| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,367,995 | G→A | 6.6% | P256L (CCC→CTC) | ampC ← | penicillin‑binding protein; beta‑lactamase, intrinsically weak |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,367,995 | 0 | G | A | 6.6% | 1167.9 / 47.8 | 332 | P256L (CCC→CTC) | ampC | penicillin‑binding protein; beta‑lactamase, intrinsically weak |
| Reads supporting (aligned to +/- strand): ref base G (150/160); new base A (13/9); total (163/169) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 341 total aligned reads displayed.
TATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCGTAATTCTTTTCTTCTGCGGGCGGTACA > CP009273/4367846‑4368144 | tATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAggg > 2:1028183/1‑150 (MQ=255)tATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAggg < 1:3164306/150‑1 (MQ=255) ttGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGt < 1:2336909/150‑1 (MQ=255) ttGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGt < 1:1973664/150‑1 (MQ=255) tGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGtt < 2:5407527/150‑1 (MQ=255) gTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGttt > 1:3325230/1‑150 (MQ=255) gTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGGTTGCTCAGTGATATCAAgggggtg > 2:3846256/1‑147 (MQ=255) cACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTa < 2:1686213/150‑1 (MQ=255) aCTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTaa > 2:5266059/1‑150 (MQ=255) tGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAAt < 1:210816/150‑1 (MQ=255) tGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAAt < 1:4330834/150‑1 (MQ=255) gCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAAtt < 1:1022658/150‑1 (MQ=255) gCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAAtt < 2:1763358/150‑1 (MQ=255) atgatgCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGc > 2:135970/1‑150 (MQ=255) atgatgCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGc < 1:3209546/150‑1 (MQ=255) atgatgCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGAGTTTTAAATTGCTTTGc > 1:3956911/1‑150 (MQ=255) atgCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCAcc > 1:3082702/1‑150 (MQ=255) tGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGc > 1:1186461/1‑150 (MQ=255) gTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCg < 2:5058588/150‑1 (MQ=255) tCAGGATTTACCGGCCAGTCCAGCATCTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCgg < 1:3723676/150‑1 (MQ=255) cAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCggg > 1:4800356/1‑150 (MQ=255) aGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGc > 2:4735813/1‑150 (MQ=255) aTTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCat < 2:4249812/150‑1 (MQ=255) aTTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCat > 1:2548152/1‑150 (MQ=255) tttACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCata < 1:2812689/150‑1 (MQ=255) cAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATg < 1:3979554/150‑1 (MQ=255) ccAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCg > 2:1868440/1‑150 (MQ=255) cAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGAGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGa < 2:2024576/150‑1 (MQ=255) cATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGAAGCGAGAAAGTGCCAGATGTATCCCTTGTTGAAGCGTTTTCTCATTGTTATCAAGGAGTTTTAAATTGCTTTGCACACAGCGGGCCATATCTTCAATTGTCGACtt > 2:4651833/1‑150 (MQ=255) ccagcccagGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACAcc < 1:5251536/150‑1 (MQ=255) ccagcccagGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACAcc > 2:1950702/1‑150 (MQ=255) cccagGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATaa < 2:4406101/150‑1 (MQ=255) cccagGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATaa > 1:3535398/1‑150 (MQ=255) ccagGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAg > 1:1852115/1‑150 (MQ=255) cATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTaa < 1:1465352/150‑1 (MQ=255) atatCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAAc < 1:2180366/150‑1 (MQ=255) tatCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACg < 2:5120778/150‑1 (MQ=255) tCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGcc < 2:2067026/150‑1 (MQ=255) ccGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCa > 2:5339770/1‑150 (MQ=255) cGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAg < 2:3138023/150‑1 (MQ=255) tttGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCg < 1:682925/150‑1 (MQ=255) ttGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGa < 2:1843161/150‑1 (MQ=255) tGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGaa > 1:4772263/1‑150 (MQ=255) tGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCAGTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGaa > 2:2770588/1‑150 (MQ=255) cAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACa < 1:1631206/150‑1 (MQ=255) gTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATg > 1:2156744/1‑150 (MQ=255) tAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGAGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGc > 1:5359186/1‑150 (MQ=255) aGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCa < 1:1826296/150‑1 (MQ=255) cGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACt < 1:2601989/150‑1 (MQ=255) gagaTTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATTCACTg > 2:776417/1‑150 (MQ=255) gagaTTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTg > 1:2247452/1‑150 (MQ=255) gagaTTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTg > 2:3051793/1‑150 (MQ=255) agaTTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATCGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGc > 1:1771693/1‑150 (MQ=255) aTTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCt < 1:4823592/150‑1 (MQ=255) ttGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCtt < 1:822652/150‑1 (MQ=255) tgtgCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTa < 2:2957440/150‑1 (MQ=255) tgtgCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTa < 1:86040/150‑1 (MQ=255) tgtgCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTa < 1:5106174/150‑1 (MQ=255) gtgCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTAc < 2:2741719/150‑1 (MQ=255) tgCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTAcc > 2:1458323/1‑150 (MQ=255) ccAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCtt > 1:5173707/1‑150 (MQ=255) cAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTc < 1:884686/150‑1 (MQ=255) gTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGat > 1:1318974/1‑150 (MQ=255) gTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGat > 2:2239462/1‑150 (MQ=255) gTATCCCTTGTTGAAGCGTATTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGat < 2:4062120/150‑1 (MQ=255) aTCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGatat > 2:1564544/1‑150 (MQ=255) aTCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGatat < 2:3718014/150‑1 (MQ=255) tCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATc < 1:5322407/150‑1 (MQ=255) cccTTGTTTAAGCGTTTTCTCATTGATATCAAGTGGTTTTAAATTGCATAGCACACAGCGGGCCATATCTTCAATGGACGACATCACACCATAAGCTTCAGCAACTAACGCCCCAGGCGAAAAATGAAATGCCATAACTTCGCGatatac > 2:4467421/1‑148 (MQ=255) cccTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATcc < 2:1186461/150‑1 (MQ=255) cTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATcccc < 2:952025/150‑1 (MQ=255) ttgttgAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCa < 2:26066/150‑1 (MQ=255) ttgttgAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCa < 1:4053906/150‑1 (MQ=255) ttgttgAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCa < 1:337881/150‑1 (MQ=255) ttgttgAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCa < 2:3560787/150‑1 (MQ=255) tgttgAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAg < 1:5261304/150‑1 (MQ=255) tgttgAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAg < 1:1364972/150‑1 (MQ=255) tgAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCg > 1:932836/1‑150 (MQ=255) gAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCGt < 1:3886870/150‑1 (MQ=255) aaGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCgaa > 2:4594722/1‑148 (MQ=255) aGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCGTaa > 2:4826116/1‑150 (MQ=255) aGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCGTaa > 1:2215307/1‑150 (MQ=255) cGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCAATGCCTTACCTTCGCGATATCCCCAGGCGTAAtt > 1:4568070/1‑150 (MQ=255) gTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCGTAAttc < 1:4510372/150‑1 (MQ=255) gTTTTCTCATTGATATCAAGGAGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCGTAAttc < 2:588568/150‑1 (MQ=255) tttCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCGTAAttctt > 1:1121695/1‑150 (MQ=255) tttCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCGTAAttctt > 1:2193079/1‑150 (MQ=255) ctcATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCGTAAttcttttc > 2:3902067/1‑150 (MQ=255) tcATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCGTAAttcttttct > 2:4765392/1‑150 (MQ=255) cATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCGTAAttcttttctt < 2:3363024/150‑1 (MQ=255) ttGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCGTAATTCTTTtcttct < 2:1254609/150‑1 (MQ=255) ttGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCGTAATTCTTTtcttct < 1:3422065/150‑1 (MQ=255) tatCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCGTAATTCTTTTCTTCTgcgg > 2:1055250/1‑150 (MQ=255) atCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCGTAATTCTTTTCTTCTgcggg > 1:1096679/1‑150 (MQ=255) atCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCGTAATTCTTTTCTTCTgcggg > 2:1113658/1‑150 (MQ=255) tCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCGTAATTCTTTTCTTCTgagggc > 2:2326537/1‑150 (MQ=255) cAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCGTAATTCTTTTCTTCTgcgggcg < 2:5154121/150‑1 (MQ=255) cAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCGTAATTCTTTTCTTCTgcgggcg > 2:547743/1‑150 (MQ=255) cAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCGTAATTCTTTTCTTCTgcgggcg > 2:2147308/1‑150 (MQ=255) cAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCGTAATTCTTTTCTTCTgcgggcg < 2:2446338/150‑1 (MQ=255) | TATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAGCGAGATTGTGCCAGTTGTATCCCTTGTTGAAGCGTTTTCTCATTGATATCAAGGGGTTTTAAATTGCTTTGCACCCAGCGGGCCATATCTTCAATGGTCGACTTCACACCATAAGCTTCAGCATCTAACGCCCCAGGCGAAACATGCACTGCCTTACCTTCGCGATATCCCCAGGCGTAATTCTTTTCTTCTGCGGGCGGTACA > CP009273/4367846‑4368144 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |