Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | CP009273 | 1,067,754 | T→A | 70.0% | H189L (CAC→CTC) | rutB ← | ureidoacrylate amidohydrolase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009273 | 1,067,754 | 0 | T | A | 70.0% | 313.5 / 172.6 | 199 | H189L (CAC→CTC) | rutB | ureidoacrylate amidohydrolase |
Reads supporting (aligned to +/- strand): ref base T (38/21); new base A (85/54); total (124/75) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.49e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 201 total aligned reads displayed.
TTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTATTCCGCGGCTGCGCAAAATGCTGTCCAGCGGCGTA > CP009273/1067609‑1067897 | ttGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGgaga < 1:755816/148‑1 (MQ=255) tGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGagag < 2:1649555/148‑1 (MQ=255) gTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTc < 2:602492/148‑1 (MQ=255) ttAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCt > 2:2451971/1‑148 (MQ=255) ttAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCt < 1:3092280/148‑1 (MQ=255) ttAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCt < 2:247580/148‑1 (MQ=255) caacTTAAGCGATATGATCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGACGCTGACCCAGCCAAAAAATGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCAGGAGAGTTGCGTCATCAAg > 2:593745/4‑148 (MQ=255) ccTTAAGCGATATGAGCACAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGca < 2:2087182/148‑1 (MQ=255) ccTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGca > 2:410857/1‑148 (MQ=255) ttAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGcacc > 2:199114/1‑148 (MQ=255) tAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGcacca > 1:2854098/1‑148 (MQ=255) tAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGcacca < 1:343527/148‑1 (MQ=255) tAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGcacca > 1:885256/1‑148 (MQ=255) aaGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGcaccac > 2:1866015/1‑148 (MQ=255) gCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGc > 1:2927286/1‑148 (MQ=255) atatGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGa > 2:1982445/1‑148 (MQ=255) tatGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCCAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGaa > 2:3343783/1‑148 (MQ=255) tatGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGaa > 2:302747/1‑148 (MQ=255) atGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGaaa > 2:494653/1‑148 (MQ=255) gAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATa > 1:1550184/1‑148 (MQ=255) gAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATa > 1:2854019/1‑148 (MQ=255) gAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATa > 1:2099815/1‑148 (MQ=255) aGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATAc < 2:2165491/148‑1 (MQ=255) gCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATACt < 2:2840596/148‑1 (MQ=255) gCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATACt < 2:2841299/148‑1 (MQ=255) gCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACt > 1:961756/1‑148 (MQ=255) acaGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATACTcc > 1:1682407/3‑148 (MQ=255) aaGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCa < 1:2464801/148‑1 (MQ=255) aGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAg > 1:1770055/1‑148 (MQ=255) gTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGaaaaa < 2:2450247/148‑1 (MQ=255) gTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGaaaaa < 1:3297321/148‑1 (MQ=255) agaAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCg < 2:960369/148‑1 (MQ=255) cgcgTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGt > 2:2323962/1‑148 (MQ=255) tCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCg < 2:2540544/148‑1 (MQ=255) cAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCg > 2:3369221/1‑148 (MQ=255) gAATGTTTCGACGTCGCTGACCCAGCCAAACAAGGTGTCGATATTGCACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGAt < 2:259643/148‑1 (MQ=255) aaTGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGAtt > 1:966932/1‑148 (MQ=255) aaTGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGAtt > 2:1574098/1‑148 (MQ=255) aaTGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGAtt > 2:575284/1‑148 (MQ=255) aTGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTc > 1:1092298/1‑148 (MQ=255) gTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGa < 1:302747/148‑1 (MQ=255) gTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGa < 1:3407603/148‑1 (MQ=255) gTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGa < 1:412697/148‑1 (MQ=255) aCGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGa > 2:963539/1‑148 (MQ=255) gTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACg < 2:3442896/148‑1 (MQ=255) tCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTACAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGt > 1:3456393/1‑148 (MQ=255) cGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGtt > 1:204909/1‑148 (MQ=255) cTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTgg < 1:532908/148‑1 (MQ=255) tGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGt < 2:1396537/148‑1 (MQ=255) gACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTACGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTa < 2:853548/148‑1 (MQ=255) ccAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCg < 2:676136/148‑1 (MQ=255) gCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATg > 1:1870125/1‑148 (MQ=255) gCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATg > 2:2311243/1‑148 (MQ=255) ccAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGc > 2:3096356/1‑148 (MQ=255) aaaaaGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCgg > 2:3217402/1‑148 (MQ=255) aaaaaGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCgg > 2:863905/1‑148 (MQ=255) aaaaGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGt > 2:1264047/1‑148 (MQ=255) aaaaGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGt > 1:2108375/1‑148 (MQ=255) aaaaGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGt > 1:1473779/1‑148 (MQ=255) aaaGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTg > 2:3399526/1‑148 (MQ=255) aaaGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTg > 2:690592/1‑148 (MQ=255) aGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGaa > 2:1938575/1‑148 (MQ=255) aGGTTTCGAGATTGCACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGaa < 2:2968616/148‑1 (MQ=255) ggTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGaaa > 1:1399859/1‑148 (MQ=255) ggTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGaaa > 1:3150790/1‑148 (MQ=255) ggTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGaaa > 1:1950410/1‑148 (MQ=255) ggTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGaaa < 1:1651865/148‑1 (MQ=255) ggTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGaaa > 1:372150/1‑148 (MQ=255) ggTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGaaa > 1:372038/1‑148 (MQ=255) ggTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGACGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGaaa > 2:768116/1‑148 (MQ=255) ttCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAAcc > 2:1421524/1‑148 (MQ=255) ttCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAAcc > 2:3051228/1‑148 (MQ=255) ttCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAAcc > 1:1117864/1‑148 (MQ=255) cGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAg < 1:667161/148‑1 (MQ=255) gATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGa < 2:2045203/148‑1 (MQ=255) tGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCg < 1:2510292/148‑1 (MQ=255) gAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGt > 1:2766375/1‑148 (MQ=255) aacaacGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGTGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTa > 1:2366326/1‑148 (MQ=255) caacGCTGCTTTCTTCGAAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGACGTAGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATTCCGGTGAAAACCAGATGGCGTAtt < 2:42093/148‑1 (MQ=255) aacGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTATTc < 1:248064/148‑1 (MQ=255) acGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTATTcc > 2:1067312/1‑148 (MQ=255) acGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTATTcc > 1:1162672/1‑148 (MQ=255) cgGCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGATGAAAACCAGATGGCGTATTCcgcg > 2:2290756/1‑148 (MQ=255) gCTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTATTCCGCGGc > 2:962350/1‑148 (MQ=255) cTTTCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTATTCCGCGGCt > 2:1633558/1‑148 (MQ=255) ttCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTATTCCGCGGCTgc > 2:1364093/1‑148 (MQ=255) ttCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTATTCCGCGGCTgc > 1:492114/1‑148 (MQ=255) ttCTGCGCAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTATTCCGCGGCTgc > 1:3272374/1‑148 (MQ=255) gcgcAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTATTCCGCGGCTGCGCaa > 2:2490182/1‑148 (MQ=255) cgcAAATTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTATTCCGCGGCTGCGCaaa > 2:1964921/1‑148 (MQ=255) aaaTTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTATTCCGCGGCTGCGCAAAATg < 1:806837/148‑1 (MQ=255) aaaTTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTATTCCGCGGCTGCGCAAAATg < 2:96895/148‑1 (MQ=255) aTTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTATTCCGCGGCTGCGCAAAATGCt > 2:1912211/1‑148 (MQ=255) aTTTCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTATTCCGCGGCTGCGCAAAATGCt > 1:2174722/1‑148 (MQ=255) tCGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTATTCCGCGGCTGCGCAAAATGCTGTc < 1:2663518/148‑1 (MQ=255) cGGCCCCGCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTATTCCGCGGCTGCGCAAAATGCTGTcc > 1:1702067/1‑148 (MQ=255) ccGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTATTCCGCGGCTGCGCAAAATGCTGTCCAgcgg < 1:410857/148‑1 (MQ=255) gCCTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTATTCCGCGGCTGCGCAAAATGCTGTCCAgcggcg > 1:2269626/1‑148 (MQ=255) cTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTATTCCGCGGCTGCGCAAAATGCTGTCCAGCGGCGTa < 1:727584/148‑1 (MQ=255) cTGGAGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTATTCCGCGGCTGCGCAAAATGCTGTCCAGCGGCGTa < 1:3377777/148‑1 (MQ=255) | TTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGAATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGTTGCGTCTTCAAGCACCACGCCGAAATACTCCAGAAAAAAGCCGTCGCGTAGCGTCGATTCGACGCAGACGTTGGTAGCGATGCCGGTGAAAACCAGATGGCGTATTCCGCGGCTGCGCAAAATGCTGTCCAGCGGCGTA > CP009273/1067609‑1067897 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |