| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,413,119 | G→T | 26.1% | pseudogene (654/960 nt) | yhdW → | pseudogene, amino‑acid transporter homology;putative transport; Not classified; putative periplasmic binding transport protein; periplasmic‑binding component of ABC superfamily |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,413,119 | 0 | G | T | 26.1% | 478.8 / 134.9 | 218 | pseudogene (654/960 nt) | yhdW | pseudogene, amino‑acid transporter homology;putative transport; Not classified; putative periplasmic binding transport protein; periplasmic‑binding component of ABC superfamily |
| Reads supporting (aligned to +/- strand): ref base G (78/83); new base T (36/21); total (114/104) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.48e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.40e-01 | |||||||||||
Only 100 of 219 total aligned reads displayed.
TGCGATACGCTGGCCTCGGATCAATCACAACTGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAG > CP009273/3412973‑3413266 | tGCGATACGCTGGCCTCGGATCAATCACAACTGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGa < 2:832877/148‑1 (MQ=255) gCGATACGCTGGCCTCGGATCAATCACAACTGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGAt < 1:1072418/148‑1 (MQ=255) cGATACGCTGGCCTCGGATCAATCACAACTGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGAtt > 1:400411/1‑148 (MQ=255) gATACGCTGGCCTCGGATCAATCACAACTGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTg > 1:3563726/1‑148 (MQ=255) aTACGCTGGCCTCGGATCAATCACAACTGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGt > 2:2143433/1‑148 (MQ=255) gCTGGCCTCGGATCAATCACAACTGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGc > 2:2195032/1‑148 (MQ=255) gCCTCGGATCAATCACAACTGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGa > 2:1502878/1‑148 (MQ=255) gCCTCGGATCAATCACAACTGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGa > 2:3142661/1‑148 (MQ=255) cGGATCAATCACAACTGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCt > 1:2605451/1‑148 (MQ=255) tcaatcaCAACTGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTc > 2:1044782/1‑148 (MQ=255) aatcaCAACTGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGc > 2:3093101/1‑148 (MQ=255) atcaCAACTGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGcc > 1:3092318/1‑148 (MQ=255) tcaCAACTGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCa > 1:3107740/1‑148 (MQ=255) acaACTGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCatg < 2:139871/148‑1 (MQ=255) acaACTGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCatg < 2:1198331/148‑1 (MQ=255) caACTGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCatgc < 1:1346806/148‑1 (MQ=255) tGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCatgctgaa > 1:644418/1‑148 (MQ=255) tGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCatgctgaa < 2:2600938/148‑1 (MQ=255) gTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCatgctgaat > 2:85761/1‑148 (MQ=255) gTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCatgctgaat > 1:841942/1‑148 (MQ=255) tATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCatgctgaatg < 1:898461/148‑1 (MQ=255) tGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCatgctgaatgct > 2:509693/1‑148 (MQ=255) cccTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCatgctgaatgctga > 1:14227/1‑148 (MQ=255) cccTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTAGCCatgctgaattctga > 1:14380/1‑148 (MQ=255) tGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAaga > 2:547059/1‑148 (MQ=255) cgcATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTNGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAgaga < 1:1808766/148‑1 (MQ=255) cgcATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAgaga < 1:1186995/148‑1 (MQ=255) tCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATggg > 2:1869510/1‑148 (MQ=255) tCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATggg > 2:2005242/1‑148 (MQ=255) tCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATggg > 1:1090861/1‑148 (MQ=255) tCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATggg > 2:2919069/1‑148 (MQ=255) tCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATggg > 2:450914/1‑148 (MQ=255) aaTTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCAt < 2:1000731/148‑1 (MQ=255) ttAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCa > 2:2208410/1‑148 (MQ=255) tAAGCAACCCAGCTGAATGGATTGTCTTACCTGAAGTTATCTCAAAATAACCGCTTTGTCCGGTAGTTCGTCGTGTCGATGATGAATTGTTCTCTATTGTACGCTGGACGCTTTTCTCCATGCTTAATGCTGAAGAGATGGGCATCaa > 2:189138/1‑148 (MQ=255) tAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCaa > 2:585867/1‑148 (MQ=255) aaGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAAt < 2:1886152/148‑1 (MQ=255) aGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAAtt > 1:217279/1‑148 (MQ=255) cAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTcc < 1:2304026/148‑1 (MQ=255) cAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTcc < 2:761861/148‑1 (MQ=255) cccAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAg > 2:3045166/1‑148 (MQ=255) ccAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGa > 1:878994/1‑148 (MQ=255) gCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACg > 1:2480909/1‑148 (MQ=255) gAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCg < 1:250220/148‑1 (MQ=255) gAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCg < 2:1547805/148‑1 (MQ=255) aaTGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGa > 2:1943551/1‑148 (MQ=255) aaTGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGa > 2:3022657/1‑148 (MQ=255) tGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATg > 2:2888217/1‑148 (MQ=255) ggATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGa > 1:3297341/1‑148 (MQ=255) ggATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGa < 2:1243443/148‑1 (MQ=255) gATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGaa > 2:3418920/1‑148 (MQ=255) gATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGaa > 1:2966689/1‑148 (MQ=255) tGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGaaaaa < 2:2457516/148‑1 (MQ=255) gTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCCGAACGTCGATGAAAAAg > 1:17338/1‑148 (MQ=255) tCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGc < 1:1854711/148‑1 (MQ=255) cTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCg > 1:158402/1‑148 (MQ=255) ccGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTa < 1:2283342/148‑1 (MQ=255) ccGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTa < 1:2195032/148‑1 (MQ=255) cGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAATCGGCTaa > 1:2827568/1‑148 (MQ=255) gAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATc < 1:1464788/148‑1 (MQ=255) gAAGTTATATCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGAAGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCAAGTTGAATGCTGAAGAGATGGCCCTCAAATCCCACAACGTCGATGAAAAAGCGGCTAAta > 2:3379533/1‑147 (MQ=255) aGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCa > 2:2287355/1‑148 (MQ=255) aGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCa < 1:2922675/148‑1 (MQ=255) ttATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCCGAACGTCGTTGAAATAGCGGCTAATCCAGc > 1:3398302/1‑148 (MQ=255) tATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCa < 2:1555689/148‑1 (MQ=255) tATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCa < 2:56427/148‑1 (MQ=255) aTCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCaa > 2:3482177/1‑148 (MQ=255) ctcAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACg > 2:2640551/1‑148 (MQ=255) tcAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGc < 2:721057/148‑1 (MQ=255) aaaaGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCt < 1:2207922/148‑1 (MQ=255) aaaGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTg > 2:1469282/1‑148 (MQ=255) aGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGat > 1:1385581/1‑148 (MQ=255) aGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGat > 1:2392345/1‑148 (MQ=255) aaCCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGatat > 2:2842162/1‑148 (MQ=255) aaCCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGatat < 2:2488657/148‑1 (MQ=255) aCCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATg > 2:3473102/1‑148 (MQ=255) ttGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGcaca > 1:2249653/1‑148 (MQ=255) tGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGGACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACAt < 2:725534/148‑1 (MQ=255) tCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATctg < 2:216753/148‑1 (MQ=255) gTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTgg < 2:2685925/148‑1 (MQ=255) gTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTgg < 2:18494/148‑1 (MQ=255) tAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTggg > 2:2583251/1‑148 (MQ=255) ttCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTaa < 1:2005242/148‑1 (MQ=255) cgtcgtGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAaag < 2:3203324/148‑1 (MQ=255) cgtcgtGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAaag < 2:3300502/148‑1 (MQ=255) cgtcgtGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAaag < 1:2160476/148‑1 (MQ=255) tcgtGGCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAaagaa < 1:547059/148‑1 (MQ=255) tcgtGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAaagaa < 2:3064383/148‑1 (MQ=255) tGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGc > 2:2185469/1‑148 (MQ=255) ggCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAAAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCg > 2:1642111/1‑148 (MQ=255) gCGATGATGAATGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGa < 1:585867/148‑1 (MQ=255) cGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGAt < 2:1435434/148‑1 (MQ=255) gatgatGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGAtt < 1:2951707/148‑1 (MQ=255) atgatgAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTa > 1:1920534/1‑148 (MQ=255) gaATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCa < 1:696985/148‑1 (MQ=255) aTGGTTCTCTATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAg > 1:1106954/1‑148 (MQ=255) aTGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAg > 1:818375/1‑148 (MQ=255) aTGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAg < 1:1215686/148‑1 (MQ=255) ttCTCGATTGTACGCTTGACTCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATc < 1:3344687/148‑1 (MQ=255) tctcGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCt > 1:2862218/1‑148 (MQ=255) | TGCGATACGCTGGCCTCGGATCAATCACAACTGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAG > CP009273/3412973‑3413266 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |