BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP009273	1,922,164	C→A	100%	P311P (CCG→CCT)	ptrB ←	protease II

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	1,922,164	0	C	A	100.0%	654.4 / NA	195	P311P (CCG→CCT)	ptrB	protease II
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (97/98); total (97/98)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 199 total aligned reads displayed.

GGCCGGATCATCAAAGGCAATACCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGCGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAA  >  CP009273/1922020‑1922308

ggCCGGATCATCAAAGGCAATACCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTggagga                                                                                                                                               <  1:1464217/148‑1 (MQ=255)

ggCCGGATCATCAAAGGCAATACCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTggagga                                                                                                                                               <  2:3237407/148‑1 (MQ=255)

ggCCGGATCATCAAAGGCAATACCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTggagga                                                                                                                                               >  1:1363716/1‑148 (MQ=255)

 gCCGGATCATCAAAGGCAATACCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGaa                                                                                                                                              <  1:1973914/148‑1 (MQ=255)

 gCCGGATCATCAAAGGCAATACCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGaa                                                                                                                                              <  2:425334/148‑1 (MQ=255)

  ccGGATCATCAAAGGCAATACCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAAt                                                                                                                                             <  1:156233/148‑1 (MQ=255)

    ggATCATCAAAGGCAATACCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTa                                                                                                                                           <  2:1110682/148‑1 (MQ=255)

     gATCATCAAAGGCAATACCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTaa                                                                                                                                          <  1:3175590/148‑1 (MQ=255)

          tcaAAGGCAATACCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCtt                                                                                                                                     >  2:662930/1‑148 (MQ=255)

                gCAATACCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACt                                                                                                                               >  1:747920/1‑148 (MQ=255)

                gCAATACCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACt                                                                                                                               >  2:3197183/1‑148 (MQ=255)

                    tACCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTg                                                                                                                           >  1:857149/1‑148 (MQ=255)

                    tACCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTg                                                                                                                           >  1:3510494/1‑148 (MQ=255)

                    tACCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTg                                                                                                                           >  2:2172791/1‑148 (MQ=255)

                    tACCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTg                                                                                                                           >  1:2615096/1‑148 (MQ=255)

                     aCCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGc                                                                                                                          >  1:231130/1‑148 (MQ=255)

                     aCCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGc                                                                                                                          >  1:1034548/1‑148 (MQ=255)

                     aCCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGc                                                                                                                          >  1:1034546/1‑148 (MQ=255)

                      ccAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCt                                                                                                                         <  1:3406032/148‑1 (MQ=255)

                       cAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCtc                                                                                                                        >  1:969446/1‑148 (MQ=255)

                           gACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCtcatca                                                                                                                    <  2:3258837/148‑1 (MQ=255)

                              ttCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGc                                                                                                                 >  2:1974165/1‑148 (MQ=255)

                               tCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCa                                                                                                                <  2:1104932/148‑1 (MQ=255)

                               tCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCa                                                                                                                >  1:1742668/1‑148 (MQ=255)

                                cccGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCAt                                                                                                               >  2:1532926/1‑148 (MQ=255)

                                cccGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCAt                                                                                                               >  2:902209/1‑148 (MQ=255)

                                cccGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCAt                                                                                                               <  1:626062/148‑1 (MQ=255)

                                cccGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCAt                                                                                                               >  1:2719929/1‑148 (MQ=255)

                                  cGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATAc                                                                                                             <  2:3143053/148‑1 (MQ=255)

                                   gggTCGTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGGCGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACg                                                                                                            <  1:918878/148‑1 (MQ=255)

                                    ggTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACgg                                                                                                           >  2:817040/1‑148 (MQ=255)

                                    ggTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACgg                                                                                                           >  2:485624/1‑148 (MQ=255)

                                    ggTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACgg                                                                                                           <  1:2341729/148‑1 (MQ=255)

                                       cTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTa                                                                                                        >  1:2919818/1‑148 (MQ=255)

                                       cTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTa                                                                                                        <  2:3482499/148‑1 (MQ=255)

                                       cTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTa                                                                                                        >  2:757983/1‑148 (MQ=255)

                                         tGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACg                                                                                                      >  1:980434/1‑148 (MQ=255)

                                           cGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGt                                                                                                    <  1:1492553/148‑1 (MQ=255)

                                           cGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGt                                                                                                    <  1:2753972/148‑1 (MQ=255)

                                           cGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGt                                                                                                    <  1:137083/148‑1 (MQ=255)

                                           cGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGt                                                                                                    >  2:913891/1‑148 (MQ=255)

                                            ggTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGta                                                                                                   <  1:3111199/148‑1 (MQ=255)

                                                aaTTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAg                                                                                               <  1:2795648/148‑1 (MQ=255)

                                                 aTTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGc                                                                                              <  2:1568498/148‑1 (MQ=255)

                                                 aTTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGc                                                                                              <  2:271600/148‑1 (MQ=255)

                                                   ttGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCa                                                                                            >  2:293650/1‑148 (MQ=255)

                                                       cgcAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGt                                                                                        <  1:2224535/148‑1 (MQ=255)

                                                         cAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGttt                                                                                      >  1:2456764/1‑148 (MQ=255)

                                                            aCTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTg                                                                                   >  2:1449856/1‑148 (MQ=255)

                                                               ggTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCg                                                                                >  1:737026/1‑148 (MQ=255)

                                                                    aCCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCg                                                                           >  1:765733/1‑148 (MQ=255)

                                                                     cccGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCgg                                                                          >  1:825620/1‑148 (MQ=255)

                                                                     cccGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCgg                                                                          <  1:1284001/148‑1 (MQ=255)

                                                                     cccGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCgg                                                                          >  1:2857902/1‑148 (MQ=255)

                                                                      ccGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGt                                                                         <  1:2665172/148‑1 (MQ=255)

                                                                            tGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAAc                                                                   >  2:2601848/1‑148 (MQ=255)

                                                                              aCGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGc                                                                 <  1:1336543/148‑1 (MQ=255)

                                                                              aCGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGc                                                                 >  1:1677503/1‑148 (MQ=255)

                                                                                gCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAg                                                               <  2:985629/148‑1 (MQ=255)

                                                                                gCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAg                                                               <  2:431461/148‑1 (MQ=255)

                                                                                   ctTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATa                                                            >  2:1959969/1‑148 (MQ=255)

                                                                                    ttCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATaa                                                           >  1:931021/1‑148 (MQ=255)

                                                                                      cAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATaaaa                                                         <  2:2456764/148‑1 (MQ=255)

                                                                                        accaccAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAAc                                                       >  1:3044307/1‑148 (MQ=255)

                                                                                         ccaccaGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACg                                                      <  1:390060/148‑1 (MQ=255)

                                                                                            ccagccagTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATg                                                   >  1:3187375/1‑148 (MQ=255)

                                                                                             cagccagTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGc                                                  >  1:816004/1‑148 (MQ=255)

                                                                                               gccagTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTg                                                <  2:2909491/148‑1 (MQ=255)

                                                                                                 cagTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGt                                              <  2:3120114/148‑1 (MQ=255)

                                                                                                   gTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAg                                            <  2:816004/148‑1 (MQ=255)

                                                                                                       gTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGAt                                        >  1:239888/1‑148 (MQ=255)

                                                                                                        tAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATc                                       <  2:1966885/148‑1 (MQ=255)

                                                                                                         aaaCAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCa                                      <  1:2562394/148‑1 (MQ=255)

                                                                                                          aaCAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCaa                                     >  1:1255091/1‑148 (MQ=255)

                                                                                                          aaCAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCaa                                     <  2:2615096/148‑1 (MQ=255)

                                                                                                           aCAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAg                                    >  1:588515/1‑148 (MQ=255)

                                                                                                            cAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTTGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAgg                                   <  2:2781143/148‑1 (MQ=255)

                                                                                                            cAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAgg                                   >  2:2099492/1‑148 (MQ=255)

                                                                                                                 tAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTa                              <  2:1592940/148‑1 (MQ=255)

                                                                                                                 tAAACCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTa                              >  2:165313/1‑148 (MQ=255)

                                                                                                                  aaaCCCTTCCCGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAATGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTAt                             <  1:437709/148‑1 (MQ=255)

                                                                                                                  aaaCCCTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTAt                             <  1:243658/148‑1 (MQ=255)

                                                                                                                      ccTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGt                         >  1:3337369/1‑148 (MQ=255)

                                                                                                                       cTTCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTg                        <  2:2857899/148‑1 (MQ=255)

                                                                                                                        ttCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGa                       <  1:662930/148‑1 (MQ=255)

                                                                                                                        ttCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGa                       >  1:2257481/1‑148 (MQ=255)

                                                                                                                         tCCAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGAt                      <  1:485624/148‑1 (MQ=255)

                                                                                                                          ccAGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATc                     <  1:629289/148‑1 (MQ=255)

                                                                                                                            aGCATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCtt                   >  2:118503/1‑148 (MQ=255)

                                                                                                                              cATGATGTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTg                 >  1:3196686/1‑148 (MQ=255)

                                                                                                                               atgatgTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTgc                <  2:3404105/148‑1 (MQ=255)

                                                                                                                                tgatgTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTgcg               >  1:2516243/1‑148 (MQ=255)

                                                                                                                                 gatgTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTgcgg              >  2:1799300/1‑148 (MQ=255)

                                                                                                                                 gatgTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTgcgg              >  1:1118808/1‑148 (MQ=255)

                                                                                                                                    gTTTTCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTgcggcgc           >  2:1773591/1‑148 (MQ=255)

                                                                                                                                     ttttCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTgcggcgcg          >  1:2128782/1‑148 (MQ=255)

                                                                                                                                     ttttCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGCACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTgcggcgcg          >  2:3498726/1‑148 (MQ=255)

                                                                                                                                      tttCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTgcggcgcgg         <  1:2438834/148‑1 (MQ=255)

                                                                                                                                       ttCGCGTGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTgcggcgcggc        <  2:2340683/148‑1 (MQ=255)

                                                                                                                                             tGGAGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGaaaa  <  1:1800065/148‑1 (MQ=255)

GGCCGGATCATCAAAGGCAATACCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAAACTGGTTAACCCGCGCTGACGCTCTTCAACCACCAGCCAGTCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGCGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAA  >  CP009273/1922020‑1922308

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`