| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,671,771 | T→A | 5.0% | intergenic (‑61/+9) | yhjG ← / ← yhjH | putative inner membrane‑anchored periplasmic AsmA family protein/cyclic‑di‑GMP phosphodiesterase, FlhDC‑regulated |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,671,771 | 0 | T | A | 5.0% | 1192.5 / 36.9 | 316 | intergenic (‑61/+9) | yhjG/yhjH | putative inner membrane‑anchored periplasmic AsmA family protein/cyclic‑di‑GMP phosphodiesterase, FlhDC‑regulated |
| Reads supporting (aligned to +/- strand): ref base T (154/145); new base A (9/7); total (164/152) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 319 total aligned reads displayed.
TCAAAAGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGTTTCTACGCCCTCGACAATCACCCCGCG > CP009273/3671622‑3671920 | aaaaGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGa > 2:1036031/1‑150 (MQ=255) ttGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAg < 2:253381/150‑1 (MQ=255) tGCACTCAACCTGATCGCCACGACACTCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTGGCTCATCGTTCGCTTCCTCATAGTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGc < 2:1630797/150‑1 (MQ=255) tGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGc < 2:5354960/150‑1 (MQ=255) gCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCt > 1:3440840/1‑150 (MQ=255) aTCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTtat < 1:5208876/150‑1 (MQ=255) aTCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTtat > 2:3680541/1‑150 (MQ=255) cAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAg > 1:774281/1‑150 (MQ=255) cAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAg < 2:340255/150‑1 (MQ=255) cAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAg < 2:4026638/150‑1 (MQ=255) aaaaTGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAgc < 1:3874087/150‑1 (MQ=255) aaaTGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAgcg < 1:1597086/150‑1 (MQ=255) aaaTGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAgcg < 1:4325971/150‑1 (MQ=255) tGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCCTCGTTCGCTTCCTCATATTCTTCCTGGGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCa < 2:3030521/150‑1 (MQ=255) tGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCa > 1:970042/1‑150 (MQ=255) tGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCa < 2:361132/150‑1 (MQ=255) tGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAAAGAGGCAGCTTATAGCGCCa < 2:3867423/150‑1 (MQ=255) aTCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGa > 2:1789187/1‑150 (MQ=255) gCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAAAGAGGCAGCTTATAGCGCCAGAAcc < 2:4384283/150‑1 (MQ=255) aCGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAAccgcc < 1:1417105/150‑1 (MQ=255) gACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGt > 1:4385010/1‑150 (MQ=255) cAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTAt > 2:1489569/1‑150 (MQ=255) aaTCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTAtt < 1:631400/150‑1 (MQ=255) aaTCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTAtn < 2:4045375/150‑2 (MQ=255) tCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCa < 2:5143474/150‑1 (MQ=255) caacaacaaGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAg > 1:3331557/1‑150 (MQ=255) caacaacaaGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAg > 1:1332931/1‑150 (MQ=255) aacaacaaGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGc > 1:5038763/1‑150 (MQ=255) aacaacaaGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGc > 1:2300536/1‑150 (MQ=255) aacaacaaGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGc > 2:1946044/1‑150 (MQ=255) caacaaGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGt < 2:876420/150‑1 (MQ=255) aaGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCt < 1:5236205/150‑1 (MQ=255) aaGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCAGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAAGGAGGCAGCTTAGAGCGCCAGAACCGCCCTATACAGCGTTTCt > 2:4971898/1‑150 (MQ=255) aGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTa > 1:2886041/1‑150 (MQ=255) aGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTa > 1:2251880/1‑150 (MQ=255) aaaGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAATTGAGGCAGCTTCTAGCGCCAGACCCGCCGTATGCTGCGTGtctctc > 2:2946880/1‑150 (MQ=255) aaaGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATc < 1:3300262/150‑1 (MQ=255) aGCCCCTGAAATCGCAGCGGTTATTTTGACTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCACTACCGCCGTAATCAGCGATTCTATCgg > 2:3691953/1‑150 (MQ=255) gCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGt > 1:1750309/1‑150 (MQ=255) ccTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGcc < 1:3823644/150‑1 (MQ=255) aTCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAAAGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGt > 1:3386429/1‑150 (MQ=255) gCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAAAGAGGCAGCTTATCGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTgaaaga > 2:3152510/1‑150 (MQ=255) cGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTgaaagaa < 1:4639507/150‑1 (MQ=255) gTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAAc < 2:1341972/150‑1 (MQ=255) ttATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAAcc > 2:836934/1‑150 (MQ=255) tATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAAAGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCa > 2:484861/1‑150 (MQ=255) aTTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAg < 2:2666777/150‑1 (MQ=255) tgcctgccTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCtt < 2:1451980/150‑1 (MQ=255) gcctgcctTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTtg > 1:1527235/1‑150 (MQ=255) ctgcctTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTtgtg < 2:1235034/150‑1 (MQ=255) tgcctTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTgc > 2:904135/1‑150 (MQ=255) tgcctTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTgc > 2:5418945/1‑150 (MQ=255) ctTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGATGCAGCTGATAGCGCCAGAACCGCCGAATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGACACCAGCCTTGTgcggc > 1:195453/1‑150 (MQ=255) ttGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTgcggcg < 2:4534409/150‑1 (MQ=255) tGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGa > 2:1606312/1‑150 (MQ=255) cGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCggg > 1:842343/1‑150 (MQ=255) tCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGa > 2:1117382/1‑150 (MQ=255) cGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAg < 1:4267925/150‑1 (MQ=255) cGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAg > 1:3139538/1‑150 (MQ=255) cGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAg > 1:739668/1‑150 (MQ=255) cGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAAAGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAg < 1:2937285/150‑1 (MQ=255) cTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGtt > 2:3994779/1‑150 (MQ=255) tCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAACCCAGCCTTGTGCGGCGAATGCGGGCGAGTTCt > 2:5099678/1‑150 (MQ=255) tCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCt > 2:2383732/1‑150 (MQ=255) tCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCt < 1:1086388/150‑1 (MQ=255) cTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGa < 2:726535/150‑1 (MQ=255) cTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGa < 2:3468613/150‑1 (MQ=255) atTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATc > 1:3525687/1‑150 (MQ=255) tcttcCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCAc < 1:2364433/150‑1 (MQ=255) cttcCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACg < 2:4349020/150‑1 (MQ=255) tgCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAAAGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCActct > 2:3306291/1‑150 (MQ=255) gCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCtt > 2:2011324/1‑150 (MQ=255) gCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCtt > 2:1867149/1‑150 (MQ=255) gCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCtt > 2:1571199/1‑150 (MQ=255) cAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTcc < 2:706946/150‑1 (MQ=255) cAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTcc < 1:2831748/150‑1 (MQ=255) ccTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCg < 1:2529835/150‑1 (MQ=255) cTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGt > 1:1013832/1‑150 (MQ=255) tAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGtt < 2:2479489/150‑1 (MQ=255) aaaGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGttt > 1:180331/1‑150 (MQ=255) aGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGTTTCt > 1:17258/1‑150 (MQ=255) aTAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGTTTCTAc > 1:3733024/1‑150 (MQ=255) tAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGTTTCTACg > 1:484950/1‑150 (MQ=255) gTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGTTTCTACGcc > 2:1910116/1‑150 (MQ=255) tCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGTTTCTACGccc > 1:2183488/1‑150 (MQ=255) tCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGTTTCTACGccc > 1:1854149/1‑150 (MQ=255) cagccagGCGGAAAATGAGGCAGCTTATAGCGCCAGACCCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGTTTCTACGCCCTc < 2:2387671/150‑1 (MQ=255) cagccagGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGTTTCTACGCCCTc < 1:3762575/150‑1 (MQ=255) cagccagGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGTTTCTACGCCCTc < 2:2010498/150‑1 (MQ=255) ccagGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGTTTCTACGCCCTCGAc < 1:586139/150‑1 (MQ=255) ggAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGTTTCTACGCCCTCGACAATCAc > 2:4602519/1‑150 (MQ=255) ggAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGTTTCTACGCCCTCGACAATCAc > 1:4130288/1‑150 (MQ=255) ggAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGTTTCTACGCCCTCGACAATCAc > 2:1730554/1‑150 (MQ=255) aaaaTGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGTTTCTACGCCCTCGACAATCAccc < 1:3932999/150‑1 (MQ=255) aaaTGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGTTTCTACGCCCTCGACAATCAcccc < 1:2660674/150‑1 (MQ=255) aaaTGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGTTTCTACGCCCTCGACAATCAcccc < 1:5368188/150‑1 (MQ=255) aaaTGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGTTTCTACGCCCTCGACAATCAcccc < 2:2200784/150‑1 (MQ=255) aaaTGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGTTTCTACGCCCTCGACAATCAcccc > 1:124898/1‑150 (MQ=255) aaaTGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGTTTCTACGCCCTCGACAATCAcccc < 2:1147834/150‑1 (MQ=255) aTGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGTTTCTACGCCCTCGACAATCACCCcgc < 1:2441103/150‑1 (MQ=255) | TCAAAAGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAGCGTTTCTATCGGTGCCGGGCGTGAAAGAAACCAGCCTTGTGCGGCGAATGCGGGCGAGTTCTGAACATCACGCCACTCTTCCGGCGTTTCTACGCCCTCGACAATCACCCCGCG > CP009273/3671622‑3671920 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |