Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 1,537,806 A→T 100% L171* (TTA→TAA)  narU ← nitrate/nitrite transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,537,8060AT100.0% 870.6 / ‑6.7 263L171* (TTA→TAA) narUnitrate/nitrite transporter
Reads supporting (aligned to +/- strand):  ref base A (0/1);  major base T (124/137);  minor base G (0/1);  total (124/139)
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 263 total aligned reads displayed.

CGGTACCCAAATCCATGCGGCATTCGCCAGCGACATCACCGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGAT  >  CP009273/1537661‑1537950
                                                                                                                                                 |                                                                                                                                                
cGGTACCCAAATCCATGCGGCATTCGCCAGCGACATCACCGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTAt                                                                                                                                                <  1:565233/148‑1 (MQ=255)
      ccAACTCCAGGCGGCATTCGCCAGCGACATCACCGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCa                                                                                                                                          <  2:3144693/148‑1 (MQ=255)
          aTCCATGCGGCATTCGCCAGCGACATCACCGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTaa                                                                                                                                      >  1:66971/1‑148 (MQ=255)
           tCCATGCGGCATTCGCCAGCGACATCACCGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAAt                                                                                                                                     >  2:2250054/1‑148 (MQ=255)
               tGCGGCATTCGCCAGCGACATCACCGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCa                                                                                                                                 <  1:2682263/148‑1 (MQ=255)
                gCGGCATTCGCCAGCGACATCACCGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCaa                                                                                                                                <  2:2555033/148‑1 (MQ=255)
                     aTTCGCCAGCGACATCACCGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAgcg                                                                                                                           <  2:138307/148‑1 (MQ=255)
                         gCCAGCGACATCACCGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTcc                                                                                                                       <  2:2513187/148‑1 (MQ=255)
                          ccAGCGACATCACCGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTccc                                                                                                                      <  1:1052236/148‑1 (MQ=255)
                          ccAGCGACATCACCGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTccc                                                                                                                      <  1:2545161/148‑1 (MQ=255)
                             gCGACATCACCGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTg                                                                                                                   <  1:1769343/148‑1 (MQ=255)
                              cGACATCACCGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGt                                                                                                                  >  2:3287808/1‑148 (MQ=255)
                               gACATCACCGAACCGTCGTCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTTCAACCAGCTGCATTACACTTACACCTAATTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCACTTGtt                                                                                                                 <  1:3196128/148‑1 (MQ=255)
                               gACATCACCGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGtt                                                                                                                 <  2:1057895/148‑1 (MQ=255)
                                  aTCACCGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCCGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTgg                                                                                                              <  2:3435860/148‑1 (MQ=255)
                                    cACCGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCt                                                                                                            <  2:1787549/148‑1 (MQ=255)
                                    cACCGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCt                                                                                                            <  2:2975724/148‑1 (MQ=255)
                                     aCCGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCtt                                                                                                           >  2:2828872/1‑148 (MQ=255)
                                       cGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCtttt                                                                                                         <  2:84054/148‑1 (MQ=255)
                                          aCCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGa                                                                                                      >  1:2059720/1‑148 (MQ=255)
                                             gTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAaag                                                                                                   <  1:3384261/148‑1 (MQ=255)
                                              tCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAaaga                                                                                                  <  1:2660562/148‑1 (MQ=255)
                                               cGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAaagaa                                                                                                 >  1:2372867/1‑148 (MQ=255)
                                                ggCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAaagaag                                                                                                <  2:115221/148‑1 (MQ=255)
                                                 gCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAagaaga                                                                                               <  2:3063372/148‑1 (MQ=255)
                                                  ccTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAgaagaa                                                                                              <  2:2169660/148‑1 (MQ=255)
                                                   cTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGaaa                                                                                             <  1:156731/148‑1 (MQ=255)
                                                    tGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAAc                                                                                            >  2:3158061/1‑148 (MQ=255)
                                                     gCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACt                                                                                           >  1:715988/1‑148 (MQ=255)
                                                        gTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGat                                                                                        <  2:2947319/148‑1 (MQ=255)
                                                          aCGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGatat                                                                                      <  1:2433927/148‑1 (MQ=255)
                                                          aCGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGatat                                                                                      <  1:2840856/148‑1 (MQ=255)
                                                          aCGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGatat                                                                                      <  2:1328262/148‑1 (MQ=255)
                                                          aCGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGatat                                                                                      <  1:1088914/148‑1 (MQ=255)
                                                          aCGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGatat                                                                                      <  2:3465199/148‑1 (MQ=255)
                                                             ccATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGc                                                                                   <  2:1532129/148‑1 (MQ=255)
                                                               aTTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGccc                                                                                 <  2:120828/148‑1 (MQ=255)
                                                                 tGACGCCGAGAAGGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCAt                                                                               >  1:1142220/1‑148 (MQ=255)
                                                                       cGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGa                                                                         <  2:2372867/148‑1 (MQ=255)
                                                                          gaAAGGCAAATACATGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTCTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGc                                                                      >  2:788299/1‑148 (MQ=255)
                                                                          gaAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGc                                                                      >  1:2233466/1‑148 (MQ=255)
                                                                          gaAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGc                                                                      >  1:1016838/1‑148 (MQ=255)
                                                                              ggCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCGATTTATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCTAAGCAAAg                                                                  <  2:777797/148‑1 (MQ=255)
                                                                                 aaaTACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGtct                                                               >  2:2787828/1‑146 (MQ=255)
                                                                                  aaTACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTg                                                              >  1:363574/1‑148 (MQ=255)
                                                                                   aTACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGc                                                             <  2:2618870/148‑1 (MQ=255)
                                                                                    tACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCa                                                            <  1:1692925/148‑1 (MQ=255)
                                                                                    tACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCa                                                            <  2:2228890/148‑1 (MQ=255)
                                                                                     aCAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCAc                                                           <  1:1098197/148‑1 (MQ=255)
                                                                                     aCAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCAc                                                           >  2:1883942/1‑148 (MQ=255)
                                                                                        ggTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTg                                                        <  2:607926/148‑1 (MQ=255)
                                                                                        ggTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTg                                                        >  1:1978482/1‑148 (MQ=255)
                                                                                         gTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCCAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGc                                                       >  1:1229815/1‑148 (MQ=255)
                                                                                         gTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGc                                                       >  2:817799/1‑148 (MQ=255)
                                                                                             aaaaaTGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCaaaa                                                   <  2:375117/148‑1 (MQ=255)
                                                                                             aaaaaTGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCaaaa                                                   >  2:2051898/1‑148 (MQ=255)
                                                                                             aaaaaTGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCaaaa                                                   >  2:186564/1‑148 (MQ=255)
                                                                                                aaTGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCg                                                >  1:1495679/1‑148 (MQ=255)
                                                                                                 aTGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGc                                               <  1:387205/148‑1 (MQ=255)
                                                                                                 aTGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGc                                               <  2:1754344/148‑1 (MQ=255)
                                                                                                   gACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCAt                                             <  1:576878/148‑1 (MQ=255)
                                                                                                    aCCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATa                                            >  1:233456/1‑148 (MQ=255)
                                                                                                    aCCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATa                                            >  2:2346393/1‑148 (MQ=255)
                                                                                                         cGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCaaa                                       <  2:1322308/148‑1 (MQ=255)
                                                                                                            tGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGcg                                    <  2:3048579/148‑1 (MQ=255)
                                                                                                             gCAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGcga                                   <  1:838468/148‑1 (MQ=255)
                                                                                                              cAACCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGcgat                                  >  1:982154/1‑148 (MQ=255)
                                                                                                               aaCCAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGcgata                                 <  1:3265240/148‑1 (MQ=255)
                                                                                                                 ccAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGcgataac                               >  1:1910409/1‑148 (MQ=255)
                                                                                                                  cAGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGcgataacg                              <  1:2906229/148‑1 (MQ=255)
                                                                                                                  cAGCTGCATTACACTTACACCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGcgataacg                              <  1:633999/148‑1 (MQ=255)
                                                                                                                   aGCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGcgataacga                             >  1:2276131/1‑148 (MQ=255)
                                                                                                                    gCTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGcgataacgat                            >  1:3037552/1‑148 (MQ=255)
                                                                                                                     cTGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGcgataacgata                           >  1:1956603/1‑148 (MQ=255)
                                                                                                                      tGCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGcgataacgataa                          <  1:1841183/148‑1 (MQ=255)
                                                                                                                       gCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATaaa                         >  2:882554/1‑148 (MQ=255)
                                                                                                                       gCATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATaaa                         >  1:2120589/1‑148 (MQ=255)
                                                                                                                        cATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAat                        >  2:3502699/1‑148 (MQ=255)
                                                                                                                        cATTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAat                        <  2:1276692/148‑1 (MQ=255)
                                                                                                                         aTTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAata                       >  1:1340465/1‑148 (MQ=255)
                                                                                                                         aTTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAata                       <  1:1291842/148‑1 (MQ=255)
                                                                                                                         aTTACACTTACACCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTCTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAata                       <  1:788299/148‑1 (MQ=255)
                                                                                                                          ttacacttacacCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAatat                      >  2:3131442/1‑148 (MQ=255)
                                                                                                                            acacttacacCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAATATcc                    >  1:2284016/1‑148 (MQ=255)
                                                                                                                               cttacacCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCaa                 >  1:701288/1‑148 (MQ=255)
                                                                                                                                ttacacCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCaaa                >  1:42665/1‑148 (MQ=255)
                                                                                                                                  acacCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAg              <  2:2184022/148‑1 (MQ=255)
                                                                                                                                  acacCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCACATGCTCGAAGCAAAGTTTGCACATGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCaaaat              >  1:3357460/1‑147 (MQ=255)
                                                                                                                                   cacCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGcgata                                 <  2:2003177/128‑1 (MQ=255)
                                                                                                                                    acCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGa            <  1:892121/148‑1 (MQ=255)
                                                                                                                                    acCTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGa            >  2:1929126/1‑148 (MQ=255)
                                                                                                                                      cTAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGt          >  1:1118838/1‑148 (MQ=255)
                                                                                                                                       tAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTa         <  2:57915/148‑1 (MQ=255)
                                                                                                                                       tAAGTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTa         <  1:759001/148‑1 (MQ=255)
                                                                                                                                          gTTTCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTc      >  1:516578/1‑148 (MQ=255)
                                                                                                                                            ttCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATTCTCGAAGCAAAGATTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAATGAGTATTCgg    >  1:3195074/1‑148 (MQ=255)
                                                                                                                                            ttCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCgg    <  2:2257849/148‑1 (MQ=255)
                                                                                                                                            ttCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCgg    <  2:700529/148‑1 (MQ=255)
                                                                                                                                            ttCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCgg    >  1:1564226/1‑148 (MQ=255)
                                                                                                                                             tCCTTATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGa   <  2:941028/148‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                
CGGTACCCAAATCCATGCGGCATTCGCCAGCGACATCACCGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTACAAAAATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGAT  >  CP009273/1537661‑1537950

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑