| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,364,366 | G→A | 95.0% | intergenic (+106/‑107) | pspE → / → ycjM | thiosulfate:cyanide sulfurtransferase (rhodanese)/alpha amylase catalytic domain family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,364,366 | 0 | G | A | 95.0% | 548.1 / 16.3 | 178 | intergenic (+106/‑107) | pspE/ycjM | thiosulfate:cyanide sulfurtransferase (rhodanese)/alpha amylase catalytic domain family protein |
| Reads supporting (aligned to +/- strand): ref base G (5/4); new base A (62/107); total (67/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01 | |||||||||||
Only 100 of 178 total aligned reads displayed.
GCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAGAAAATTACGGATTACCTGGACGAAATCT > CP009273/1364223‑1364509 | gCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTGTGTCACACCTTATTTAAATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTACCTAGTaa > 2:3136595/1‑148 (MQ=255) ccTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTaaa < 1:1904731/148‑1 (MQ=255) gAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTGTGTGAAACCGTATTTAAATAACCAAAGATTTTTTGGGTCAGCGCACAAAAAAGCATTTTGACTAGTaaaaaa > 1:556375/1‑148 (MQ=255) aGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGa < 1:1169299/148‑1 (MQ=255) cATCGCAATGCCGAAGGTCAACGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGAttt < 2:2675347/148‑1 (MQ=255) cATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGAttt < 2:2431905/148‑1 (MQ=255) cATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGAttt < 1:378866/148‑1 (MQ=255) aTCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTc < 1:1654028/148‑1 (MQ=255) tCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTcc < 2:628568/148‑1 (MQ=255) cGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCATTGACACCATTTTTAAATACCCATAATTTTTTTTCGTAAACTCAAAAAAAAGCTTTTTACCAACTAAAAAATTAtttaca > 1:2919221/1‑145 (MQ=255) cAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGc < 1:2314362/148‑1 (MQ=255) aaTGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCg < 1:419884/148‑1 (MQ=255) tGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTTTGTGACACCTTTTTTAAATACCCAAAGATTATTTGCGTCAGCTCACAAATAAGCTTTTTACCTAGTAAAAAAATATTTACTGCGTg > 2:1020524/1‑148 (MQ=255) tGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTg < 1:1991034/148‑1 (MQ=255) ccGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGAc < 1:794840/148‑1 (MQ=255) ccGAAGGTCAAAGGTAAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGAc < 1:3008763/148‑1 (MQ=255) aGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTaaa < 2:1640924/148‑1 (MQ=255) ggTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTaaaa < 2:738871/148‑1 (MQ=255) acggTAAAAAGAATACACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCtt < 2:3358/146‑1 (MQ=255) aaGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCtt < 2:1656691/148‑1 (MQ=255) aGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCGTATTTACATCCCCCAAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCGAGTAAAAAATTATTTACTGCGTGACTAAAACCCTtg > 2:108567/1‑148 (MQ=255) ttAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGc < 1:1647200/148‑1 (MQ=255) aaaGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCa < 1:2057976/148‑1 (MQ=255) aaGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCaa < 1:811949/148‑1 (MQ=255) aaGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCaa < 1:811951/148‑1 (MQ=255) aGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAAt < 1:2646926/148‑1 (MQ=255) aGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAAt < 1:1978769/148‑1 (MQ=255) aaTTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTg < 1:1585035/148‑1 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGAc < 2:1981084/148‑1 (MQ=255) tCACCATGAGCGGCGCTTATGCGCCGTATTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACa < 2:52193/148‑1 (MQ=255) ccATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGtt < 2:2141152/148‑1 (MQ=255) ccATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGtt < 2:3107893/148‑1 (MQ=255) aTGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTa < 1:697463/148‑1 (MQ=255) tGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTAAATCCCCATAGATTATTTTCGTCAGCTCACAAAAACGCTTTTTCCCAAGTAAAAAATTTTTTCATGCGTGACTAAAAACCGTGTGCTAAATTGACAGTTTAt > 2:2641307/1‑148 (MQ=255) tGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCCTATTTAAATACCCAAAGATTATTTTAGTCATCTCACAAAAAAGCTTTTTACCTAGTAAAAAAATATTTACATGGTGACAAAAACCCATGTGGTCAAATTACAGTTTAt > 2:1373914/1‑148 (MQ=255) gcggcgCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTAtttt < 2:1278442/148‑1 (MQ=255) gcggcgCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTAtttt < 1:2024023/148‑1 (MQ=255) cggcgCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTc < 1:3357390/148‑1 (MQ=255) gcgcTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTg < 2:2706605/148‑1 (MQ=255) cgcTTATGCGCCGTTTTTTTTTCTGTCACACCATATTTACAACCCCAAAGATTATTTTCGTCAGCTAACAAAAAAGCTTTTTACCAATTAAAAAAATATTTACTTCGTGAAAAAAAAACATTTTCTCAAATTAAACTTTAttttattc > 1:2349612/1‑144 (MQ=255) cTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCgg < 1:295450/148‑1 (MQ=255) ttATGCGCCGTTTTTTTTTATTTGAAAACATATTTTAAAACCCAAATATTATTTTAGTAAGCTAAAAAATAAGCATTTTAACTAATTAAAAATTATTTACATCGTTAATAAAACACATGTTCTGAATTTACAGTTTAttttattagga > 2:3273709/1‑141 (MQ=255) tATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGag < 1:3372556/148‑1 (MQ=255) tGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGagta < 1:2734676/148‑1 (MQ=255) cGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGtctc < 1:74476/148‑1 (MQ=255) cGTTTTTTTTTCTGTCACACCTTATTTAAATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAAAGATTTCCTGCGTGACAAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGagtagtata > 2:376050/1‑145 (MQ=255) ttttttttCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCg < 2:1551931/148‑1 (MQ=255) tttttttCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGt < 1:1737615/148‑1 (MQ=255) tttttttCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGt < 2:1831029/148‑1 (MQ=255) ttttCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTc < 2:853354/148‑1 (MQ=255) gTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGa < 1:2610896/148‑1 (MQ=255) cacaCCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGAcc > 1:2987568/1‑148 (MQ=255) acacCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCg > 2:2133043/1‑148 (MQ=255) acCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGttt > 1:2117144/1‑110 (MQ=255) ccTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTa > 1:849210/1‑148 (MQ=255) ttATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTAcc > 1:1049601/1‑148 (MQ=255) tATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCa > 1:1710136/1‑148 (MQ=255) tATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCGAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCa < 1:48724/148‑1 (MQ=255) tttACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACg < 1:1605678/148‑1 (MQ=255) tttACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACg < 1:1605713/148‑1 (MQ=255) tttACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACg > 2:1998717/1‑148 (MQ=255) tCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAgg > 1:675920/1‑148 (MQ=255) cccATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCa < 1:341796/148‑1 (MQ=255) ccATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCaa < 2:3252429/148‑1 (MQ=255) ccATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCaa < 1:1933319/148‑1 (MQ=255) cATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAAc < 1:2647358/148‑1 (MQ=255) cATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAAc < 1:2828731/148‑1 (MQ=255) aTAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACa > 1:200692/1‑148 (MQ=255) aTAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACa > 2:3033594/1‑148 (MQ=255) tAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACAt > 1:262909/1‑148 (MQ=255) aGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATg > 2:1712702/1‑148 (MQ=255) aGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATg > 2:3453671/1‑148 (MQ=255) attattTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGaa > 1:1351314/1‑148 (MQ=255) tattTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAAc > 1:355259/1‑148 (MQ=255) tattTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAAc > 1:2466939/1‑148 (MQ=255) attTGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACa > 2:21364/1‑148 (MQ=255) tttGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAg > 1:1020310/1‑148 (MQ=255) tttGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAg > 2:2823352/1‑148 (MQ=255) tttGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAg < 1:1489735/148‑1 (MQ=255) tttGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAg > 2:2373255/1‑148 (MQ=255) tttGCGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAg > 1:2772986/1‑148 (MQ=255) cGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAGaaaa < 2:2554375/148‑1 (MQ=255) cGTCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAGaaaa < 2:667059/148‑1 (MQ=255) tCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAGAAAAtt > 2:2590762/1‑148 (MQ=255) tCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAGAAAAtt > 2:2397334/1‑148 (MQ=255) tCAGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAGAAAAtt > 1:1302309/1‑148 (MQ=255) aGCTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAGAAAATTAc < 1:1104692/148‑1 (MQ=255) cTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAGAAAATTACgg > 1:1964352/1‑148 (MQ=255) cTCACAAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAGAAAATTACgg > 1:156521/1‑148 (MQ=255) tCACAAATACGCTTGTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGGTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAGAAAATTACGGa < 2:2386139/148‑1 (MQ=255) cacaAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAGAAAATTACGGAt < 1:3136595/148‑1 (MQ=255) acaAATACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAGAAAATTACGGAtt > 1:1784224/1‑148 (MQ=255) aaaTACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAGAAAATTACGGATTAc < 2:3232790/148‑1 (MQ=255) aaaTACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAGAAAATTACGGATTAc < 1:3061599/148‑1 (MQ=255) aaaTACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAGAAAATTACGGATTAc < 2:2165118/148‑1 (MQ=255) tACGCTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAGAAAATTACGGATTACCTg > 2:1221523/1‑148 (MQ=255) cTTTTTCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAGAAAATTACGGATTACCTGGACg > 2:185990/1‑148 (MQ=255) ttttCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAGAAAATTACGGATTACCTGGACGaa > 2:2065528/1‑148 (MQ=255) tttCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAGAAAATTACGGATTACCTGGACGaaa > 2:2038244/1‑148 (MQ=255) tttCCCTAGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAGAAAATTACGGATTACCTGGACGaaa > 1:1763526/1‑148 (MQ=255) | GCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGTAGTCTCTCGTTTCATGGGACCGCTACCACGGAAAGGCAACATGAAACAGAAAATTACGGATTACCTGGACGAAATCT > CP009273/1364223‑1364509 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |