Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 103,352 C→A 91.0% I103I (ATC→ATA)  lpxC → UDP‑3‑O‑acyl N‑acetylglucosamine deacetylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009273103,3520CA91.0% 499.1 / 43.0 190I103I (ATC→ATA) lpxCUDP‑3‑O‑acyl N‑acetylglucosamine deacetylase
Reads supporting (aligned to +/- strand):  ref base C (5/12);  new base A (85/88);  total (90/100)
Fisher's exact test for biased strand distribution p-value = 1.35e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.82e-01

Only 100 of 190 total aligned reads displayed.

AATCTGTGCGTGATACCATGCTCTGTACGTGTCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCGATAAGTGGGCTGAATTTAAGCCGTACAA  >  CP009273/103207‑103495
                                                                                                                                                 |                                                                                                                                               
aaTCTGTGCGTGATACCATGCTCTGTACGTGTCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAAt                                                                                                                                               <  1:3285839/148‑1 (MQ=255)
 aTCTGTGCGTGATACCATGCTCTGTACGTGTCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATg                                                                                                                                              <  1:307830/148‑1 (MQ=255)
 aTCTGTGCGTGATACCATGCTCTGTACGTGTCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATg                                                                                                                                              >  2:3126995/1‑148 (MQ=255)
   cTGTGCGTGATACCATGCTCTGTACGTGTCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGa                                                                                                                                            >  1:965677/1‑148 (MQ=255)
    tgtgCGTGATACCATGCTCTGTACGTGTCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGAc                                                                                                                                           >  2:3107628/1‑148 (MQ=255)
     gtgCGTGATACCATGCTCTGTACGTGTCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACg                                                                                                                                          >  1:2622519/1‑148 (MQ=255)
          tGATACCATGCTCTGTACGTGTCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAgc                                                                                                                                     >  1:788411/1‑148 (MQ=255)
               ccATGCTCTGTACGTGTCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGcgccgc                                                                                                                                >  2:771228/1‑148 (MQ=255)
                cATGCTCTGTACGTGTCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCt                                                                                                                               >  2:1267918/1‑148 (MQ=255)
                   gCTCTGTACGTGTCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCg                                                                                                                            >  2:3054879/1‑148 (MQ=255)
                   gCTCTGTACGTGTCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCg                                                                                                                            >  1:2648063/1‑148 (MQ=255)
                    ctctGTACGTGTCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGt                                                                                                                           >  1:2516352/1‑148 (MQ=255)
                    ctctGTACGTGTCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGt                                                                                                                           >  1:2516940/1‑148 (MQ=255)
                    ctctGTACGTGTCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGt                                                                                                                           <  1:1801745/148‑1 (MQ=255)
                     tctGTACGTGTCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGtt                                                                                                                          <  1:2348584/148‑1 (MQ=255)
                      ctGTACGTGTCTGGTCAACGAGCATGATGTACGGATGTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAACTCCCGATCATGGACGGCAGCGCCGCTCCGttt                                                                                                                         >  2:3446937/1‑148 (MQ=255)
                        gTACGTGTCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGt                                                                                                                       <  2:2173545/148‑1 (MQ=255)
                             tgtCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATAcc                                                                                                                  <  2:203682/148‑1 (MQ=255)
                               tCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACctg                                                                                                                <  1:2697604/148‑1 (MQ=255)
                               tCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACctg                                                                                                                <  2:2543432/148‑1 (MQ=255)
                               tCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACctg                                                                                                                <  1:689940/148‑1 (MQ=255)
                               tCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACctg                                                                                                                <  1:689803/148‑1 (MQ=255)
                                cTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACctgc                                                                                                               <  2:2377444/148‑1 (MQ=255)
                                  ggTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACctgctg                                                                                                             <  2:1580144/148‑1 (MQ=255)
                                   gTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCtgctgc                                                                                                            >  2:603075/1‑148 (MQ=255)
                                    tCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTgctgct                                                                                                           <  2:299109/148‑1 (MQ=255)
                                    tCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTgctgct                                                                                                           <  2:2717896/148‑1 (MQ=255)
                                     cAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCtt                                                                                                          <  2:1622632/148‑1 (MQ=255)
                                       aCGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGa                                                                                                        <  1:3169536/148‑1 (MQ=255)
                                       aCGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGa                                                                                                        <  1:3169483/148‑1 (MQ=255)
                                       aCGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGa                                                                                                        >  1:2900172/1‑148 (MQ=255)
                                        cGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGAc                                                                                                       >  1:360807/1‑148 (MQ=255)
                                          aGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGc                                                                                                     <  2:1305750/148‑1 (MQ=255)
                                            cATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCg                                                                                                   >  1:2775867/1‑148 (MQ=255)
                                             atgatgTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCgg                                                                                                  >  1:3115489/1‑148 (MQ=255)
                                              tgatgTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGt                                                                                                 >  1:2153443/1‑148 (MQ=255)
                                              tgatgTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGt                                                                                                 >  1:1870490/1‑148 (MQ=255)
                                                atgTACGGATTTCAACCGTAGAGCACCTCACTGCGGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTAt                                                                                               <  2:3312100/148‑1 (MQ=255)
                                                atgTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTAt                                                                                               >  2:1473904/1‑148 (MQ=255)
                                                   tACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATcga                                                                                            <  1:1921566/148‑1 (MQ=255)
                                                   tACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATcga                                                                                            >  2:2899624/1‑148 (MQ=255)
                                                    aCGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATcgac                                                                                           <  1:145993/148‑1 (MQ=255)
                                                       gATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAg                                                                                        <  2:1110447/148‑1 (MQ=255)
                                                        aTTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGt                                                                                       >  1:1703410/1‑148 (MQ=255)
                                                           tCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGa                                                                                    >  1:1048918/1‑148 (MQ=255)
                                                            cAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGaa                                                                                   >  2:3187335/1‑148 (MQ=255)
                                                            cAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGaa                                                                                   <  1:662034/148‑1 (MQ=255)
                                                            cAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGaa                                                                                   <  1:295576/148‑1 (MQ=255)
                                                               ccGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTg                                                                                <  2:1471895/148‑1 (MQ=255)
                                                                cGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTgc                                                                               >  2:1966020/1‑148 (MQ=255)
                                                                  tAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTgcgc                                                                             >  1:1535351/1‑148 (MQ=255)
                                                                     agCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCaa                                                                          >  1:1226739/1‑148 (MQ=255)
                                                                     agCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCaa                                                                          <  1:3126953/148‑1 (MQ=255)
                                                                        aCCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCaaaaa                                                                       <  1:931225/148‑1 (MQ=255)
                                                                         ccTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCaaaaaa                                                                      >  1:231926/1‑148 (MQ=255)
                                                                          cTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAAt                                                                     <  1:2246064/148‑1 (MQ=255)
                                                                           tCACTGCTGCTCTCGCGGGCTTTGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAAtt                                                                    <  2:2335558/148‑1 (MQ=255)
                                                                            cAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAAttt                                                                   <  2:2809054/148‑1 (MQ=255)
                                                                            cAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAAttt                                                                   >  2:1375282/1‑148 (MQ=255)
                                                                              aTGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGt                                                                 <  1:2379282/148‑1 (MQ=255)
                                                                               tgctgcTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGtt                                                                <  2:1147623/148‑1 (MQ=255)
                                                                                gctgctCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTc                                                               <  1:2129827/148‑1 (MQ=255)
                                                                                 ctgctCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCg                                                              >  1:2545255/1‑148 (MQ=255)
                                                                                       tcGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCaa                                                        >  1:544079/1‑148 (MQ=255)
                                                                                        cgcgGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCaaa                                                       >  1:1671706/1‑148 (MQ=255)
                                                                                           gggCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAagag                                                    <  1:837762/148‑1 (MQ=255)
                                                                                            ggCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAgaga                                                   <  1:1041003/148‑1 (MQ=255)
                                                                                             gCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGAc                                                  >  1:3128047/1‑148 (MQ=255)
                                                                                             gCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGAc                                                  >  1:1239843/1‑148 (MQ=255)
                                                                                             gCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGAc                                                  <  2:392494/148‑1 (MQ=255)
                                                                                                tGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGt                                               <  2:1680492/148‑1 (MQ=255)
                                                                                                    cATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCgt                                           >  1:1343357/1‑148 (MQ=255)
                                                                                                      tCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCgtgt                                         >  1:203942/1‑148 (MQ=255)
                                                                                                         aTAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGa                                      >  1:2399013/1‑148 (MQ=255)
                                                                                                         aTAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGa                                      >  1:2792132/1‑148 (MQ=255)
                                                                                                         aTAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGa                                      >  1:3253549/1‑148 (MQ=255)
                                                                                                         aTAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGa                                      >  1:635813/1‑148 (MQ=255)
                                                                                                          tAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGaa                                     >  1:1413435/1‑148 (MQ=255)
                                                                                                           aaCATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAg                                    <  1:570043/148‑1 (MQ=255)
                                                                                                           aaCATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTGGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAg                                    >  2:2555417/1‑148 (MQ=255)
                                                                                                            aCATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGa                                   >  2:218422/1‑148 (MQ=255)
                                                                                                            aCATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGa                                   <  2:1682205/148‑1 (MQ=255)
                                                                                                              aTTGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATg                                 <  2:308140/148‑1 (MQ=255)
                                                                                                                tGTTATCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGc                               >  2:2949153/1‑148 (MQ=255)
                                                                                                                    aTCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCtata                           <  1:3260249/148‑1 (MQ=255)
                                                                                                                     tCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCTATaa                          <  1:1641297/148‑1 (MQ=255)
                                                                                                                     tCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCTATaa                          >  2:2309438/1‑148 (MQ=255)
                                                                                                                     tCGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCTATaa                          <  1:1641248/148‑1 (MQ=255)
                                                                                                                      cGAAGTTAACGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCTATAAg                         <  2:2258941/148‑1 (MQ=255)
                                                                                                                       gAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCTATAAGt                        <  1:1267918/148‑1 (MQ=255)
                                                                                                                             aaCGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCTATAAGTGGGCTg                  >  2:500717/1‑148 (MQ=255)
                                                                                                                             aaCGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCTATAAGTGGGCTg                  >  2:720777/1‑148 (MQ=255)
                                                                                                                              aCGCGCCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCTATAAGTGGGCTGa                 <  2:2777294/148‑1 (MQ=255)
                                                                                                                                gcgcCGGAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCTATAAGTGGGCTGAAt               <  2:2647932/148‑1 (MQ=255)
                                                                                                                                      gAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCTATAAGTGGGCTGAATTTAAGc         >  1:1461337/1‑148 (MQ=255)
                                                                                                                                      gAAATCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCTATAAGTGGGCTGAATTTAAGc         <  2:2775867/148‑1 (MQ=255)
                                                                                                                                        aaTCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCTATAAGTGGGCTGAATTTAAGCCg       >  2:916196/1‑148 (MQ=255)
                                                                                                                                         aTCCCGATCATGGACGGCAGCGCCGGTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCGATAAGTGGGCTGAATTTAAGCCGt      <  2:697615/148‑1 (MQ=255)
                                                                                                                                          tCCCGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCTATAAGTGGGCTGAATTTAAGCCGTa     >  1:2593095/1‑148 (MQ=255)
                                                                                                                                             cGATAATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCTATAAGTGGGCTGAATTTAAGCCGTACaa  >  1:961515/1‑148 (MQ=255)
                                                                                                                                                 |                                                                                                                                               
AATCTGTGCGTGATACCATGCTCTGTACGTGTCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCGATAAGTGGGCTGAATTTAAGCCGTACAA  >  CP009273/103207‑103495

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑