| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,289,247 | G→A | 100% | intergenic (‑64/+134) | fdhF ← / ← mdtP | formate dehydrogenase‑H, selenopolypeptide subunit/outer membrane factor of efflux pump |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,289,247 | 0 | G | A | 95.2% | 602.8 / 16.7 | 189 | intergenic (‑64/+134) | fdhF/mdtP | formate dehydrogenase‑H, selenopolypeptide subunit/outer membrane factor of efflux pump |
| Reads supporting (aligned to +/- strand): ref base G (6/3); new base A (73/107); total (79/110) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.38e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 190 total aligned reads displayed.
GGACGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCACGCGGCAGACATTTTATTTTTT > CP009273/4289102‑4289389 | ggACGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGcc > 2:574737/1‑148 (MQ=255) aCGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACcac > 1:2355084/1‑148 (MQ=255) aCGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACcac < 2:2850803/148‑1 (MQ=255) gATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACAt < 2:2531126/148‑1 (MQ=255) gATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACAt < 1:3233687/148‑1 (MQ=255) aTTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACAtt > 2:3400429/1‑148 (MQ=255) aTTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACAtt > 2:1662143/1‑148 (MQ=255) ttttGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACAttt > 1:1100611/1‑148 (MQ=255) ttttGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACAttt > 1:584385/1‑148 (MQ=255) ttttGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACAttt < 1:3309330/148‑1 (MQ=255) tttGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACAtttt < 2:654242/148‑1 (MQ=255) tttGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACAtttt > 1:1267863/1‑148 (MQ=255) tttGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACAtttt < 2:814372/148‑1 (MQ=255) ttGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTa < 2:3001361/148‑1 (MQ=255) tGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTAt < 1:1591510/148‑1 (MQ=255) cgacgaCCAGGTTGATTTTGCAACCTGATGCGCAATAGGGTCAAACCGTGACGACTTTTTTCATCTGTCTCGCTCCAGTTAATAAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGtaa > 2:3497199/1‑146 (MQ=255) cgacgaCCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCa > 2:14021/1‑148 (MQ=255) cgacgaCCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCa > 2:1760112/1‑148 (MQ=255) acgacCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCAtt < 1:3121525/148‑1 (MQ=255) acgacCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCAtt < 2:1212529/148‑1 (MQ=255) acgacCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCAtt < 2:3010861/148‑1 (MQ=255) acCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTccc > 1:2176979/1‑148 (MQ=255) cAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTg < 1:2594721/148‑1 (MQ=255) gTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGata < 2:2105674/148‑1 (MQ=255) ttGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGatat < 1:3354125/148‑1 (MQ=255) aTTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTAc > 2:2025190/1‑148 (MQ=255) tttGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACgg > 2:1533646/1‑148 (MQ=255) gCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCa < 2:2734076/148‑1 (MQ=255) gCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCa < 1:1849232/148‑1 (MQ=255) aCCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACta > 1:2755384/1‑148 (MQ=255) aCCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACta < 1:2995209/148‑1 (MQ=255) aCCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACta < 2:738795/148‑1 (MQ=255) aCCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGATCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACta > 1:498287/1‑148 (MQ=255) ccTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACtat < 1:2697766/148‑1 (MQ=255) ccTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACtat < 1:645162/148‑1 (MQ=255) tGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACtattt > 2:1743923/1‑148 (MQ=255) tGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACtattt > 2:1824443/1‑148 (MQ=255) gATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACtattta < 1:975623/148‑1 (MQ=255) gATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACtattta < 2:1164468/148‑1 (MQ=255) aTGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACtatttat < 2:2341964/148‑1 (MQ=255) aTGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACtatttat > 2:2632067/1‑148 (MQ=255) tGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACtatttatt < 2:335958/148‑1 (MQ=255) tGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACtatttatt < 2:1618384/148‑1 (MQ=255) gcAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTCCAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCaa > 2:2366255/1‑148 (MQ=255) gcAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCaa > 2:603114/1‑148 (MQ=255) cAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCaaa < 2:2203269/148‑1 (MQ=255) aaTAGGGGCAAACCGTGTCGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCCGATATTACGGGCACTATTTATTCaaaa < 1:1855676/148‑1 (MQ=255) aaTAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCaaaa < 1:14021/148‑1 (MQ=255) tAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAAct > 2:480975/1‑148 (MQ=255) acgggCAAACCGTGACGACTTTATTCATCGGTCTCGCTCAAGTAAATCAAAACACGCATACGCGATCTCGACTACATTATGCATCATTTATAACACAATATATTTGGGGTCATTCCCTGATATAACGGGCACTATTTATTCAAAAcac > 2:1171660/3‑146 (MQ=255) gggCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTg > 1:2936220/1‑148 (MQ=255) gggCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTg < 2:2796850/148‑1 (MQ=255) cAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTCTGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACg > 1:3451980/1‑148 (MQ=255) aCCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGaaa > 2:1131129/1‑148 (MQ=255) ccGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGaaaa > 1:1171850/1‑148 (MQ=255) cGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGaaaaa < 1:3228390/148‑1 (MQ=255) acgacTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAgg > 2:2242211/1‑148 (MQ=255) acTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTg < 2:136858/148‑1 (MQ=255) cTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTgt < 1:231436/148‑1 (MQ=255) tCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAg < 2:3286872/148‑1 (MQ=255) tCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAg > 1:733670/1‑148 (MQ=255) cATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGt > 1:928345/1‑148 (MQ=255) cATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGt < 1:2831431/148‑1 (MQ=255) cATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGt < 2:2813467/148‑1 (MQ=255) cGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGtttt < 2:2854104/148‑1 (MQ=255) ggTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTtg < 2:570134/148‑1 (MQ=255) gTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTtga > 1:2432168/1‑148 (MQ=255) tctcGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTtgac > 1:1695373/1‑148 (MQ=255) tctcGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTtgac > 1:1603877/1‑148 (MQ=255) ctcGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTtgacg > 1:2546431/1‑148 (MQ=255) gCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTtgacgtga > 1:2056254/1‑148 (MQ=255) ccAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGacga > 1:210945/1‑148 (MQ=255) cAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGacgaa > 2:2834531/1‑148 (MQ=255) cAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGacgaa > 1:1937946/1‑148 (MQ=255) gTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGacgacac > 2:411536/1‑148 (MQ=255) gTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGacgaaac < 1:2736104/148‑1 (MQ=255) aatcaaatcaCGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGacgaaacgaa < 2:2175264/148‑1 (MQ=255) tcaaatcaCGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAAt < 2:923491/148‑1 (MQ=255) aactcaCGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATAc < 2:2651133/145‑1 (MQ=255) aaatcaCGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATAc < 2:428557/148‑1 (MQ=255) atcaCGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACcg > 2:572332/1‑148 (MQ=255) caCGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACcgcg < 1:1007575/148‑1 (MQ=255) aCGCATACGCGCTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGt > 2:1829771/1‑148 (MQ=255) gcTCTCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATc < 2:556266/148‑1 (MQ=255) ctctCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCa < 1:1533646/148‑1 (MQ=255) ctctCGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCa > 2:1640755/1‑148 (MQ=255) ctcGACTACAGTATGCATCTTTTATACCACATTTTCTGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCAcg < 1:193523/148‑1 (MQ=255) ctcGACTACAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCAcg < 1:193483/148‑1 (MQ=255) aCTACAGTATGGATCTTTTATACCACAGTTTAAGTTGGGTCAATCCCTGATATTACGGGCACTATTTATTCAATACTCTGACGAAAAACAGTCTTTCGACATATTTGACGTGACGAAACGAAAAAACGCGTGACAGCCATCACGCGGc > 2:3438393/1‑148 (MQ=255) aCAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCACGCGGCAGa < 1:480975/148‑1 (MQ=255) aCAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACTTGACGAAACGAAATACCGCGTGACAGCCATCACGCGGCAGa > 1:2236503/1‑148 (MQ=255) cAGTATGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCACGCGGCAGAc < 1:2877361/148‑1 (MQ=255) aTGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCACGCGGCAGACattt > 2:638460/1‑148 (MQ=255) tGCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCACGCGGCAGACatttt < 2:1695373/148‑1 (MQ=255) gCATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCACGCGGCAGACatttta < 2:169021/148‑1 (MQ=255) cATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCACGCGGCAGACattttat < 1:2702450/148‑1 (MQ=255) cATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCACGCGGCAGACattttat > 2:102729/1‑148 (MQ=255) cATCTTTTATACCACATTTTATGTGGGGTCATTCCCTGATATGACGGGCACTATTTAGTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGCAATACCGCGTGACAGCCATCACGCGGCAGACattttat < 1:1124277/148‑1 (MQ=255) gtatataCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCACGCGGCAGACATTTTAttttt < 2:1828623/145‑1 (MQ=255) tttATACCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCACGCGGCAGACATTTTAtttttt < 2:2969400/148‑1 (MQ=255) | GGACGATTTTGCCGTTATCGACGACCAGGTTGATTTTGCAACCTGATGCGCAATAGGGGCAAACCGTGACGACTTTTTTCATCGGTCTCGCTCCAGTTAATCAAATCACGCATACGCGCTCTCGACTACAGTATGCATCTTTTATGCCACATTTTATGTGGGGTCATTCCCTGATATTACGGGCACTATTTATTCAAAACTCTGACGAAAAACAGGCTGTCGTCAGTTTTGACGTGACGAAACGAAATACCGCGTGACAGCCATCACGCGGCAGACATTTTATTTTTT > CP009273/4289102‑4289389 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |