| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,386,008 | G→T | 100% | Q35K (CAG→AAG) | ycjY ← | S9 homolog non‑peptidase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,386,008 | 0 | G | T | 99.0% | 711.2 / ‑1.6 | 242 | Q35K (CAG→AAG) | ycjY | S9 homolog non‑peptidase family protein |
| Reads supporting (aligned to +/- strand): ref base G (2/2); new base T (116/122); total (118/124) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 246 total aligned reads displayed.
AACTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTG > CP009273/1385863‑1386152 | aaCTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTAt > 2:2452483/1‑148 (MQ=255) cTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTG‑TTGTTTTAAGCCCCCACCAGGGTGAGATAACAAAAATGCCGTATAc > 1:2518192/1‑148 (MQ=255) gACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTg < 2:1079445/148‑1 (MQ=255) gACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTg < 2:3270606/148‑1 (MQ=255) gCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGt < 1:182079/148‑1 (MQ=255) cgccACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAAAGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTtcat‑c > 2:1402270/1‑148 (MQ=255) cACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTGGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑Caaa < 1:2953738/148‑1 (MQ=255) cTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAAtt < 1:1899940/148‑1 (MQ=255) cTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTT‑TTGTTTTAAGCCCCCCCCCCGGGGGGATAAAACAAATTCCATATAAAGACCGGGTTCAA‑Caaaat > 1:1355899/1‑146 (MQ=255) cACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTgg < 1:176775/148‑1 (MQ=255) aCCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTTAAGCCCCCACCAGGGTGAGATAACACAATTTCCTTTTAATGAAGGGTTTGAT‑CAAAATTTTGa > 2:2717444/1‑148 (MQ=255) aCCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGa < 2:2890937/148‑1 (MQ=255) ccTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAAAGCCCCCACCTGGGTGAGATAACACAAATGCCTTATAATGACGGGTTTAAT‑CAAATTTTTGAg > 2:2253966/1‑148 (MQ=255) cTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAgg < 1:1988679/148‑1 (MQ=255) cTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTG‑TTCTTTAACGCCCCCCCCGGGGGGATATAACACAAATTCCTTATACTGACGGGTTTACT‑CAAATTTtggtgg > 2:745531/1‑148 (MQ=255) ttGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTG‑TTGTTTAACGCCCCCACCAGGGTGTGATAACACAAATGCCGTATAATGACGGGTTTCAG‑AAAATTTTTGTggg > 2:651497/1‑148 (MQ=255) tGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGa < 1:1502134/148‑1 (MQ=255) gATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGaa < 1:657105/148‑1 (MQ=255) gATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGaa < 1:3104694/148‑1 (MQ=255) aTAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTGTTTAACGCCCCCACCGGGGTGAGATAACAAAATTGCCATATAATGACGGGTTTCAT‑CAAATTTTTGAGGGgaa > 1:545126/1‑148 (MQ=255) tAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAAt < 2:193037/148‑1 (MQ=255) tAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAAt < 1:2363426/148‑1 (MQ=255) tAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAAt < 2:1535423/148‑1 (MQ=255) tAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAAt < 2:2413436/148‑1 (MQ=255) tAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAAt < 1:1098073/148‑1 (MQ=255) aaGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATa < 1:130254/148‑1 (MQ=255) aGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTG‑TTGTTTAACGCCCCCCCCAGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAAATTTGGAggggcatat > 1:2264172/1‑142 (MQ=255) aTGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGAt > 2:3175282/1‑148 (MQ=255) aTGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTG‑TTGTTTTAAGCCCCCACCCGGGGGAGATAACACAAATTCCTTATACAGACGGGTTTGAT‑CAAATTTTTGTGGGAAatatat > 1:2528476/1‑148 (MQ=255) tGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTG‑TTGTTTTACGCCCCCCCCCGGGGGTGTTAACACAAATGCCGTGTAATTACGGGGTTGAT‑CAAAATTTTGTGGGTACTATATc > 1:2704106/1‑148 (MQ=255) aTAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTT‑TTGTTTTAAGCCCCCCCCAGGGGGTGATTAAACAAATGGCTTATAAAGACGGGTTTGATAAAAATTTTGGGGGGAAA‑AGATAACAGCa > 1:3388550/1‑148 (MQ=255) aatcAATAGTGACAAATCGCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGTGTGATATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATATATCACTGCAGa < 2:3481675/145‑1 (MQ=255) aaGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTTTTTTAATCCCCCCACACGGG‑GATATAAAAAAAATGCATTATAAATACGGGTTTAAT‑CAAATTTTTGTGGGTAATATATAACTGCAGa > 1:2544751/1‑148 (MQ=255) aaGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGa < 2:2646146/148‑1 (MQ=255) aaGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCGGGGTGAGATAACACAAATGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGa > 2:3211126/1‑148 (MQ=255) aaGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTG‑GTGTTTAAAGCCCCCACCCGGGGGGGATAACAAAATAGCCTTATACTGACGGGTTTGAT‑AAAAATTTGGTGGGAAATAGATAAATGCCGa > 1:796032/1‑148 (MQ=255) cAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACaa < 1:3215417/148‑1 (MQ=255) aaTAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACaaa < 2:1758623/148‑1 (MQ=255) aaTAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACaaa < 1:2573/148‑1 (MQ=255) aaTAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACaaa < 1:2496917/148‑1 (MQ=255) tAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTTTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTTACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATAAAAGCAGACAAaga > 2:482171/1‑148 (MQ=255) aGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAagag < 1:3308091/148‑1 (MQ=255) tGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACTCAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGATGGAAATAGATCACTGCAGACAAAGAGAt < 2:3269508/148‑1 (MQ=255) tGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGAt < 2:3417730/148‑1 (MQ=255) tGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGAt < 2:186312/148‑1 (MQ=255) tGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGAt < 2:3270840/148‑1 (MQ=255) gACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTGTTTAACGCCCCCACCAGGGTGAGATAAAACAAGTGCCATATACTGACGGGTTTCAA‑CAAATTTTGGATGGGAATAGATAACTGCAGACAAAGAGATg > 2:3139130/1‑148 (MQ=255) gACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATg < 2:783412/148‑1 (MQ=255) aCAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAAATGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATgg > 2:1445262/1‑148 (MQ=255) cAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGt < 2:2780001/148‑1 (MQ=255) aaaTCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTGTTTAACGCCCCCACCTGGGTGTGATAAAACAAATTCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATATATAACTGCACACAAAGAGATGGtt > 1:1431308/1‑148 (MQ=255) tCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGa < 1:3508339/148‑1 (MQ=255) cccTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGACCCCACCAGGGTGAGATAACAAAAATTACTTATAAAGAAGGGTTTGAA‑CAAAATTTTGAGGGAAATATAAAACTACAGAAAAACAGATGTTTGGat > 2:1306990/1‑148 (MQ=255) ttttCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAAAGCCCCCACCCGGGGGAGATAACACAAATTCCGTATACAGAAGGGTTTCAA‑CAAAATTTTGGGGGCAAAAAATCACAGCAGACAAAGCAATGGGTGGattat > 1:3148763/1‑148 (MQ=255) ttttCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTG‑TTGTTTAAAGCCCCCCCCCGGGTGAGATAACACCATTGCCGTATAATTACGGGGTTAAT‑GAAATTTTGGTGGGAAATAGATAAAAGCAGACAAAGAGATGGTTGGttttt > 1:1127626/1‑146 (MQ=255) tttCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTAAT‑CAAATTTTTGTGGGAAATAGATCACTGCAGACAAAGAGATGGTTTGattatt > 2:1821517/1‑148 (MQ=255) tCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGc < 1:2743017/148‑1 (MQ=255) cGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTG‑TTGTTTTAAGCCCCCACCGGGGTTAGATAAAAACAATGACATATAATTACGGGTTTGAT‑GAAATTTTTGATGGAAATAGATCACAGCAGACAAACAGATTGGTTGtttatttatg > 2:630585/1‑144 (MQ=255) gCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGt < 2:1614037/148‑1 (MQ=255) gCCAGTTTTTTGGCATAGGTTCCGGCCGTGTG‑TTGTTTAACGCCCCCACCTGGGTGAGATAAAACAAATGACATATAATTACGGGTTTAAT‑CAAAATATTGTGGGAAATAGATAACTGCACACAAACATATGGTTGGattatttgtgt > 2:1039503/1‑143 (MQ=255) ccAGTTTTTTGGCATAGGTTCCGGCCGTGTG‑TTGTTTAAACCCCCCACCCGGGTGAGATAAAACAAATGCCGTATAATTACGGGTTTGAT‑CAAATTTTGGAGGGAAATATAACAAAGCACACAAATAGAGGGTTGGATGATTggggtt > 2:2649145/1‑143 (MQ=255) aGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAg < 1:2194935/148‑1 (MQ=255) tttGGCATAGGTTCCGGCCGTTTG‑GTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAg < 1:1420860/148‑1 (MQ=255) gCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGa < 1:1039503/148‑1 (MQ=255) aTAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACt < 2:3102689/148‑1 (MQ=255) aTAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACt < 1:2341465/148‑1 (MQ=255) gTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTttat < 1:834374/148‑1 (MQ=255) ttCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTttatt < 1:2239396/148‑1 (MQ=255) ttCCGGCCGTTTG‑TTCTTTAAAGCCCCCACCAGGGTGAGATAAAAAAAATTCCATATAAAGACGGGTTTCAA‑CAAATTTTGGAGGGAAATAGATAACTGCAGAAAAAAAGATTGTTGGATTATTTCTGTTAGTGAAACAGAATttatt > 2:835064/1‑148 (MQ=255) ttG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCAtt > 1:2073533/1‑148 (MQ=255) ttG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCAtt < 2:2606575/148‑1 (MQ=255) tG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTc < 1:2452483/148‑1 (MQ=255) ttCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCg > 1:2965621/1‑148 (MQ=255) ttCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCg > 1:2875793/1‑148 (MQ=255) tCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGt < 1:731722/148‑1 (MQ=255) ttAACGCCCCCACCTGGGTGAGATAACACAATTGACTTATACTGACGGGTTTCAT‑CAAATTTTTGAGTGATATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTcc < 2:1320792/148‑1 (MQ=255) aaCGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTc > 2:118019/1‑148 (MQ=255) cGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCAt > 1:1171732/1‑148 (MQ=255) gCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATg < 1:2253966/148‑1 (MQ=255) cccccACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATgg > 1:1024752/1‑148 (MQ=255) cccACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAg < 2:2736716/148‑1 (MQ=255) cccACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAg < 2:780253/148‑1 (MQ=255) cACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGtt < 2:2989338/148‑1 (MQ=255) cACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGtt > 1:3430254/1‑148 (MQ=255) cACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGtt > 2:2621485/1‑148 (MQ=255) cACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGGTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGtt > 2:864314/1‑148 (MQ=255) aCCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTg > 2:1485672/1‑148 (MQ=255) tGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCg > 2:673411/1‑148 (MQ=255) gggTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCgg < 1:745051/148‑1 (MQ=255) gggTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCgg > 1:3335727/1‑148 (MQ=255) ggTGAGATAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATAATTCCGTTCCTCATGGAGTTGTCGGt > 1:487428/1‑148 (MQ=255) agaTAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGt > 1:279212/1‑148 (MQ=255) gaTAACACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGtt > 1:894051/1‑148 (MQ=255) aaCACAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTa < 2:2263724/148‑1 (MQ=255) acacAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTaa > 2:2661828/1‑148 (MQ=255) cacaATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAAc > 2:2045307/1‑148 (MQ=255) cacaATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAAc < 1:3047801/148‑1 (MQ=255) cacaATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAAc < 1:3047774/148‑1 (MQ=255) ttGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTg < 2:1355899/148‑1 (MQ=255) ccTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTg < 2:1986332/148‑1 (MQ=255) | AACTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTG‑TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTG > CP009273/1385863‑1386152 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |