| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 503,944 | G→T | 100% | E91* (GAA→TAA) | ybaQ → | putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 503,944 | 0 | G | T | 100.0% | 490.1 / ‑6.7 | 181 | E91* (GAA→TAA) | ybaQ | putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (1/1); major base T (89/83); minor base A (7/0); total (97/84) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 183 total aligned reads displayed.
TGCACTGATCAATAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑GAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGAGCACCATTGCC > CP009273/503799‑504088 | tGCACTGATCAATAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGgaa‑taa < 1:12112/148‑1 (MQ=255) tGATCAATAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTggg < 1:1546237/148‑1 (MQ=255) tGATCAATAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCACCAGGCGGCGGTTGATGTTTTGGAAGTTTAAAACAACATGCGCACCCAGGAA‑AAATTggg > 1:2289057/1‑148 (MQ=255) tCAATAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGGTAAACCTCCAGGCGGCGGTTGATCTTTTGGAAGTTGAAAACAACAATCGCACCCAGGAA‑TAATTGGGACg > 1:1404691/1‑148 (MQ=255) tCAATAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAAACACCAGGCCGCGGGTGATCTTTTGGGAGTTGAAAACAACAATCGCACCCACGAA‑TAATTTGGACg > 1:1404668/1‑148 (MQ=255) cAATAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACgg < 2:953570/148‑1 (MQ=255) aTAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGAt < 1:2947270/148‑1 (MQ=255) tAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTTGCTAAACCACCCGGCGGCGGGTGATCTTTGGGGAGTTGAAAACAACAAGCGCACCCACGAA‑TAATTGGGTCGGGtt > 1:1701359/1‑148 (MQ=255) tAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCGAAACCACCCGGCGGCGGTTGATATTTGGGAAGTTGTAAAAAACATGCGCACCCACGAA‑AAATTGGGGCGGAtt > 2:610617/1‑148 (MQ=255) aCAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTTGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAACTTGTAAACAACATGCGCACCCAGGAA‑TAATTGGGCCGGATTGa > 2:2666302/1‑148 (MQ=255) cAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGaa < 1:2962097/148‑1 (MQ=255) aaTCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTTATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGaaa < 2:1466760/148‑1 (MQ=255) aaTCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGaaa < 2:2169384/148‑1 (MQ=255) aTCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGGTAAACCACCAGGCGGGGGTTGTTGTTTGGGAAGTTGTAAAAAACAAGCGCACCCAGGGA‑TAATTGGGGCGGAGTGTAAc > 1:3451010/1‑148 (MQ=255) aTCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAAc < 1:1012257/148‑1 (MQ=255) aTCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCGAAAACTACAGGCGGCGGGTGTTGGTTGGGAAGTTGAAAAAAACATGCGCACCCAGGGA‑AAATTGGGGCGGATTGAAAc > 1:1777293/1‑148 (MQ=255) tCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAAACTCCAGGCGGCGGGTGTTAGTTGGGGAGTTTAAAAAAACAATCGCACCCCGGCA‑TAAATTGGCCGGATTGaaaaa > 1:471799/1‑146 (MQ=255) tAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTg < 1:3449668/148‑1 (MQ=255) aCTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTTGCTAAACCACCAGGCGGCGGTTGATGTTTTGGAAGTTTGAAACAAAAGTCGCACCCAGGCA‑TAAATGGGACGGCTTGAAAAACTGGCt > 1:2835542/1‑148 (MQ=255) cACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGaa < 1:1962649/148‑1 (MQ=255) actactGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTTGGTAAAACTACAGGGGGCGGTTTTTGTTTGGGTAGTTGTAAACAAAATGCGCACCCCGGGA‑GAAATGTGGCGGGTTGAAAAAATGGGTGTat > 1:715064/1‑148 (MQ=255) actactGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAat < 1:2119557/148‑1 (MQ=255) tactGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGGTAAAACTCCACGCGGCGGGTGGTGTTTTGGGAGTTTTTAAAAACATGCGCCCCCAGGGA‑TAATTTGGGCGGCTTGTAACACTGGCTGGatat > 1:407087/1‑148 (MQ=255) actGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTTGGTAAAACAACAGGCGGGGGGTGTTGTTTGGGGAGTTGTAAAAAAAATGCGCACCCCGGAA‑TAATTGGGTCGGGTTGTAAAAGTGGGGGTATAtt > 1:3369806/1‑148 (MQ=255) actGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATAtt > 2:156584/1‑148 (MQ=255) actGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATAtt < 1:1844044/148‑1 (MQ=255) tGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCACCAGGGGGCGGGTGTTAGTTGGGGAGTTTAAAAAAAAATTCGCACCCCCGAATTAATTGGG‑CGGCTTGTAACCCTGGCTGaaaaattt > 1:790382/1‑142 (MQ=255) tGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGAGTTTTGGCTAAACCTCCAGGCGGCGGTTGATGGTTGGGAAGTTGAAAACAACATGCGCACCCAGGAC‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTg > 2:2804437/1‑148 (MQ=255) gaTGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCa < 2:1354861/148‑1 (MQ=255) gaTGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCa < 1:687202/148‑1 (MQ=255) ggCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTTGCTAAACCACCAGGCGGCGGTTTGTCTTTGGGAAGTTTTAAACAACAAGCGCACCCCGGCA‑TAATTGGGACGGATTGAAACACTGGCTGAAAATTTTGCACGc > 1:2337532/1‑148 (MQ=255) ggCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGGGGTTGATGTTTGGGTAGTTTAAAACAACATGCGCAACCAGGAA‑TAATTGGGAGGGATTTAAACAGTGGCTGAATATTCGGCACGc > 2:467283/1‑148 (MQ=255) tttCGTCTGGCGAAAGTTTTTGATACCACAGTCGAGTTTTTGCTAAAACACCACGGGGCGGGTGATCTTTGGGAAGTTTAAAACAAAAAGAGCACCCACGAA‑TAATTGGGGCGGCTTGAAACACTGGCTGAAAAATTGTCCCGCCCTg > 2:914801/1‑148 (MQ=255) ttCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGa < 2:234475/148‑1 (MQ=255) ttCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCGTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGa > 2:2057361/1‑148 (MQ=255) gTCTGGCGAAATTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAaga < 2:2472443/148‑1 (MQ=255) gTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAaga < 2:2472886/148‑1 (MQ=255) tCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGGTAAACCTCCAGGCGGCGGTTGGTCTTTGGGAAGTTGAAAAAAACATTCGCACCCAGGAA‑AAATTGGGGCGGATTGTAACAGTGGGTGAATATTTTGCACGCCCGGAagag > 1:3172302/1‑148 (MQ=255) cTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGTTCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGTAACACTGGCTGAATATTTGGCACGCCGTGAAGAGc > 2:1673064/1‑148 (MQ=255) tGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCg < 1:1058499/148‑1 (MQ=255) cGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGACTATTTGGCACGCCGTGAAGAGCGTGc > 2:3095146/1‑148 (MQ=255) aaaGTTTTTGATACCACAGTCTATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCaa > 1:3044679/1‑148 (MQ=255) aGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCacaa > 2:3436814/1‑148 (MQ=255) ttttGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGTA‑TAATTGGGACGGAGTGTAACAGTGGCGGAATATTTTGCACGCCGTGGAGTGCGTGCACAAAAg > 2:2061159/1‑148 (MQ=255) aTACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTcgc < 1:2370593/148‑1 (MQ=255) ccACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTa < 1:1570545/148‑1 (MQ=255) caGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAgg < 1:1167243/148‑1 (MQ=255) gTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGcc > 1:3136946/1‑148 (MQ=255) cGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCaa < 2:3261606/148‑1 (MQ=255) ttttGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAACAAGGTCGCGTAAGGCCAAAACa > 2:3222206/1‑148 (MQ=255) ttttGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACa < 1:833706/148‑1 (MQ=255) tttGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACAt < 1:3184397/148‑1 (MQ=255) gCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCt < 1:2061340/148‑1 (MQ=255) cTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCtt < 2:428078/148‑1 (MQ=255) cTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGATGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCtt < 1:2003320/148‑1 (MQ=255) aaCCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCAt < 2:823086/148‑1 (MQ=255) aaCCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCAt < 1:575386/148‑1 (MQ=255) tCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCg > 1:2019809/1‑148 (MQ=255) tCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCg > 1:566402/1‑148 (MQ=255) tCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCg > 2:1852267/1‑148 (MQ=255) aGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAg < 2:3451010/148‑1 (MQ=255) ggcggcGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGNCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAgg > 1:1783463/1‑148 (MQ=255) cggcggTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCCAAACATCGCTTCAGCTCGTAGGcc > 2:3273230/1‑148 (MQ=255) ggcggTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCg < 1:2455976/148‑1 (MQ=255) cggTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGa < 2:2495285/148‑1 (MQ=255) ggTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGAt < 2:2378251/148‑1 (MQ=255) tttaTCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATaa < 2:203460/145‑1 (MQ=255) ttGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATaa > 1:650613/1‑148 (MQ=255) tGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAg > 2:3028134/1‑148 (MQ=255) gATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TCATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAgg < 2:2606009/148‑1 (MQ=255) aTCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGc > 1:378614/1‑148 (MQ=255) tCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTATGCCGGATAAGGCg > 1:2740836/1‑148 (MQ=255) cTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGt > 2:1274675/1‑148 (MQ=255) cTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGt > 1:1513675/1‑148 (MQ=255) gggAAGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCAc < 1:87492/148‑1 (MQ=255) aaGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCAcgcc > 2:200674/1‑148 (MQ=255) aaGTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCAcgcc > 2:199394/1‑148 (MQ=255) gTTGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCAcgccgc > 1:750869/1‑148 (MQ=255) ttGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCgca < 1:1887719/148‑1 (MQ=255) tGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCgcat < 2:2805041/148‑1 (MQ=255) tGAAAACAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCgcat < 1:436729/148‑1 (MQ=255) aaaCAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCgcatccg > 2:2325576/1‑148 (MQ=255) aaaCAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCgcatccg > 2:45276/1‑148 (MQ=255) aaaCAACATGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCgcatccg > 2:45376/1‑148 (MQ=255) aacaTGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCgcatccggcat < 1:1607525/148‑1 (MQ=255) aacaTGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCgcatccggcat > 2:1026937/1‑148 (MQ=255) aacaTGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCgcatccggcat < 1:632333/148‑1 (MQ=255) aacaTGCGCACCCAGGAA‑TAATCGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCgcatccggcat < 2:2741870/148‑1 (MQ=255) acaTGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCgcatccggcatc > 2:2420/1‑148 (MQ=255) acaTGCGCACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCgcatccggcatc > 1:588871/1‑148 (MQ=255) acaTGCGCACCCAGGAA‑GAAGGGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAACAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCgcatccggcatc < 2:3094329/148‑1 (MQ=255) gcgcACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGAg > 1:112845/1‑148 (MQ=255) cgcACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGAGc < 2:2068915/148‑1 (MQ=255) cACCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGAGCAc > 1:3326482/1‑148 (MQ=255) aCCCAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGAGCAcc > 1:2192206/1‑148 (MQ=255) cccAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGAGCACCa < 2:1982073/148‑1 (MQ=255) cccAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGAGCACCa < 2:1404691/148‑1 (MQ=255) cccAGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGAGCACCa < 2:1404668/148‑1 (MQ=255) aGGAA‑TAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGAGCACCATTg > 2:1104097/1‑148 (MQ=255) gaa‑taaTTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGAGCACCATTGcc > 1:2168777/1‑148 (MQ=255) | TGCACTGATCAATAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAA‑GAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATCCGAGCACCATTGCC > CP009273/503799‑504088 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |