Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | CP009273 | 3,111,434 | C→A | 100% | A346A (GCG→GCT) | yghJ ← | DUF4092 family putative lipoprotein peptidase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009273 | 3,111,434 | 0 | C | A | 100.0% | 687.4 / NA | 206 | A346A (GCG→GCT) | yghJ | DUF4092 family putative lipoprotein peptidase |
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (118/88); total (118/88) | |||||||||||
Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Rejected as polymorphism: Variant not supported by required number of reads on each strand. |
Only 100 of 206 total aligned reads displayed.
CGTCGCACCGTTGGATAACGAGAGATTGATAATCTCGTTGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTCGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAATTCACCATTTTCCCCTGTCACGCCA > CP009273/3111290‑3111578 | cACCGTTGGATAACGAGAGATTGATAATCTCGTTGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCcgcg > 2:2744619/1‑148 (MQ=255) aCCGTTGGATAACGAGAGATTGATAATCTCGTTGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGa < 1:648911/148‑1 (MQ=255) ccGTTGGATAACGAGAGATTGATAATCTCGTTGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGaa > 1:3056165/1‑148 (MQ=255) ccGTTGGATAACGAGAGATTGATAATCTCGTTGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGaa < 1:1667833/148‑1 (MQ=255) cGTTGGATAACGAGAGATTGATAATCTCGTTGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAAc > 1:2658286/1‑148 (MQ=255) gTTGGATAACGAGAGATTGATAATCTCGTTGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACt < 1:2583404/148‑1 (MQ=255) ggATAACGAGAGATTGATAATCTCGTTGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTtca < 2:1553873/148‑1 (MQ=255) gATAACGAGAGATTGATAATCTCGTTGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTtcat < 2:1929393/148‑1 (MQ=255) gagagaTTGATAATCTCGTTGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCa > 1:1562313/1‑148 (MQ=255) agaTTGATAATCTCGTTGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGtt < 2:3174109/148‑1 (MQ=255) gaTTGATAATCTCGTTGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCAAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTtc > 1:2112516/1‑148 (MQ=255) ttGATAATCTCGTTGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTtcag > 1:1662799/1‑148 (MQ=255) ttGATAATCTCGTTGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTtcag < 2:2044182/148‑1 (MQ=255) aTAATCTCGTTGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTtcagtca > 1:1482398/1‑148 (MQ=255) aTAATCTCGTTGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTtcagtca > 2:2159392/1‑148 (MQ=255) tAATCTCGTTGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTtcagtcag < 2:1668865/148‑1 (MQ=255) aaTCTCGTTGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAgc > 1:567789/1‑148 (MQ=255) aTCTCGTTGATCACGTTGGGATATTCGGCAAAGACCTTTCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTAGAATAGCGATGAATAAGCTGATCAATATTAGCCCAGCGAACTTAATCACCCAGTTCAGTCAgcg > 1:2521425/1‑148 (MQ=255) aTCTCGTTGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAgcg > 2:2659814/1‑148 (MQ=255) tctcGTTGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAgcgc > 2:1349165/1‑148 (MQ=255) ctcGTTGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCa < 2:614779/148‑1 (MQ=255) ttGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATgg > 1:3431944/1‑148 (MQ=255) ttGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATgg > 1:2328289/1‑148 (MQ=255) ttGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATgg < 1:2401536/148‑1 (MQ=255) tGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGTACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGt > 2:2229450/1‑148 (MQ=255) tGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGt > 2:507922/1‑148 (MQ=255) aTCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCg > 1:1778423/1‑148 (MQ=255) aTCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCg > 1:1589027/1‑148 (MQ=255) cGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACtt > 1:1302983/1‑148 (MQ=255) ttGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTAt > 2:586458/1‑148 (MQ=255) tatTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCcgc > 2:353238/1‑148 (MQ=255) tCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAATCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCa < 2:1653076/148‑1 (MQ=255) tCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCa < 1:1148233/148‑1 (MQ=255) tCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCa < 1:1959033/148‑1 (MQ=255) tCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCa < 1:1148019/148‑1 (MQ=255) aGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAAcc > 2:2487673/1‑148 (MQ=255) gACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAAccc > 2:1363194/1‑148 (MQ=255) gACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAAccc < 2:2702576/148‑1 (MQ=255) cTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGt < 2:2182922/148‑1 (MQ=255) ttGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGtt > 1:1705059/1‑148 (MQ=255) ttGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGtt > 1:3470262/1‑148 (MQ=255) cGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCaa < 2:2257685/148‑1 (MQ=255) tACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAg < 2:1873228/148‑1 (MQ=255) aCATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAgg > 2:770722/1‑148 (MQ=255) aTCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTa < 2:880770/148‑1 (MQ=255) tCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTAt > 2:1103274/1‑148 (MQ=255) gTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCg < 2:1565082/148‑1 (MQ=255) gTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCg < 2:2358751/148‑1 (MQ=255) gTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCg > 1:2480941/1‑148 (MQ=255) ccGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGAt > 2:1492649/1‑148 (MQ=255) cGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATa > 2:818329/1‑148 (MQ=255) cGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATa < 1:2962299/148‑1 (MQ=255) gAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATAcc > 2:441083/1‑148 (MQ=255) gAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATAcc > 1:2893620/1‑148 (MQ=255) aacaacACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCa > 2:3285818/1‑148 (MQ=255) aacaCGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAg > 1:1839831/1‑148 (MQ=255) aacaCGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAg > 1:3168702/1‑148 (MQ=255) cGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGgaga < 2:2871867/148‑1 (MQ=255) gTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATgg < 1:2744619/148‑1 (MQ=255) tattatTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGt > 2:1744775/1‑148 (MQ=255) attattTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGtt > 1:1211148/1‑148 (MQ=255) attattTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGtt > 1:3099586/1‑148 (MQ=255) ttattTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGttt > 2:1409077/1‑148 (MQ=255) tattTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTc > 2:1577335/1‑148 (MQ=255) tattTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTc > 2:2709184/1‑148 (MQ=255) attTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCg < 2:1981807/148‑1 (MQ=255) ttttGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGc > 2:2080962/1‑148 (MQ=255) ttGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGccc < 1:2169685/148‑1 (MQ=255) ttGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGccc < 1:98972/148‑1 (MQ=255) tGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGcccc > 1:3403474/1‑148 (MQ=255) cccGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAg < 2:2856481/148‑1 (MQ=255) ggTCGTCGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTa > 2:251696/1‑148 (MQ=255) gtcgtcGAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTaa < 1:526194/148‑1 (MQ=255) tcgtcgAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTaaa > 2:3193131/1‑148 (MQ=255) tcgAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGa > 2:930820/1‑148 (MQ=255) cgAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGaa > 2:418573/1‑148 (MQ=255) gAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGaaa < 1:224736/148‑1 (MQ=255) gAATAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGaaa > 1:763827/1‑148 (MQ=255) aaTAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGaaaa < 2:1293669/148‑1 (MQ=255) aaTAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGaaaa < 1:2322379/148‑1 (MQ=255) aaTAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGaaaa < 2:34919/148‑1 (MQ=255) tAGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAAtt > 2:2935721/1‑148 (MQ=255) aGCGATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAATTc < 1:1342410/148‑1 (MQ=255) gATGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAATTCAcc < 2:3418515/148‑1 (MQ=255) aTGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAATTCACCa < 1:926653/148‑1 (MQ=255) aTGAATAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAATTCACCa < 1:441092/148‑1 (MQ=255) tAAGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAATTCACCATTTTc > 1:2724446/1‑148 (MQ=255) aaGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAATTCACCATTTTcc < 2:3437828/148‑1 (MQ=255) aGCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAATTCACCATTTTccc > 2:2295489/1‑148 (MQ=255) gCTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAATTCACCATTTTcccc < 1:1107245/148‑1 (MQ=255) cTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAATTCACCATTTTCCCCt > 1:3309326/1‑148 (MQ=255) cTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAATTCACCATTTTCCCCt < 2:1302983/148‑1 (MQ=255) cTGATCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAATTCACCATTTTCCCCt < 2:1791073/148‑1 (MQ=255) aTCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAATTCACCATTTTCCCCTGTc > 1:3315512/1‑148 (MQ=255) aTCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAATTCACCATTTTCCCCTGTc > 1:2953600/1‑148 (MQ=255) tCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAATTCACCATTTTCCCCTGTCa > 1:565037/1‑148 (MQ=255) tCAATATTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAATTCACCATTTTCCCCTGTCa > 1:854713/1‑148 (MQ=255) atatTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAATTCACCATTTTCCCCTGTCACGc > 1:282734/1‑148 (MQ=255) atTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAATTCACCATTTTCCCCTGTCACGCCa > 1:335824/1‑148 (MQ=255) atTAGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAATTCACCATTTTCCCCTGTCACGCCa < 2:1408943/148‑1 (MQ=255) | CGTCGCACCGTTGGATAACGAGAGATTGATAATCTCGTTGATCACGTTGGGATATTCGGCAAAGACCTTGCGTACATCGTCCGGAACAACACGGGTATTATTTTGCCCGGTCGTCGAATAGCGATGAATAAGCTGATCAATATTCGCCCCGCGAACTTCATCACCCAGTTCAGTCAGCGCAATGGTCGACTTATTGCCGCGCACTGAACCCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAATTCACCATTTTCCCCTGTCACGCCA > CP009273/3111290‑3111578 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |