 2:689725/1‑148 (MQ=255) cGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTc > 2:2947946/1‑148 (MQ=255) tttCAACCACCGCTGAGTTTGCCATTACACCGATTTTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCgg < 1:2191618/148‑1 (MQ=255) tttCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCgg > 2:1618363/1‑148 (MQ=255) tttCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCgg > 2:1618364/1‑148 (MQ=255) ttCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGc > 1:1353688/1‑148 (MQ=255) aaCCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAAc > 2:2038347/1‑148 (MQ=255) accaccGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAAcc > 2:2667270/1‑148 (MQ=255) accaccGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAAcc < 1:691299/148‑1 (MQ=255) accaccGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAAcc < 1:444202/148‑1 (MQ=255) caccGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAACCTg < 1:2354360/148‑1 (MQ=255) caccGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAACCTg > 1:1531071/1‑148 (MQ=255) caccGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAACCTg > 2:3152090/1‑148 (MQ=255) ccGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAACCTGAt > 1:1239626/1‑148 (MQ=255) ccGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAACCTGAt > 2:3018765/1‑148 (MQ=255) ccGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAACCTGAt > 2:2747689/1‑148 (MQ=255) cTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAACCTGATGGt < 1:652223/148‑1 (MQ=255) gAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAACCTGATGGTCg < 2:3166994/148‑1 (MQ=255) aGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAACCTGATGGTCGa < 1:2666640/148‑1 (MQ=255) aGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAACCTGATGGTCGa < 1:869387/148‑1 (MQ=255) gTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAACCTGATGGTCGAt < 2:693653/148‑1 (MQ=255) gTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAACCTGATGGTCGAt < 2:2267706/148‑1 (MQ=255) tttGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAACCTGATGGTCGAtg < 2:3482192/148‑1 (MQ=255) tttGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAACCTGATGGTCGAtg < 2:2301249/148‑1 (MQ=255) cacCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAACCTGATGGTCGATGTGGTCGccac > 1:585280/1‑148 (MQ=255) | AGGATGTGGTGGTTGGCATTGCTGCCAGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAACCTGATGGTCGATGTGGTCGCCAC > CP009273/2539526‑2539820 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |