| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,466,427 | C→A | 7.3% | A149A (GCG→GCT) | fusA ← | protein chain elongation factor EF‑G, GTP‑binding |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,466,427 | 0 | C | A | 7.3% | 844.9 / 25.0 | 231 | A149A (GCG→GCT) | fusA | protein chain elongation factor EF‑G, GTP‑binding |
| Reads supporting (aligned to +/- strand): ref base C (109/105); new base A (9/8); total (118/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
Only 100 of 231 total aligned reads displayed.
TGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTACCGCACCATCGAGAACACGCATGGAACG > CP009273/3466281‑3466573 | tGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGGTTTGATCTGGTTAACAACTTTCAGGAAGTTCg > 1:1191924/1‑148 (MQ=255) gTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCa > 1:247976/1‑148 (MQ=255) gCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCAGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCa > 2:711104/1‑148 (MQ=255) gtcgtTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATg < 2:2871986/148‑1 (MQ=255) cgtTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCg < 2:918528/148‑1 (MQ=255) tCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTc > 2:2202158/1‑148 (MQ=255) ccAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTcc < 2:1968726/148‑1 (MQ=255) cAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCa > 1:2065526/1‑148 (MQ=255) gTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCAtt > 1:2964450/1‑148 (MQ=255) gTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCAtt < 2:3547337/148‑1 (MQ=255) ttGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCAttt < 2:2300810/148‑1 (MQ=255) aGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTa > 2:2506398/1‑148 (MQ=255) aGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTa > 2:2196366/1‑148 (MQ=255) aGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATGTTGTTa > 2:2679202/1‑148 (MQ=255) gCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTaa > 1:688097/1‑148 (MQ=255) tttCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTaacg > 1:1941611/1‑148 (MQ=255) ttCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGACGTTCGCACCCATGCGGTCCATTTTGTTaacga > 1:3415339/1‑148 (MQ=255) tCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTaacgaa > 2:938977/1‑148 (MQ=255) ttttCACCAGGTCAACCACACCGGTGAAATGTTCTTCAGCACAAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGCAAGTTCGCACCCATGCCGTCCATTTTGTTCACGAACGc > 2:3182227/1‑148 (MQ=255) tttCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCa < 2:1446147/148‑1 (MQ=255) cACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATg < 1:1702431/148‑1 (MQ=255) cACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATg < 2:192652/148‑1 (MQ=255) cAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATgcgc < 1:1966703/148‑1 (MQ=255) tCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGaa < 1:938977/148‑1 (MQ=255) aacaacACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACt < 1:904570/148‑1 (MQ=255) caacaCCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACttt > 1:979696/1‑148 (MQ=255) aacaCCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTta < 2:136125/148‑1 (MQ=255) acacCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTtat < 2:2763047/148‑1 (MQ=255) acacCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTtat > 2:2013656/1‑148 (MQ=255) acacCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTtat > 1:3521774/1‑148 (MQ=255) acacCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTtat < 2:358487/148‑1 (MQ=255) cacCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTtata < 1:847363/148‑1 (MQ=255) cacCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTtata > 2:885361/1‑148 (MQ=255) gTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATAtttgt < 1:3256702/148‑1 (MQ=255) tGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATAtttgtt < 2:539863/148‑1 (MQ=255) tGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTAGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATAtttgtt < 1:2835279/148‑1 (MQ=255) tGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTAGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATAtttgtt < 1:1847709/148‑1 (MQ=255) tGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTAGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATAtttgtt < 1:1052867/148‑1 (MQ=255) gAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATAtttgttt < 2:393698/148‑1 (MQ=255) aaTGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTAGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGc > 1:1332069/1‑148 (MQ=255) gTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTg < 1:653718/148‑1 (MQ=255) gTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTg > 1:3399148/1‑148 (MQ=255) ttcttcAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTAGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGa < 2:3304827/148‑1 (MQ=255) aGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCAt > 1:2986094/1‑148 (MQ=255) gCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATa < 1:857751/148‑1 (MQ=255) gCACCAAGCGCCCGCTGCAGCGGCACCGGGGGCGCGCCCAGACGGGGTTTGATCTGGTGAACAACTGTCCGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTGGCCTGACGCCATa < 2:3474602/148‑1 (MQ=255) ccAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACgg < 1:1107711/148‑1 (MQ=255) ccAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACgg < 1:2886053/148‑1 (MQ=255) aTCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGttt > 1:1272512/1‑148 (MQ=255) aTCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGttt < 1:2203714/148‑1 (MQ=255) aTCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTATCAGGAAGTTAGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGttt > 2:1238077/1‑148 (MQ=255) tCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTc > 2:2286480/1‑148 (MQ=255) ccAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGa < 2:452964/148‑1 (MQ=255) ccAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGa < 2:1732344/148‑1 (MQ=255) aGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACt > 1:3332197/1‑148 (MQ=255) gCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTg < 1:259045/148‑1 (MQ=255) cTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGc < 2:471239/148‑1 (MQ=255) tGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCg < 1:2972361/148‑1 (MQ=255) tGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCg < 2:1763594/148‑1 (MQ=255) tGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCg < 1:485292/148‑1 (MQ=255) gCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCgg > 1:2741978/1‑148 (MQ=255) aGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCt < 1:916782/148‑1 (MQ=255) ggTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACaccacc > 1:2510068/1‑148 (MQ=255) ggTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACaccacc > 1:2510861/1‑148 (MQ=255) ttCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCaa < 2:1061880/148‑1 (MQ=255) tCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAAc < 2:2402389/148‑1 (MQ=255) cgcgCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACt > 2:2039763/1‑148 (MQ=255) aCGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTaa > 1:1532520/1‑148 (MQ=255) cGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTaaa > 2:520389/1‑148 (MQ=255) gggTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAAc > 2:430050/1‑148 (MQ=255) ggTTTTGATCTGGTTAACAACTTTCAGGAAGTTAGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAAcc > 1:579787/1‑148 (MQ=255) gTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCa < 1:1343100/148‑1 (MQ=255) gTTTTGATCTGGTTAACAACTTTCAGGAAGTTAGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCa > 1:2318546/1‑148 (MQ=255) ttttGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCAt > 2:1302824/1‑148 (MQ=255) tttGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCAtt > 2:2732228/1‑148 (MQ=255) tttGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCAtt > 2:3275605/1‑148 (MQ=255) tttGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCAtt < 2:1191924/148‑1 (MQ=255) tttaTCTGGTTAACATCTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGATCGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTa < 2:1247596/145‑1 (MQ=255) ttGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTa < 2:247989/148‑1 (MQ=255) ggTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTACCGCAcc < 2:587808/148‑1 (MQ=255) ttAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTACCGCACCAt > 1:64859/1‑148 (MQ=255) ttAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTACCGCACCAt > 1:241017/1‑148 (MQ=255) ttAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTACCGCACCAt > 1:238520/1‑148 (MQ=255) ttAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTACCGCACCAt > 1:3056022/1‑148 (MQ=255) ttAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAAACATAACCGCACCAt > 2:2583102/1‑148 (MQ=255) tAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTACCGCACCATc > 2:3166789/1‑148 (MQ=255) tAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTACCGCACCATc < 2:1932346/148‑1 (MQ=255) tAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTACCGCACCATc > 2:1568922/1‑148 (MQ=255) aacaacTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTACCGCACCATCg < 2:1918851/148‑1 (MQ=255) cTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTACCGCACCATCGAGAac > 2:3268908/1‑148 (MQ=255) cAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTACCGCACCATCGAGAACACGc < 1:711104/148‑1 (MQ=255) aGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTACCGCACCATCGAGAACACGCa < 2:1566484/148‑1 (MQ=255) ggAAGTTAGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTACCGCACCATCGAGAACACGCAt > 2:66340/1‑148 (MQ=255) gAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGCACGTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCAGTACCGCACCATCGAGAACACGCATg > 1:2150188/1‑148 (MQ=255) gAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTACCGCACCATCGAGAACACGCATg > 2:2363163/1‑148 (MQ=255) gTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTACCGCACCATCGAGAACACGCATGGaa > 2:611604/1‑148 (MQ=255) gTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTACCGCACCATCGAGAACACGCATGGaa > 1:1410055/1‑148 (MQ=255) tCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTACCGCACCATCGAGAACACGCATGGAACg > 1:2223198/1‑148 (MQ=255) tCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTACCGCACCATCGAGAACACGCATGGAACg > 2:2483967/1‑148 (MQ=255) tCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTACCGCACCATCGAGAACACGCATGGAACg > 1:463670/1‑148 (MQ=255) | TGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGACTGCGGCTGAACACCACCAACTGCGCAGTAAACCATTACCGCACCATCGAGAACACGCATGGAACG > CP009273/3466281‑3466573 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |