| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,245,611 | G→T | 94.2% | F228L (TTC→TTA) | dhaK ← | dihydroxyacetone kinase, PTS‑dependent, dihydroxyacetone‑binding subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,245,611 | 0 | G | T | 94.2% | 496.2 / 22.1 | 174 | F228L (TTC→TTA) | dhaK | dihydroxyacetone kinase, PTS‑dependent, dihydroxyacetone‑binding subunit |
| Reads supporting (aligned to +/- strand): ref base G (2/8); new base T (76/88); total (78/96) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.45e-01 | |||||||||||
Only 100 of 174 total aligned reads displayed.
GATCGCCAGACTGGAGCGGTTGTTTGGTTTGTTGTTCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGAGAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATACCTATTGAGTGGCCTTGATTA > CP009273/1245466‑1245752 | gATCGCCAGACTGGAGCGGTTGTTTGGTTTGTTGTTCTTCCTGCCAACAGCCGTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACAATTCATCGCCGGGTTGATCAAGGGAAGATaa > 1:1815352/1‑148 (MQ=255)gATCGCCAGACTGGAGCGGTTGTTTGGTTTGTTGTTATTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATaa > 1:1658751/1‑148 (MQ=255) aTCGCCAGACTGGAGCGGTTGTTTGGTTTGTTGTTCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAg > 1:1061282/1‑148 (MQ=255) aTCGCCAGACTGGAGCGGTTGTTTGGTTTGTTGTTCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAg < 2:2884494/148‑1 (MQ=255) tCGCCAGACTGGAGCGGTTGTTTGGTTTGTTTTTCTTCCTGCCAACTGCCTTGTTTATAATACCAGAAACGCAAAGTGCGATGGTATGATCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTTTTAAAGGGAAGATaatg > 1:1259114/1‑146 (MQ=255) tCGCCAGACTGGAGCGGTTGTTTGGTTTGTTGTTCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAgg < 1:1937943/148‑1 (MQ=255) tCGCCAGACTGGAGCGGTTGTTTGGTTTGTTGTTCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAgg < 1:1937793/148‑1 (MQ=255) cGCCAGACTGGAGCGGTTGTTTGGTTTGTTGTTCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAggg < 2:261922/148‑1 (MQ=255) gCCAGACTGGAGCGGTTGTTTGGTTTGTTGTTCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAgggg < 1:3315916/148‑1 (MQ=255) gCCAGACTGGAGCGGTTGTTTGGTTTGTTGTTCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAgggg < 2:1927813/148‑1 (MQ=255) gACTGGAGCGGTTGTTTGGTTTGTTGTTCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGggcggc > 2:1136263/1‑148 (MQ=255) tGGAGCGGTTGTTTGGTTTGTTGTTCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGt < 2:415056/148‑1 (MQ=255) gAGCGGTTGTTTGGTTTGTTTTTATTCCTGCCAACAGCCATGTTTATAAACCCAGAAACCCAAAATGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACAATTAATCGACGGTTTGATAAAGGGAAGATAATGGGCGGCGGTCa > 1:1850985/1‑148 (MQ=255) gAGCGATTGTTTGGTTTGTTGTTCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCa < 1:1444595/148‑1 (MQ=255) gAGCGATTGTTTGGTTTGTTGTTCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCa < 1:3274775/148‑1 (MQ=255) aGCGGTTGTTTGGTTTGTTGTTCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCaa < 2:1667243/148‑1 (MQ=255) aGCGGTTGTTTGGTTTGTTGTTCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCaa > 2:76461/1‑148 (MQ=255) gCGGTTGTTTGGTTTGTTGTTCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAAt < 1:175927/148‑1 (MQ=255) cGGTTGTTTGGTTTGTTGTTCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATa < 1:3407468/148‑1 (MQ=255) cGGTTGTTTGGTTTGTTGTTCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATa < 2:2356893/148‑1 (MQ=255) gttgttTGGTTTGTTGTTCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATAcc > 1:2927502/1‑148 (MQ=255) ggtttgTTGTTCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCa > 2:1692406/1‑148 (MQ=255) tttgTTGTTCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCAcc > 1:1592513/1‑148 (MQ=255) ttgttCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGa < 1:2216306/148‑1 (MQ=255) ttgttCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGa < 2:2728836/148‑1 (MQ=255) ttgttCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGa < 2:2728793/148‑1 (MQ=255) ttgttCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGa < 2:2357531/148‑1 (MQ=255) ttgttCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGa < 1:570369/148‑1 (MQ=255) tgttCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGaa > 2:3336957/1‑148 (MQ=255) gttCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAAt < 1:2641077/148‑1 (MQ=255) ttcttcCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATg < 1:2072274/148‑1 (MQ=255) ttcCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCg < 2:1189784/148‑1 (MQ=255) tcCTTCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGa > 1:3352512/1‑148 (MQ=255) tcCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGa > 2:1776751/1‑148 (MQ=255) tcCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGa > 2:1776501/1‑148 (MQ=255) tGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGc > 2:3409255/1‑148 (MQ=255) ccAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCa > 2:1078897/1‑148 (MQ=255) ccAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCa > 2:2831015/1‑148 (MQ=255) tGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTc < 1:2088474/148‑1 (MQ=255) gCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTcc > 1:1142662/1‑148 (MQ=255) cTTGTTGATAATCCCAGACACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCAt < 1:247657/148‑1 (MQ=255) tgATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCAt < 1:1122551/148‑1 (MQ=255) aTAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCTGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTa > 2:1891967/1‑148 (MQ=255) tAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTAt < 2:1003742/148‑1 (MQ=255) aaTCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATc > 1:2424504/1‑148 (MQ=255) ccAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGAGAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGcc < 1:3122781/148‑1 (MQ=255) cAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCa > 1:1458794/1‑148 (MQ=255) aCGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTa > 1:2855546/1‑148 (MQ=255) gCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTaaa < 1:1898131/148‑1 (MQ=255) cAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTaaaa > 1:2746851/1‑148 (MQ=255) aaGTGCGATTGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAaaga > 1:2660307/1‑148 (MQ=255) aaGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAaaga > 2:1024581/1‑148 (MQ=255) aaGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGAGAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAaaga > 2:2548855/1‑148 (MQ=255) aaGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGAGAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAaaga < 1:141009/148‑1 (MQ=255) cGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGtt < 2:88079/148‑1 (MQ=255) cGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGtt < 1:1514353/148‑1 (MQ=255) gATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGttt < 2:1592513/148‑1 (MQ=255) aTGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATAAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATTCCGACGCCAAACTCCATCTCATTATCCGCCAGTGTAAACGAAGGTTTg > 1:2656098/1‑148 (MQ=255) tGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGc < 2:657179/148‑1 (MQ=255) tATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCcg > 1:1541150/1‑148 (MQ=255) aGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGc > 1:2195570/1‑148 (MQ=255) aGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGc > 2:2424334/1‑148 (MQ=255) aGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGc > 2:489920/1‑148 (MQ=255) ttACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAAc < 1:2394267/148‑1 (MQ=255) aCCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACgg > 2:76399/1‑148 (MQ=255) ccAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGt > 1:2977576/1‑148 (MQ=255) ccAGCAGGGTGTCGAACATTTCATCGACGGGTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGt > 1:749382/1‑148 (MQ=255) cagGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAg < 1:2267752/148‑1 (MQ=255) ggTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCa < 1:1182636/148‑1 (MQ=255) ggTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCa < 2:3020850/148‑1 (MQ=255) tgtCGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCAcc > 2:3003569/1‑148 (MQ=255) cGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCgag < 2:1259114/148‑1 (MQ=255) cGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCgag < 2:3352512/148‑1 (MQ=255) cGAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCgag < 1:2397035/148‑1 (MQ=255) gAACATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCgaga > 1:280218/1‑148 (MQ=255) aaCATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATAATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGagag > 1:2525710/1‑148 (MQ=255) aCATTTCATCGACGGGTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGc > 2:657545/1‑148 (MQ=255) cATTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCg > 2:2898285/1‑148 (MQ=255) aTTTCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGa < 1:635004/148‑1 (MQ=255) tttCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACAGAGAGCGAt > 2:2057090/1‑148 (MQ=255) ttCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATa > 2:2263664/1‑148 (MQ=255) ttCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATa < 1:374236/148‑1 (MQ=255) ttCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATa > 1:570272/1‑148 (MQ=255) ttCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATa > 1:987744/1‑148 (MQ=255) tCATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATAc < 1:75942/148‑1 (MQ=255) cATCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATAcc < 2:1476043/148‑1 (MQ=255) aTCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATACCt < 2:1984295/148‑1 (MQ=255) aTCGACGGTTTGATCAAGGGAAGAGAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATACCt < 1:1716871/148‑1 (MQ=255) tCGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATACCTa < 2:517789/148‑1 (MQ=255) cGACGGTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATACCTAt > 2:126707/1‑148 (MQ=255) gTTTGATCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATACCTATTGAGt < 1:2792378/148‑1 (MQ=255) tCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATACCTATTGAGTGGCCtt > 1:2296639/1‑148 (MQ=255) tCAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATACCTATTGAGTGGCCtt > 1:2298457/1‑148 (MQ=255) cAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATACCTATTGAGTGGCCTTg < 2:2796953/148‑1 (MQ=255) cAAGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATACCTATTGAGTGGCCTTg < 2:8464/148‑1 (MQ=255) aaGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATACCTATTGAGTGGCCTTGa < 2:264418/148‑1 (MQ=255) aaGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATACCTATTGAGTGGCCTTGa > 1:2817849/1‑148 (MQ=255) aaGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATACCTATTGAGTGGCCTTGa > 1:2817855/1‑148 (MQ=255) aaGGGAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATACCTATTGAGTGGCCTTGa < 1:1024581/148‑1 (MQ=255) gggAAGATAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATACCTATTGAGTGGCCTTGatt < 1:1293195/148‑1 (MQ=255) | GATCGCCAGACTGGAGCGGTTGTTTGGTTTGTTGTTCTTCCTGCCAACTGCCTTGTTGATAATCCCAGAAACGCAAAGTGCGATGGTATGAGCCATTTACCAGCAGGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGAGAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATACCTATTGAGTGGCCTTGATTA > CP009273/1245466‑1245752 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |