| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,675,664 | T→G | 6.2% | V147V (GTA→GTC) | yphG ← | DUF4380 domain‑containing TPR repeat protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,675,664 | 0 | T | G | 6.2% | 488.9 / 24.6 | 177 | V147V (GTA→GTC) | yphG | DUF4380 domain‑containing TPR repeat protein |
| Reads supporting (aligned to +/- strand): ref base T (74/92); new base G (5/6); total (79/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.45e-01 | |||||||||||
Only 100 of 178 total aligned reads displayed.
TTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAAT > CP009273/2675517‑2675810 | tttCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCt > 2:2335921/1‑148 (MQ=255) tCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTAc < 2:1041819/148‑1 (MQ=255) tGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCcac > 2:2216635/1‑148 (MQ=255) gCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCcaca > 1:1916299/1‑148 (MQ=255) ccGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCacac > 2:1345413/1‑148 (MQ=255) ggTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGt < 1:2052050/148‑1 (MQ=255) ttGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCt < 2:21016/148‑1 (MQ=255) tGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCtg > 1:3238759/1‑148 (MQ=255) tGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCtg > 1:174214/1‑148 (MQ=255) gCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCtgtg < 1:2701545/148‑1 (MQ=255) gCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCGACCCACACCGTCtgtg > 1:3334940/1‑148 (MQ=255) cccACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGc > 1:2229091/1‑148 (MQ=255) caccacAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCAc < 1:3507856/148‑1 (MQ=255) ccacAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCg > 2:1366564/1‑148 (MQ=255) cacaAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGt > 1:1011300/1‑148 (MQ=255) cacaAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGt > 1:1011059/1‑148 (MQ=255) acaAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTc < 2:2778884/148‑1 (MQ=255) acaAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTc < 2:606491/148‑1 (MQ=255) caAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTGGCCTACCCACACCGTCTGTGCACCGTCt > 2:3549894/1‑148 (MQ=255) caAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCt < 1:159191/148‑1 (MQ=255) aaGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCtt > 1:1897016/1‑148 (MQ=255) aaaTGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCCGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCAt > 1:508759/1‑148 (MQ=255) aTGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGNAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATgg > 1:1810916/1‑148 (MQ=255) aTGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATgg < 2:2084695/148‑1 (MQ=255) aCGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCt < 2:2251040/148‑1 (MQ=255) cgcgGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCtt < 1:485234/148‑1 (MQ=255) cgtggcgtTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCGACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAgg < 1:1414249/148‑1 (MQ=255) gtggcgtTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAggg < 1:1255843/148‑1 (MQ=255) tggcgtTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGt > 2:1472138/1‑148 (MQ=255) tggcgtTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGt < 2:2570544/148‑1 (MQ=255) cgtTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGaa > 2:617597/1‑148 (MQ=255) cgtTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGaa < 2:3533215/148‑1 (MQ=255) ttCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAAt > 1:359772/1‑148 (MQ=255) tCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATc > 1:2828971/1‑148 (MQ=255) tCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATc > 1:1100915/1‑148 (MQ=255) cGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAAc < 1:110627/148‑1 (MQ=255) cGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAAc < 2:1679696/148‑1 (MQ=255) ttATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACgg < 2:2405992/148‑1 (MQ=255) tataGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACggg < 2:2794930/148‑1 (MQ=255) taGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACTGGCa < 1:1958855/148‑1 (MQ=255) aGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCAt > 1:508605/1‑148 (MQ=255) cgcgGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATaaa < 2:1153159/148‑1 (MQ=255) gcgGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCGACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAg < 2:2031467/148‑1 (MQ=255) tGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAggtggt < 2:3132723/148‑1 (MQ=255) ggCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTc > 2:1611233/1‑148 (MQ=255) ggCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTc < 1:2020347/148‑1 (MQ=255) gCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCg > 1:1801739/1‑148 (MQ=255) ttCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCga > 2:2898926/1‑148 (MQ=255) ttCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCga < 1:3165945/148‑1 (MQ=255) ccAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCgatg < 1:823124/148‑1 (MQ=255) ccAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCgatg < 1:163702/148‑1 (MQ=255) ccAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCgatg < 1:2610680/148‑1 (MQ=255) gcgcCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGatgatg < 2:111602/148‑1 (MQ=255) cgccgcCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGt < 2:397471/148‑1 (MQ=255) cgccgcCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGt < 1:1195020/148‑1 (MQ=255) ccgccCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTg < 1:2810785/148‑1 (MQ=255) gccCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCGACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCg < 2:2179624/148‑1 (MQ=255) cGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGcc < 2:2466736/148‑1 (MQ=255) gggCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTaa < 1:606020/148‑1 (MQ=255) ggCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTaaa > 1:2099060/1‑148 (MQ=255) ggCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTaaa > 1:304768/1‑148 (MQ=255) ggCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTaaa < 1:2862778/148‑1 (MQ=255) ggCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTaaa > 1:1297274/1‑148 (MQ=255) cgcAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATCAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACt > 2:2871824/1‑148 (MQ=255) cgcAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACt < 2:1857534/148‑1 (MQ=255) cgcAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACt > 2:1092807/1‑148 (MQ=255) cgcAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCCTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACt < 1:2180648/148‑1 (MQ=255) cAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCa < 2:2644863/148‑1 (MQ=255) cAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCa < 2:2172770/148‑1 (MQ=255) ggTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATc > 2:2817197/1‑148 (MQ=255) ggTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATc > 2:2968450/1‑148 (MQ=255) ggTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATc < 2:1054880/148‑1 (MQ=255) ggTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATc > 2:483732/1‑148 (MQ=255) tGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATccc > 2:1817924/1‑148 (MQ=255) gAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCa > 1:1981377/1‑148 (MQ=255) aCCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCg > 1:2106673/1‑148 (MQ=255) tGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGaa < 2:3415503/148‑1 (MQ=255) gTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGaaa < 1:1472138/148‑1 (MQ=255) tcatcaCCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAAt > 1:994517/1‑148 (MQ=255) tcatcaCCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAAt > 1:2927934/1‑148 (MQ=255) atcaCCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATcc > 2:3367555/1‑148 (MQ=255) ccTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACgg < 2:848500/148‑1 (MQ=255) tGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGcc > 2:73162/1‑148 (MQ=255) gTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGccc < 2:2209721/148‑1 (MQ=255) gTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGccc > 2:949087/1‑148 (MQ=255) gTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGccc > 2:762811/1‑148 (MQ=255) gTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGccc < 2:1011059/148‑1 (MQ=255) gTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGccc < 2:1011366/148‑1 (MQ=255) aaaCAATGCATCGGCTCCGTTTCGCCGACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCca > 2:2202378/1‑148 (MQ=255) aaCCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCcag > 2:3135568/1‑148 (MQ=255) aaCCATGAATCGGCTCCGTTTAGCATACCCACACCGTCTGTGCACAGTCTTCATAGGCTTCGAGGTTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATTTAGCGGCCAGATAAACTCAATCCCACAGGAAATCCACGGCCAcag > 2:230455/1‑148 (MQ=255) cTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAACTCCACGGCCCCAGCAGCCCCACCAgc > 2:2116348/1‑148 (MQ=255) ccGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAgcgc > 2:2897813/1‑148 (MQ=255) ccGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAgcgc < 1:1148361/148‑1 (MQ=255) tttCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAgg < 1:2972488/148‑1 (MQ=255) ttCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGt > 2:1034393/1‑148 (MQ=255) tCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGtt < 1:902589/148‑1 (MQ=255) ccTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTaa < 2:3238715/148‑1 (MQ=255) ccTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTaa < 2:3238759/148‑1 (MQ=255) ccTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTaa < 1:2371287/148‑1 (MQ=255) | TTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGCAGGGTGAAACCTGTCATCACCTGTAAACCATGCATCGGCTCCGTTTCGCCTACCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAAT > CP009273/2675517‑2675810 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |