| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 165,759 | G→T | 93.4% | E597* (GAG→TAG) | fhuA → | ferrichrome outer membrane transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 165,759 | 0 | G | T | 93.4% | 612.7 / 28.8 | 223 | E597* (GAG→TAG) | fhuA | ferrichrome outer membrane transporter |
| Reads supporting (aligned to +/- strand): ref base G (10/6); new base T (112/95); total (122/101) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 229 total aligned reads displayed.
CCGTCTAAAGGTAAGCAGTATGAAGTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCGAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACA > CP009273/165612‑165904 | tCTAAAGGTAAGCAGTATGAAGTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCtaga < 1:839336/148‑1 (MQ=255) tCTAAAGGTAAGCAGTATGAAGTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCgaga > 1:2456005/1‑148 (MQ=255) tCTAAAGGTAAGCAGTATGAAGTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCATCTTCTCGGTTGAAGGTGGCgaga > 1:2646523/1‑148 (MQ=255) tAAAGGTAAGCAGTATGAAGTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACACTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATc < 1:2024688/148‑1 (MQ=255) aaaGGTAAGCAGTATGAAGTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATcc > 1:1519315/1‑148 (MQ=255) aaaGGTAAGCAGTATGAAGTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATcc > 2:1812567/1‑148 (MQ=255) aaGGTAAGCAGTATGAAGTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCcg > 2:2881888/1‑148 (MQ=255) aaGCAGTATGAAGTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCAc > 2:1235738/1‑148 (MQ=255) aGCAGTATGAAGTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACg < 2:2204690/148‑1 (MQ=255) gCAGTATGAAGTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGt > 1:3057528/1‑148 (MQ=255) gCAGTATGAAGTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGt < 1:1329931/148‑1 (MQ=255) cAGTATGAAGTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGACGGTGGCTAGATCCGCGCACGTg > 2:1157027/1‑148 (MQ=255) cAGTATGAAGTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTg < 1:852240/148‑1 (MQ=255) gTATGAAGTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGc > 1:278261/1‑148 (MQ=255) gTATGAAGTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCGAGATCCGCGCACGTGGc > 2:1007505/1‑148 (MQ=255) tATGAAGTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCg > 2:1040333/1‑148 (MQ=255) tATGAAGTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCGAGATCCGCGCACGTGGCg > 2:1039755/1‑148 (MQ=255) gTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGaaa > 1:558670/1‑148 (MQ=255) gTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGaaa > 1:1985479/1‑148 (MQ=255) tCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAAt < 2:3436073/148‑1 (MQ=255) aaTATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGaa > 2:3362349/1‑148 (MQ=255) atatGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGaaa > 1:3259754/1‑148 (MQ=255) tatGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCGAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAg < 2:504526/148‑1 (MQ=255) atGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAgc < 1:422310/148‑1 (MQ=255) atGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAgc > 1:407445/1‑148 (MQ=255) tGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAgcg > 2:2622662/1‑148 (MQ=255) tGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAgcg < 1:492930/148‑1 (MQ=255) tGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAgcg < 1:1127373/148‑1 (MQ=255) tCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCg < 2:2255362/148‑1 (MQ=255) gTCCTATTGTAGTTCCTGGTGCCGTGTATAATCTCCCTAAAACCAACAACCTGTTGGCGGACCCTGAGGGTTCCTTCTTCTGGGTTGAAGGTGGCTAGATCCGCGCCCGTGGCGTACAAATCGACGCCAAAGCGGCGCTGTCGGCGAg < 1:185798/148‑1 (MQ=255) tCCGATTGTAGATACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAgt > 2:3115031/1‑148 (MQ=255) ccGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAgtg > 1:468520/1‑148 (MQ=255) ccGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCGAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAgtg > 2:1206613/1‑148 (MQ=255) gATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGtt > 1:1433243/1‑148 (MQ=255) ttGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTaa > 1:3222525/1‑148 (MQ=255) tGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAAc > 1:2540687/1‑148 (MQ=255) tGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAAc > 1:779166/1‑148 (MQ=255) tAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGt < 2:278225/148‑1 (MQ=255) ttACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCTAGTGTTAACGTAGt > 2:262222/1‑148 (MQ=255) aCTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCg > 2:2413709/1‑148 (MQ=255) gtGGTGCCGTGTATAATCTCAATAAACCCAACACCCTGAGGGCGGACCCTGTGGGTTCCTTCTTCTCGGTTGATGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCgg < 1:740754/147‑1 (MQ=255) cTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCgg < 2:2831012/148‑1 (MQ=255) gTGCCGTGTATAATCTCAGTAAAACCATCAACCTGTTGGCTGACCATTTGGGTTCGTTCTTATCGTTTGAAGTTTGATAGATCGGCGAACGTGGGTTAGTTACCGAAGCGAACGCGGCGCTGTCGGCGAGTGTTATCGTTGTCGGTTc < 2:1439832/148‑1 (MQ=255) gTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCGAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTc > 2:1979395/1‑148 (MQ=255) tGCCTTTTATAATCTCCCTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTGGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTATAAATCGACGCCAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCt < 1:194662/148‑1 (MQ=255) gCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCtt < 2:2035104/148‑1 (MQ=255) cGTGTATAATCTCACTAAAACCAACACCCTGATGGCGGACCCTTAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGTTCCGCGCAAGTGGCGTAGAATTGGAAGGGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTtattat < 2:2340919/148‑1 (MQ=255) cGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTtat < 2:1805587/148‑1 (MQ=255) gtgtATAATCTCACTAAAACCAACACCCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTtata < 1:1995085/148‑1 (MQ=255) gtgtATAATCTCAATAAACCCAACAACCGGAGGGCGGACCCTGAGGGTTCCTTCTTCTGGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTACAAATCGAAGCGAACGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTtata < 1:2502835/148‑1 (MQ=255) gtATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACt > 1:2105707/1‑148 (MQ=255) tataATCTCACTAAAACCAACAACCTGAGGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACtt < 2:1243189/148‑1 (MQ=255) aaTCTCCCTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTaca < 1:585490/148‑1 (MQ=255) aaTCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTaca > 1:2059492/1‑148 (MQ=255) aaTCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTaca > 1:1565113/1‑148 (MQ=255) tctcACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACAcc > 1:3162270/1‑148 (MQ=255) tcACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGa < 2:3308477/148‑1 (MQ=255) cACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGAt > 1:218570/1‑148 (MQ=255) cACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGAt > 1:2999134/1‑148 (MQ=255) aCTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATg > 2:1178122/1‑148 (MQ=255) aCTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATg > 2:2929087/1‑148 (MQ=255) cTAAAACCAACACCCTGAGGGCGGACCCGGCGGGTTCCTTCTTCTCGGTTGACGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGACGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGc < 1:2814924/148‑1 (MQ=255) aaaCCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGa > 2:2988523/1‑148 (MQ=255) aacaccCTGTGGGCGGACCGTGTGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGAGCCGCGCACGTGGCTTATAAATCGAAGCCAACGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATaca < 1:2967148/148‑1 (MQ=255) caacCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATAcacc > 1:1413846/1‑148 (MQ=255) aacCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATAcacca < 2:2999834/148‑1 (MQ=255) tGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGa < 2:960770/148‑1 (MQ=255) gATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGAt > 1:87597/1‑148 (MQ=255) gATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGAt > 1:2282511/1‑148 (MQ=255) gATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCGAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGAt > 2:1078809/1‑148 (MQ=255) tGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGAtac > 1:3176582/1‑148 (MQ=255) gCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGAtacta > 1:2779046/1‑148 (MQ=255) gCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGAtacta > 1:1025747/1‑148 (MQ=255) gCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGAtacta > 2:2768729/1‑148 (MQ=255) gACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCt > 2:2117574/1‑148 (MQ=255) gACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCt < 1:381901/148‑1 (MQ=255) cccTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCtat > 1:666704/1‑148 (MQ=255) cTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATaa > 1:3409917/1‑148 (MQ=255) tgtgggTTCCTTCTTCTCGTTTGATGGTGGCTAGATCCGCGCACTTGGCTTAGAATTCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATaaa < 1:3177577/145‑1 (MQ=255) tGAGGTTACATTTTTCTCGTTTGATGGTGGCTACATCCGCGCAGGTGGCGTATAATTCGACGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATaaa < 1:440041/148‑1 (MQ=255) tGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATaaa < 2:2958253/148‑1 (MQ=255) aGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAgg > 2:3335997/1‑148 (MQ=255) aGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAgg > 2:2891752/1‑148 (MQ=255) aGGGTTCCTTCTTCTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAgg > 2:1594689/1‑148 (MQ=255) gTTCCTTCTTCTCGGTTGAAGGTGGATAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCaa < 1:2506116/148‑1 (MQ=255) gTTCCTTATTCTCGTTTTATGGTGGCTAGAGCCGCGCAGGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCaa < 1:2388304/148‑1 (MQ=255) ttcttcTCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGc < 2:427711/148‑1 (MQ=255) ttctCGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTg < 2:2385203/148‑1 (MQ=255) tctcGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATAAGCCTGc > 2:712848/1‑148 (MQ=255) ctcGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGAGTTAACGTAGTCGGTTCTTATACATACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGca > 2:863204/1‑148 (MQ=255) ggtttGATGGGGGCTATATCCGCGCAGTTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGcaca < 1:1812567/145‑1 (MQ=255) cGGTTGAAGGTGGCTAGATCCGCGCACGTGGCGTATAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGcaca < 1:3041389/148‑1 (MQ=255) ttGAAGGTGGCTATATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGt < 2:643276/148‑1 (MQ=255) ttGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCGGCACAGGt > 2:1848890/1‑148 (MQ=255) tGAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTg > 1:1747454/1‑148 (MQ=255) gAAGGTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGc < 2:2075889/148‑1 (MQ=255) ggTGGCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCaa > 2:1968217/1‑148 (MQ=255) ggCTAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAac < 1:182966/148‑1 (MQ=255) gCGAGATCCGCGCTCGTGGCGTAGAAATCGACGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAaca < 2:2646523/148‑1 (MQ=255) gCGAGATCCGCGCCCGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAaca < 2:2456005/148‑1 (MQ=255) | CCGTCTAAAGGTAAGCAGTATGAAGTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCGAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACA > CP009273/165612‑165904 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |