| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,882,054 | C→A | 7.0% | D469Y (GAT→TAT) | cysI ← | sulfite reductase, beta subunit, NAD(P)‑binding, heme‑binding |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,882,054 | 0 | C | A | 7.0% | 637.8 / 16.5 | 171 | D469Y (GAT→TAT) | cysI | sulfite reductase, beta subunit, NAD(P)‑binding, heme‑binding |
| Reads supporting (aligned to +/- strand): ref base C (75/84); new base A (5/7); total (80/91) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.72e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
Only 100 of 172 total aligned reads displayed.
ATCCGTGGGATACGTGTCCCAATGCGGTTGCCGCCAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCACGCTGCGGCGTGACGGCATTCATTAA > CP009273/2881909‑2882201 | aTCCGTGGGATACGTGTCCCAATGCGGTTGCCGCCAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGc < 2:2028878/148‑1 (MQ=255)aTCCGTGGGATACGTGTCCCAATGCGGTTGCCGCCAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGc < 1:824978/148‑1 (MQ=255) tCCGTGGGATACGTGTCCCAATGCGGTTGCCGCCAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCt > 2:1920165/1‑148 (MQ=255) tCCGTGGGATACGTGTCCCAATGCGGTTGCCGCCAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCt > 1:177446/1‑148 (MQ=255) ccGTGGGATACGTGTCCCAATGCGGTTGCCGCCAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTg < 1:2318581/148‑1 (MQ=255) cGTGGGATACGTGTCCCAATGCGGTTGCCGCCAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGa < 1:3119972/148‑1 (MQ=255) ggATACGTGTCCCAATGCGGTTGCCGCCAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACAcc < 1:908433/148‑1 (MQ=255) gATACGTGTCCCAATGCGGTTGCCGCCAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCa > 2:1396810/1‑148 (MQ=255) gATACGTGTCCCAATGCGGTTGCCGCAAAGATGCAGGTTGGAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCTGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCa < 2:2656735/148‑1 (MQ=255) tACGTGTCCCAATGCGGTTGCCGCCAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATg < 1:1650094/148‑1 (MQ=255) cGTGTCCCAATGCGGTTGCCGCCAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGtt < 2:3157252/148‑1 (MQ=255) gtgtCCCAATGCGGTTGCCGCCAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGttt < 2:344620/148‑1 (MQ=255) tgtCCCAATGCGGTTGCCGCCAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTc > 1:1722437/1‑148 (MQ=255) tCCCAATGCGGTTGCCGCCAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGc < 1:717939/148‑1 (MQ=255) aTGCGGTTGCCGCCAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTa > 2:3342236/1‑148 (MQ=255) aTGCGGTTGCCGCCAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTa > 2:3342251/1‑148 (MQ=255) ggTTGCCGCCAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAAtt < 1:2216755/148‑1 (MQ=255) ggTTGCCGCCAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAAtt < 2:3263699/148‑1 (MQ=255) ttGCCGCCAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTAt < 1:2743688/148‑1 (MQ=255) ccgccAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGa > 1:2005311/1‑148 (MQ=255) ccgccAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATAGCTGACACCATGTTTCGCCATTAAATTATCGa < 2:2821673/148‑1 (MQ=255) gccAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGAtg > 2:2986736/1‑148 (MQ=255) gccAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGAtg > 2:2986651/1‑148 (MQ=255) cAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGAtgtt < 1:2304720/148‑1 (MQ=255) aaGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGAtgttg < 2:352163/148‑1 (MQ=255) aGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGAtgttgt < 1:226606/148‑1 (MQ=255) gATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTc > 1:2227473/1‑148 (MQ=255) cAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATa > 1:2907838/1‑148 (MQ=255) cAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATACTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATa > 2:1893378/1‑148 (MQ=255) cAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATACTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATa > 2:2135008/1‑148 (MQ=255) ggTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATaaa < 1:1599234/148‑1 (MQ=255) ttGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAg < 2:2137238/148‑1 (MQ=255) tGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGa < 1:538496/148‑1 (MQ=255) tGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGa < 2:1436180/148‑1 (MQ=255) tGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGa < 2:1436115/148‑1 (MQ=255) tGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGa < 1:1031459/148‑1 (MQ=255) tGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGa < 1:2437387/148‑1 (MQ=255) gTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGAc < 1:2234834/148‑1 (MQ=255) gCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGc > 1:3456866/1‑148 (MQ=255) cGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCa > 2:1626271/1‑148 (MQ=255) aCCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAgg > 2:3514875/1‑148 (MQ=255) cccGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGa > 2:662307/1‑148 (MQ=255) ccGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGaa < 2:1463641/148‑1 (MQ=255) cGGCGCTTGACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGaaa < 2:1980595/148‑1 (MQ=255) gcTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGct < 1:2753837/148‑1 (MQ=255) cTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGctc > 1:66909/1‑148 (MQ=255) cTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGctc > 2:1213669/1‑148 (MQ=255) tttACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGctct > 1:123555/1‑148 (MQ=255) ttACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTg < 2:1852196/148‑1 (MQ=255) aCCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCt > 1:920507/1‑148 (MQ=255) caccaGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTcc > 1:1788712/1‑148 (MQ=255) ccaGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGc > 2:2612644/1‑148 (MQ=255) caGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGcc > 1:133717/1‑148 (MQ=255) ggCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCAt < 1:631167/148‑1 (MQ=255) ggCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCAt < 1:631179/148‑1 (MQ=255) cTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAg < 2:2202463/148‑1 (MQ=255) cTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATAGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAg < 1:673847/148‑1 (MQ=255) gCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGt > 2:1194138/1‑148 (MQ=255) gCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGt < 1:1507808/148‑1 (MQ=255) aTCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCg < 2:2306057/148‑1 (MQ=255) aTCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCg < 2:3100183/148‑1 (MQ=255) tCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCgg < 2:771917/148‑1 (MQ=255) cgcgACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGaa > 1:1813601/1‑148 (MQ=255) gACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGa < 1:3535987/148‑1 (MQ=255) gACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGa < 1:3535586/148‑1 (MQ=255) acaACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACg < 1:1009102/148‑1 (MQ=255) aaCCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCa < 1:1744385/148‑1 (MQ=255) aaCCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCa > 1:2123759/1‑148 (MQ=255) ttCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCa < 1:2986736/148‑1 (MQ=255) ttCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCa < 1:2986651/148‑1 (MQ=255) ttCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCa < 2:1942834/148‑1 (MQ=255) gCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAg > 2:3298823/1‑148 (MQ=255) gCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAg > 1:2393944/1‑148 (MQ=255) cAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGt > 1:3075839/1‑148 (MQ=255) cAGCCTGTTACACGCATCACGATATGCTCATAGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGt < 1:2577125/148‑1 (MQ=255) gCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGttt > 2:2556161/1‑148 (MQ=255) tGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCa > 1:2725635/1‑148 (MQ=255) tGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCa > 2:1314046/1‑148 (MQ=255) gTTACACGCATCACGATATGCTCATAGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCAc > 1:1381927/1‑148 (MQ=255) gTTACACGCATCACGATATGCTCATAGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCAc > 1:1382208/1‑148 (MQ=255) tACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCACGc > 2:1623308/1‑148 (MQ=255) cacGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCACGCTg > 2:2974023/1‑148 (MQ=255) aTCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCACGCTgcggcg < 2:2481655/148‑1 (MQ=255) aTCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCACGCTgcggcg < 2:2481456/148‑1 (MQ=255) cACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCACGCTGCGGCGTg < 1:75350/148‑1 (MQ=255) cACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCACGCTGCGGCGTg < 1:3342251/148‑1 (MQ=255) atatGCTCATAGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCACGCTGCGGCGTGACgg > 2:1712330/1‑148 (MQ=255) atGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCACGCTGCGGCGTGACGGca > 2:3098303/1‑148 (MQ=255) atGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCACGCTGCGGCGTGACGGca < 2:2935204/148‑1 (MQ=255) atGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCACGCTGCGGCGTGACGGca < 2:2934189/148‑1 (MQ=255) atGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCACGCTGCGGCGTGACGGca < 2:3456866/148‑1 (MQ=255) tGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCACGCTGCGGCGTGACGGcat < 2:2509445/148‑1 (MQ=255) tGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCACGCTGCGGCGTGACGGcat < 2:1100554/148‑1 (MQ=255) gCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCACGCTGCGGCGTGACGGcatt > 2:1640070/1‑148 (MQ=255) gCTCATAGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGTAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCACGCTGCGGCGTGACGGcatt < 1:70328/148‑1 (MQ=255) gCTCATAGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCACGCTGCGGCGTGACGGcatt < 1:3246/148‑1 (MQ=255) cTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGTCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCACGCTGCGGCGTGACGGcattc < 2:2291479/148‑1 (MQ=255) cATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCACGCTGCGGCGTGACGGcattcat > 1:1686759/1‑148 (MQ=255) aTCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCACGCTGCGGCGTGACGGcattcatt > 1:2284698/1‑148 (MQ=255) cGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCACGCTGCGGCGTGACGGCATTCATTaa > 1:1152889/1‑148 (MQ=255) | ATCCGTGGGATACGTGTCCCAATGCGGTTGCCGCCAAGATGCAGGTTGTAGCGACCCGGCGCTTTACCCACCAGGCCCACTTCCGCCAGCATCGCGCGACCACAACCGTTCGGGCAGCCTGTTACACGCATCACGATATGCTCATCGCTGACACCATGTTTCGCCATTAAATTATCGATGTTGTCGATAAAAGACGGCAGGAAACGCTCTGCTTCCGCCATCGCCAGCGGGCAAGTCGGGAATGACACGCAAGCCATCGAGTTTTCACGCTGCGGCGTGACGGCATTCATTAA > CP009273/2881909‑2882201 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |