| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,118,506 | A→T | 10.4% | L75Q (CTA→CAA) | yceB ← | lipoprotein, DUF1439 family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,118,506 | 0 | A | T | 10.4% | 418.2 / 7.6 | 171 | L75Q (CTA→CAA) | yceB | lipoprotein, DUF1439 family |
| Reads supporting (aligned to +/- strand): ref base A (77/71); new base T (5/16); total (82/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.92e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 171 total aligned reads displayed.
GTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATG > CP009273/1118360‑1118652 | gTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAg < 2:3098838/148‑1 (MQ=255) aCCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCCCACAGGGAGTTGATGTCCAGATTTGGGTGTCCGGGTTggg > 1:2099295/1‑148 (MQ=255) gTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTaa < 2:2601957/148‑1 (MQ=255) tCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGCACAGGGAGGTCATGTGCCGGTTGGGGTCGCCGGGTTGGGTTAc > 1:947209/1‑148 (MQ=255) cGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTGTGTCTACCGAAAAGGGAGTTCATGTCCAGATTGGCGGCTCCGGGTAGGGTAAcc > 1:1297779/1‑148 (MQ=255) cGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAAcc < 2:144575/148‑1 (MQ=255) cGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAAcc > 1:2057982/1‑148 (MQ=255) aTCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCACACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTa < 1:3077330/148‑1 (MQ=255) cGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTGTGACTAACGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTTGGGTAACCTTAtt > 1:195166/1‑148 (MQ=255) cGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTAtt > 1:1481625/1‑148 (MQ=255) cTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGctc < 1:192374/148‑1 (MQ=255) cTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGctc < 2:2897472/148‑1 (MQ=255) cTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGctc < 2:2897471/148‑1 (MQ=255) ttCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGctct > 2:1371051/1‑148 (MQ=255) ttCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGctct < 2:514155/148‑1 (MQ=255) ttCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGctct < 2:1474910/148‑1 (MQ=255) tCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCtt > 2:3155370/1‑148 (MQ=255) tCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCtt > 2:3154747/1‑148 (MQ=255) ccATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAAAACGGAGTTCATGTGCAGATTTTGGTCTCCGGTTAGGGTAACCGTATTCGGCTCGTc > 1:2959335/1‑148 (MQ=255) cATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGGGTCTCCGGGTAGGGTAACCTTATTCGGCTCTTcg > 2:3027035/1‑148 (MQ=255) tctcTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTcgcg > 1:2021833/1‑148 (MQ=255) ctTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGAcc > 2:2453657/1‑148 (MQ=255) aGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAAttt < 1:901925/148‑1 (MQ=255) ggAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGCGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTg > 2:514642/1‑148 (MQ=255) aaGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGc < 1:692210/148‑1 (MQ=255) aaGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGc < 1:2990116/148‑1 (MQ=255) gATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCGTATTCGGCTCTTCGCGACCAATTTGGcgg > 2:1438788/1‑146 (MQ=255) aTCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCGCTTCGCGACCAATTTGGCTgg > 2:2645112/1‑148 (MQ=255) aTCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTAGGCTCTTAGCGAACAAATTGGCttg > 2:2133190/1‑146 (MQ=255) tCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGt > 2:254134/1‑148 (MQ=255) tCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTAGCGACCAAATTGGCTGGt > 2:3064418/1‑148 (MQ=255) cACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGGTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGGCAg > 1:2338502/1‑148 (MQ=255) ccTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGt < 1:2392324/148‑1 (MQ=255) cTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTGTGACTACCGCAAACGGCGTTACTGTCCAGCTTGGCGTGTCCGGTTTGGGTAACCATATTCGGCTCTTAGCGACCAAATTGGGTGGTCAGGtt > 1:1537272/1‑148 (MQ=255) tttttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTGTGACTACCGAACAGGGCGTTGATGTGCAGATTGGCGTCTCCGGGTAGGGTAACCTTATTCGGCTCTTCGCGACCCATTTGGCTGGTCAGGgtt > 1:2426907/1‑148 (MQ=255) tttttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGttt < 2:399835/148‑1 (MQ=255) ttttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTg < 2:1018695/148‑1 (MQ=255) ttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTc < 1:1348304/148‑1 (MQ=255) tCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTAGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCa > 1:2038165/1‑148 (MQ=255) ttATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTAACGAACAGGGAGTTCATGTGCAGATTTGGGTCTCCGGTTAGGGTAACCTTATTAGGCTCTTCGCGACCAATTTTGCTGGTCAGGTTTTTGAGaa > 1:485069/1‑148 (MQ=255) tATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGGTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCCGGTTTGTCAGAAc > 1:2614860/1‑148 (MQ=255) tCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACaa < 1:1876118/148‑1 (MQ=255) cAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAat < 1:3009825/148‑1 (MQ=255) aaCACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTAACCAACAGGGAGTTCATTTCCAGATTGGCGGCTCCGGTTAGGGTAACCGTATTAGGCTCTTCGCGACCAAATTTGCTGGTCAGGTTTGTCAGAACAaaat > 1:3054811/1‑148 (MQ=255) acacGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATg < 1:1418986/148‑1 (MQ=255) acacGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACAACCGAACACGGAGTTCAAGTCCACATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAataag > 2:76008/1‑146 (MQ=255) cacGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATgg < 1:3188157/148‑1 (MQ=255) cGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTGTGACTACCGAACAGGGAGTTCATGTCCCGATTTGGGTCTCCGGGTAGGGTAACCGTATTAGGCGCTTCGCGACCAAATTTGCTGGTCAGGTTTGTCAGAACAAAATGGGc > 1:1718777/1‑148 (MQ=255) cGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGc < 2:103013/148‑1 (MQ=255) cGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCCAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCGTATTCGGCTCTTCGCGACCAAATTTGCTGGTCAGGTTTGTCAGAACAATATGGGc > 1:1718718/1‑148 (MQ=255) ggCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGt < 2:608901/148‑1 (MQ=255) gcTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCa < 1:2061528/148‑1 (MQ=255) cAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCCGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCccgccg > 2:1313965/1‑148 (MQ=255) aGCTTCAGTTTCATGGTCGCTTTCTGACTACCGACCAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCATTTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCgg < 2:2635896/148‑1 (MQ=255) aGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCgg > 2:1126645/1‑148 (MQ=255) gtttctttttCTTGGTCGTTTTTTGAATACCGAACTGGGTGTTATTGTCATGTTTGGTGTCTCTGGTTTGGTTATCCTTTTTCGGATCTTCGGTACGTTTTTGGATTGTCAGGTTTGTAATAACAATTTGGGCGTCAGCCACGCCggg < 2:1229651/141‑1 (MQ=255) tCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGACTTCATGTCCAGATTTGCGTCTCCGGGTTGGGTAACCATATTCGGCTCTTCGCGACCAATTTGGCGGGTCAGGGTTGTCAGAAGCATATGGGCGTCAGCCACGCCggggcc > 2:2208046/1‑145 (MQ=255) cAGTTTCTTGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTaaa < 2:2807582/148‑1 (MQ=255) cAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTaaa < 2:3338439/148‑1 (MQ=255) tttCATGGTCGCTTTCTGACTACCGAACAGGGAGTTGATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTTGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAAcag > 2:387741/1‑146 (MQ=255) tttCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTAGGCTCTTAGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATTGGCGTCAGCCACGCCGGGTAAAcag > 2:1795651/1‑146 (MQ=255) tttCATGGTCGCTTTCTGACTAACGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCATATTCGGCTCTTCGCGACCAAATTTGCTGGTCAGGTTTGTCAGAAAAATATGGGCGTCAGCCCCGCCGGGGAAAcag > 1:2562294/1‑146 (MQ=255) cATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGGAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTTTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGata > 2:1694656/1‑148 (MQ=255) tGGTCGATTTCTGACTACCGAACAGGGATTTCTTGTCCAGATTGGCGTCTCGGGTTTGGGTAACCTTTTTCGGCTCTTCGCTACAATTTTGGCTGGTCTGGTTTGTCATAACATTCTGGGCGACACCCACGCCGGGTAAACAGATATc < 1:131603/148‑1 (MQ=255) ggTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATGCGGCTCTGCGCCACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCt < 2:3386173/148‑1 (MQ=255) ggTCGCTTTCTGACTACCGAACAGGGAGTTAATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAAAAGATATCt > 2:251114/1‑148 (MQ=255) gTCTCTTTCTGACTACCGAACAGGGAGTTCTTGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCtt < 2:539011/148‑1 (MQ=255) tttCTGACTACCGAACCGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCATTTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTgag < 2:2359904/148‑1 (MQ=255) tCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGaa > 1:973910/1‑148 (MQ=255) gACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAatt > 1:2822885/1‑148 (MQ=255) aCTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAatta > 1:3491053/1‑148 (MQ=255) aCTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAatta > 2:2002054/1‑148 (MQ=255) tACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAattatt > 1:2255905/1‑148 (MQ=255) aCCTAACAGGGTGTTATTGTCCTGTGTGGCGTCGCGGTTTGGGGTACCTTTTTTGGGCTCTTCGCCACCATTTGGGGTGGTCCGTTTTGTCAGAACATTTTGGGCGGCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAAttatta < 1:1818532/148‑1 (MQ=255) aCCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAAttatta < 2:2022429/148‑1 (MQ=255) ccGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATtattat < 2:2243368/148‑1 (MQ=255) taaCAGGTTGTTCATGTCCAGATTGGCGTCTCCGGTTAGGTTAACCTTATTCGGCTGTTCGCTACCATTTTGGCTGGTCAGTTTTGTCATAACATTATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGt < 1:1865068/147‑1 (MQ=255) aaCTGGGAGTTCATGTCCAGATTGGCTTCTCCGGTTAGGGTAACCTTATTCGGATCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGtt < 1:2645112/148‑1 (MQ=255) aaCAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGtt > 1:532347/1‑148 (MQ=255) tgggTGTTCATGTCCAGATTGGCGTCTCGGTTTTGGGAAACCTTTTTCGGCTCTTCGCGACCAATTTGGGTGGTCTGTTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCg < 1:1694656/147‑1 (MQ=255) ggAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCa > 1:2947519/1‑148 (MQ=255) aGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAg > 1:1027822/1‑148 (MQ=255) aggTCCAGATTGGCGTCTCGGGTTTGGTTAACCTTATTCGGCTCTTCGCGACCATTTTGGCTGGTCAGGTTTGTAAGAAAAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACt < 2:3372704/146‑1 (MQ=255) tCCAGATGGGCGTCTCCGGTTAGGGTACCCTTATTCGGCTCTGCGCGACCAATTTGGCTGGTCTGTTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGt < 2:1880700/148‑1 (MQ=255) gccAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACAAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGt < 2:1879849/147‑1 (MQ=255) agtttGGCGTCTCGGGTTAGGTTAACATTATTCGGCTCTTCGCCACCAATTTGGCTGGTCAGTTTTGTCATAACAATATGGGCGACAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTaa < 2:2139210/145‑1 (MQ=255) taTTGGCGTCTCGGGTTTGGGTAACCTTATTCGGCTATTCGCGACCAATTGGGCTGGTCTGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAt < 2:3080894/147‑1 (MQ=255) gATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAt > 1:1449799/1‑148 (MQ=255) gATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAt > 1:1011348/1‑148 (MQ=255) aTTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAtt > 1:322616/1‑148 (MQ=255) ttGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCTGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAttt < 2:1101862/148‑1 (MQ=255) tgggCGTCTCCGGTTTGGTTAACCTTATTGGGCTCTTCGCGACAATTTTGGCTGTTCAGGTTTGTCACAACATTTTGGGCGTAAGCCACGCCGGGTAAACAGATATCTTTGGAGAAATTTTTATGTTTCGCAAGCGACTGGTTAAttt < 2:1544216/146‑1 (MQ=255) tGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTc < 2:1757599/148‑1 (MQ=255) cGTCCCGGGTTCGGTTAACCTTATGCGGCTCTCCGCCACAATTTGGGGGGGTCGGTTTTCACATAACAATAGGGGCGTCACCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTg < 1:3155370/148‑1 (MQ=255) ctcCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTc > 2:3113543/1‑148 (MQ=255) ccGTTTAGGGAAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGTTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCgg < 2:1297779/148‑1 (MQ=255) ccGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCgg > 1:1971414/1‑148 (MQ=255) ccGGTTAGGGTAACCTTATACGGCTCTACGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCgg < 2:2057982/148‑1 (MQ=255) gTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTCAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGa > 2:561050/1‑148 (MQ=255) gTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGa > 2:560999/1‑148 (MQ=255) | GTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATG > CP009273/1118360‑1118652 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |