| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,526,702:1 | +C | 7.7% | coding (526/1623 nt) | pck → | phosphoenolpyruvate carboxykinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,526,702 | 1 | . | C | 7.7% | 1536.2 / 140.7 | 336 | coding (526/1623 nt) | pck | phosphoenolpyruvate carboxykinase |
| Reads supporting (aligned to +/- strand): ref base . (152/158); new base C (20/6); total (172/164) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.32e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.31e-01 | |||||||||||
Only 100 of 344 total aligned reads displayed.
GTGCGAACCCGGATACTCGTCTTTCCGTCCGTTTCATCACCGAAGTGGCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTTCTCGATGATGAACTACCTGCTGCCGCTG > CP009273/3526553‑3526851 | gtgCGAACCCGGATACTCGTCTTTCCGTCCGTTTCATCACCGAAGTGGCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCa < 2:3331952/150‑1 (MQ=255)gtgCGAACCCGGATACTCGTCTTTCCGTCCGTTTCATCACCGAAGTGGCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCa < 2:1261633/150‑1 (MQ=255) tgCGAACCCGGATACTCGTCTTTCCGTCCGTTTCATCACCGAAGTGGCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑c < 1:908182/150‑1 (MQ=255) gAACCCGGATACTCGTCTTTCCGTCCGTTTCATCACCGAAGTGGCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑ccta < 1:3998340/150‑4 (MQ=255) aCCCGGATACTCGTCTTTCCGTCCGTTTCATCACCGAAGTGGCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAAcc > 2:5433762/1‑150 (MQ=255) cccGGATACTCGTCTTTCCGTCCGTTTCATCACCGAAGTGGCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAAccc < 1:2093255/150‑1 (MQ=255) gATACTCGTCTTTCCGTCCGTTTCATCACCGAAGTGGCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAg > 1:184011/1‑150 (MQ=255) tACTCGTCTTTCCGTCCGTTTCATCACCGAAGTGGCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTg > 1:3040203/1‑150 (MQ=255) aCTCGTCTTTCCGTCCGTTTCATCACCGAAGTGGCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTgg < 1:2505756/150‑1 (MQ=255) tttCCGTCCGTTTCATCACCGAAGTGGCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAAc < 2:4733663/150‑1 (MQ=255) ttacgtccgtTTCATCACCGAAGTGGCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACa > 2:828384/4‑150 (MQ=255) gtccgtTTCATCACCGAAGTGGCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGt > 1:4423475/1‑150 (MQ=255) tccgtTTCATCACCGAAGTGGCCTGGTAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGtc < 1:1704739/150‑1 (MQ=255) ccgtTTCATCACCGAAGTGGCCTGGCATGCGCATTTTGTCAACAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGtct < 2:2107238/150‑1 (MQ=255) cgtTTCATCACCGAAGTGGCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGtctc > 1:5247658/1‑150 (MQ=255) ttCATCACCGAAGTGGCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAAc < 1:3675450/150‑1 (MQ=255) catcaCCGAAGTGGCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTc > 2:4813212/1‑150 (MQ=255) caCCGAAGTGGCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGa > 2:2222704/1‑150 (MQ=255) gAAGTGGCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAAc > 1:4857306/1‑150 (MQ=255) aGTGGCCTGGCCGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGAA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACtt < 2:5143542/150‑1 (MQ=255) ggCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGt > 1:1661045/1‑150 (MQ=255) ggCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGt < 2:29637/150‑1 (MQ=255) cTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGc < 1:1264053/150‑1 (MQ=255) tgtcAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCg > 1:2704657/4‑150 (MQ=255) tGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCACCTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGc > 2:4095924/1‑150 (MQ=255) tGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCACCTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGc > 2:765426/1‑150 (MQ=255) tGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCg > 2:5309839/1‑150 (MQ=255) cAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGttt > 2:1789135/1‑150 (MQ=255) cAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGttt > 2:4332008/1‑150 (MQ=255) cAGGCGCATTTTGTCAAAAACATGTTTAGTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGttt < 1:5223475/150‑1 (MQ=255) aGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTa < 2:2889961/150‑1 (MQ=255) ggCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTaa > 1:4168035/1‑150 (MQ=255) gcgcATTTTGTCAACAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAAc < 2:2682881/150‑1 (MQ=255) cgcATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCACCTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAAc > 2:238356/1‑150 (MQ=255) cgcATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAAcc < 1:933554/150‑1 (MQ=255) gcATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCt < 2:1038387/150‑1 (MQ=255) ttttGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGAc > 1:2058338/1‑150 (MQ=255) ttttGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGAc > 1:1708946/1‑150 (MQ=255) ttttGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGAc < 1:160478/150‑1 (MQ=255) tGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGa < 1:5352880/150‑1 (MQ=255) tCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAgc > 2:4187891/1‑150 (MQ=255) aaaaaCATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAgcgc > 1:1014829/1‑150 (MQ=255) aaaaaCATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAgcgc > 1:2354902/1‑150 (MQ=255) aaaaCATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCa > 2:5164296/1‑150 (MQ=255) aTGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCATACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAg < 1:2747179/150‑1 (MQ=255) aTGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAg > 2:4769065/1‑150 (MQ=255) aTGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAg > 2:3073514/1‑150 (MQ=255) aTGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAg < 1:2982564/150‑1 (MQ=255) tATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCACCTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGa > 2:1443933/1‑150 (MQ=255) aTTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGAtt > 2:3995666/1‑150 (MQ=255) ttCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTg < 1:2843303/150‑1 (MQ=255) ttCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTg < 1:454541/150‑1 (MQ=255) tCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTgg < 1:3894927/150‑1 (MQ=255) gCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTggcg > 1:3307013/1‑150 (MQ=255) cccGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTggcgg > 1:2267249/1‑150 (MQ=255) ccGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTggcggc > 1:4024554/1‑150 (MQ=255) ccGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTggcggc > 2:3771845/1‑150 (MQ=255) cGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTg < 1:3739849/150‑1 (MQ=255) gATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTgg < 2:1602126/150‑1 (MQ=255) gATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTgg > 1:1997092/1‑150 (MQ=255) aTGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGt < 1:973354/150‑1 (MQ=255) gaagaaCTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTAc > 2:2773023/1‑150 (MQ=255) gaagaaCTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTAc < 1:1460474/150‑1 (MQ=255) gaaCTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTAcggc > 1:1851086/1‑150 (MQ=255) aaCTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTAcggcg < 1:1094013/150‑1 (MQ=255) aCTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTAcggcgg > 2:5366794/1‑150 (MQ=255) gCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGaa > 2:4598319/1‑150 (MQ=255) gCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGaa < 2:445390/150‑1 (MQ=255) aGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAAt < 1:3062320/150‑1 (MQ=255) gTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTCCGGCGGCGACATga > 1:2408044/1‑150 (MQ=255) aaaCCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGaaa < 1:132904/150‑1 (MQ=255) aaaCCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGaaa > 1:1398057/1‑150 (MQ=255) aaaCCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGaaa < 1:1894115/150‑1 (MQ=255) aaaCCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGaaa > 1:5311221/1‑150 (MQ=255) aaaCCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGaaa < 2:3230143/150‑1 (MQ=255) ccAGACTTTATCGTTATGAACGGCGCGAAGTGCACCTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAgg > 2:3830792/1‑150 (MQ=255) ccAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAggg > 1:4957197/1‑150 (MQ=255) cAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGa < 2:42360/150‑1 (MQ=255) cAGACTTTAACGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGa < 2:5060824/150‑1 (MQ=255) gACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATg < 1:5433762/150‑1 (MQ=255) cTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGtt > 1:617421/1‑150 (MQ=255) tttCTCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTtc < 1:4648528/150‑1 (MQ=255) tttATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTtc < 2:3667738/150‑1 (MQ=255) tATCGTTATGAACGGCGCGAAGTGCACCTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTtct < 1:765426/150‑1 (MQ=255) tATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTtctc < 2:4887264/150‑1 (MQ=255) cGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTTCTCgat > 2:1972215/1‑150 (MQ=255) ttATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTTCTCgatga > 1:5120296/1‑150 (MQ=255) tATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTTCTCgatgat > 1:2774785/1‑150 (MQ=255) gAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTTCTCGATGATGaa < 2:4119734/150‑1 (MQ=255) aaCGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTTCTCGATGATGAAc < 1:5167815/150‑1 (MQ=255) aaCGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTTCTCGATGATGAAc < 2:2489546/150‑1 (MQ=255) ggCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTTCTCGATGATGAACTAc > 1:4369/1‑150 (MQ=255) cgcgAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTTCTCGATGATGAACTACct > 1:3976967/1‑150 (MQ=255) cgcgAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTTCTCGATGATGAACTACct < 1:3688774/150‑1 (MQ=255) cgcgAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTTCTCGATGATGAACTACct > 2:1682343/1‑150 (MQ=255) gTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTTCTCGATGATGAACTACCTGCTGcc < 2:5017019/150‑1 (MQ=255) gTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTTCTCGATGATGAACTACCTGCTGcc < 2:2999389/150‑1 (MQ=255) cA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTTCTCGATGATGAACTACCTGCTGCCGCt < 1:4149766/150‑1 (MQ=255) cA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTTCTCGATGATGAACTACCTGCTGCCGCt < 1:5027349/150‑1 (MQ=255) a‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTTCTCGATGATGAACTACCTGCTGCCGCTg > 2:623002/1‑150 (MQ=255) | GTGCGAACCCGGATACTCGTCTTTCCGTCCGTTTCATCACCGAAGTGGCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCA‑CTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTTCTCGATGATGAACTACCTGCTGCCGCTG > CP009273/3526553‑3526851 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |