| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,004,533 | G→T | 100% | T151T (ACG→ACT) | yedL → | putative acyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,004,533 | 0 | G | T | 100.0% | 384.1 / ‑6.7 | 151 | T151T (ACG→ACT) | yedL | putative acyl transferase |
| Reads supporting (aligned to +/- strand): ref base G (2/1); major base T (71/73); minor base A (4/0); total (77/74) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 153 total aligned reads displayed.
GATGCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACGCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAGT > CP009273/2004388‑2004676 | gATGCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGActct < 1:2148268/148‑1 (MQ=255) gCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATg < 2:849342/148‑1 (MQ=255) ttCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGa > 2:1587500/1‑148 (MQ=255) cATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACGGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGaaa < 2:1235200/148‑1 (MQ=255) aTCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGaaaa < 1:1713759/148‑1 (MQ=255) aTCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGaaaa < 1:1713829/148‑1 (MQ=255) gCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAaataa < 2:88572/148‑1 (MQ=255) cTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACGCTATGCGAAAATAA‑Tg < 2:816009/148‑1 (MQ=255) gAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTAAATTAATCTATTCGAAAATAA‑Tgta > 1:48628/1‑146 (MQ=255) gAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTTAATCTATTCGAAaataaataa > 1:1724123/1‑144 (MQ=255) gAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTATTATAATTGAATATATTCGAAAAAAA‑AGaa > 2:3178265/1‑148 (MQ=255) aGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAAt < 1:2224537/148‑1 (MQ=255) aGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAAt < 1:2224872/148‑1 (MQ=255) aGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAAt < 2:2370907/148‑1 (MQ=255) gCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTAATTTACTATATTCGAAAATAA‑TGAAtt > 1:1927585/1‑148 (MQ=255) ttAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTCATTTTCTATAATGGAAAAAAA‑TGAAtttg > 1:1316784/1‑146 (MQ=255) ttAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTGACTATATTCGGAAATaa‑ttaatttg > 1:1316923/1‑146 (MQ=255) tAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCGATGCGAAAATAA‑TGAATTTcc > 1:1139670/1‑148 (MQ=255) aaaCGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTAATTTACTCTATTCGAAAATAA‑TGAATTTCCATg > 1:2303651/1‑148 (MQ=255) aaaCGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATg < 1:742246/148‑1 (MQ=255) aaaCGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTGACTCTATGCGTAAATAA‑TGAATTGGCATg > 1:851094/1‑148 (MQ=255) aCGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACGCTATTGGAAAAAAA‑TGTCTTGCACTGAg > 2:1892231/1‑148 (MQ=255) aCGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGAGTTTTATAATTTTCTCTATGGGAAAATAA‑TTAATTTCCATGAg > 1:1357630/1‑148 (MQ=255) aCGGGTACACAGGCTGGATTTACGGCCTGCCATCAACATTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAg < 1:768857/148‑1 (MQ=255) cGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGc < 2:2892115/148‑1 (MQ=255) cGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTGTCTCTATGAGAAAATAA‑TGAATTTCCATGAGc > 2:3186831/1‑148 (MQ=255) gTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAg < 1:3224619/148‑1 (MQ=255) acacAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTAATTTAATCTAATCGAAAATAA‑TTAATTGTCAGGTGCCAGaa > 1:3324937/1‑147 (MQ=255) cacaGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTCATTTTCTCTATGGGAAAAAAA‑TTAATTTACATGTGCCCGACg > 1:2802292/1‑148 (MQ=255) acaGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACgc < 1:2424002/148‑1 (MQ=255) acaGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACgc < 1:661483/148‑1 (MQ=255) ggCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGAATCTATGCGAAAATAA‑TGAATTTCCATGAGCCAGACgcagc > 2:1056140/1‑148 (MQ=255) cTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTTAATATATGCGAAAATAA‑TGAATTTCCATGAGCCAGACGCAGcac > 2:2228258/1‑148 (MQ=255) tGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTTACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGcaca > 2:770376/1‑148 (MQ=255) tGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGTCTCTATGCGCAAATAA‑AGAATTTCCATTAGCCAGACgcagcaaa > 2:2955496/1‑146 (MQ=255) gATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTTACTCAATTCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGcacaat > 2:3475421/1‑146 (MQ=255) aTTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTc < 1:1501570/148‑1 (MQ=255) aCGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTGACTCTATGCGAAAATAA‑TGAATTTGCATGAGCCAGACCGAGCACATTCtttc > 2:1319715/1‑146 (MQ=255) cGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAAATTAATATATGCGAAAATAA‑TTAATTTCCAAGAGCCCGACGCAGCACAATATTgaa > 2:2075931/1‑146 (MQ=255) aggCCTGCCATCAACTTTATTTGAAGCATTGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACATGATCCACACAGTCGATTTTTATAAAAGACAACATGACAAAAAAA‑TTAATTTCCAATATCCAGAACCAGCACAGTCtttga > 2:2686893/2‑145 (MQ=255) ggCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCAt < 1:57281/148‑1 (MQ=255) cATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTCATTTAATCAATGCGAAAATAA‑TTAATTTCCAATAGCCACACGCAGCAAAATATTTCATTAGACGt > 2:1262684/1‑148 (MQ=255) aTCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGtg < 1:3353745/148‑1 (MQ=255) aTCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGtg < 1:3353928/148‑1 (MQ=255) tCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGAGTTTTTTTATTGAATCAATTCGAAAATAATTAAATTGCCA‑GAACCACACCCCGCACAATCTTTGAATAGACGtgc > 1:1873839/1‑148 (MQ=255) cTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTTTATATATTGGGAAAAAA‑TTAATTTGCAATAGCCAGACGCCCCACAATATTTAATTAGACCTGCTgcg > 1:1292668/1‑148 (MQ=255) tttATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTgcgc < 2:1509866/148‑1 (MQ=255) ttATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTAATTTTATAGATGCGCAAATAA‑ATAATTTACATGTGCCAGACGCACCACATAAATTCATTCGACGTGCTGGGcc > 1:2138676/1‑148 (MQ=255) ttATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAAATTAATCTATGCGAAAATAA‑ATAATTTGCCTGAGCCAGACCCAGCACAATCTTGGATTCGACGTGCTGCGcc > 1:3161498/1‑148 (MQ=255) tGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCtttat < 1:800707/148‑1 (MQ=255) aGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCtttattta < 2:581353/148‑1 (MQ=255) gCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTTACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTttatttat > 2:3224551/1‑148 (MQ=255) gCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTttatttat < 1:2015582/148‑1 (MQ=255) aTGGTTTAGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCa < 1:2363468/148‑1 (MQ=255) aTGGTTTAGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCa < 1:2363437/148‑1 (MQ=255) tgTTTCTCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATAAcc < 2:1964324/147‑1 (MQ=255) ggTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTAATTGACAGTATGCGAAAATAA‑TGAAATTCCATTATCCAGTAGCACAACAAACTTTCATTAGACGAGCTGCACCGttatttataaac > 2:3391680/1‑144 (MQ=255) ggTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGAGTTTTATAATTGACTCGATGCGAAAATAA‑AGAAATGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCAcc > 2:3388029/1‑148 (MQ=255) gTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGAGTTTTTTAATTGACTCTTTTCGAAAATAA‑TTAATTTGCATGAGCCAGACGCACCACAATCTTTGATTAGACGTGCTTGGCCTTTATTTATAACca > 2:1506039/1‑148 (MQ=255) tttCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACcag < 1:2784528/148‑1 (MQ=255) tttCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGAGTTTTTTAATTTTATCTATTCGAAAAAAA‑ATAATTTCCAATTGCCCGACGCAGCACAAAAATTGATTAGAAGTGGGGGGCCGTTATTTATAACcag > 1:1151972/1‑148 (MQ=255) ttCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACcagc < 1:2274283/148‑1 (MQ=255) ttCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACcagc < 1:1555285/148‑1 (MQ=255) ttCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAAATTACTCAATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACAATCTTGCATTAGACGTGCTGCGCCGTTATTTATCAcacgc > 2:3420763/1‑144 (MQ=255) gCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑AGAATTGCCATGAGCCAGACGCAGCACATTATTGGATTCGACGTGCTGCGCCTTTATTTATAACCAGCAgg > 2:548060/1‑148 (MQ=255) gCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCAATTTCTCTATGCGCAAAAAA‑TTAAATGGCCTGAGCCCGACGCACCACAATCTTTCATTCGACGTGGTGCGCCGTTATTTATAAAcagcaag > 1:1983906/1‑146 (MQ=255) cTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGa < 2:1766647/148‑1 (MQ=255) tGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTTAATCTATGCGAAAATAA‑AGAATTTCCATGAGCCAGACGCAGCACATTCTTGCATTAGACGTGCTTCGCCTTTATTTATAAACACCAGGaa > 2:1594119/1‑148 (MQ=255) ttGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAAATGACTCGATTCGAAAAAAA‑AGAATTTCCAAGCGCCAGACGCACCACCATATTTCAGTCGGAGTGCTGGCCCTTTTTTTATCACAACCCGGaaaag > 2:324834/1‑146 (MQ=255) gCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTTGCATTAGCCACACGCCGCACAATATTGCAATCGACCTGCAGCGCCGTTTTTTATAACCCCCACGAAACGcc > 2:318060/1‑148 (MQ=255) gAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCtt < 1:2756331/148‑1 (MQ=255) aaCCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTg < 1:3504139/148‑1 (MQ=255) cGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTTACTCTATGCGAAAATAA‑TTAAATTCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCGTTATTTATAACCAGCAGGAAACGCCTTGTcc > 2:2261754/1‑148 (MQ=255) cGTGTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTcc < 2:3334628/148‑1 (MQ=255) gTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCa < 1:118043/148‑1 (MQ=255) ttttCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCAt < 1:251530/148‑1 (MQ=255) tATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATTA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGcccc < 1:2937788/148‑1 (MQ=255) aTCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGTATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCGTTATTTATAACCAGCAGGTAAAGCCTTGTCCAAAGACGcccca > 2:2529876/1‑147 (MQ=255) aTCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCt < 2:2465146/148‑1 (MQ=255) cGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTc < 2:456380/148‑1 (MQ=255) aCTTGATCCACACAGTCGATTTTTTTCATTGACTCTATGCGAAAATAA‑TTAATTTCCATGAGCCAGACCCAGCAAATTATTGCATTAGACGTGCTGCGCCTTTAATTATAACCAGCAGGGAAACCCTTGTACAATGACGCCCCTTCca > 2:971114/1‑148 (MQ=255) ttGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCcaca < 2:11108/148‑1 (MQ=255) ttGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCcaca < 2:8130/148‑1 (MQ=255) ttGATCCACACAGTCGATTTTTATCATTGAATCTATTCGAAAATAA‑AGAATTGCCATGAGCCAGAAGCAGCACAATCTTGCATTAGACGTGCTGCGCCTTTATTTATAACCAGCAGGAAACGCCTTGTACAAATAAGCCCCAACcaca > 2:2777332/1‑148 (MQ=255) ccccaccGTCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCAGTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATgcgc < 2:1849650/145‑1 (MQ=255) cacacaGTCGATTTTTATCAATTAAACAAAGCGCAAATAA‑TGAATTTCCAAGATCCAGACCCACCACAATATTGCAATCGACGTGCTGCGCCTTTATTTATAAACAGCCGGAAACGCCATGTCCAAAGACGCCCCGTCCACAAGCGcc > 2:2081192/1‑148 (MQ=255) tCGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTTCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAAAGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGaa > 1:2782159/1‑148 (MQ=255) cGATTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGaaa > 2:392164/1‑148 (MQ=255) aTTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAAcc > 2:146387/1‑148 (MQ=255) aTTTTTATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAAcc > 2:146383/1‑148 (MQ=255) tttttATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACct < 2:1266453/148‑1 (MQ=255) tttttATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACct < 2:2235515/148‑1 (MQ=255) tttttATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACct < 2:1265754/148‑1 (MQ=255) ttttATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAACCGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACctc < 1:332084/148‑1 (MQ=255) tttATCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACctct > 1:1330325/1‑148 (MQ=255) aTCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTAtt > 2:2376323/1‑148 (MQ=255) tCATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTc > 2:2723279/1‑148 (MQ=255) cATTGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTcc > 1:1880213/1‑148 (MQ=255) ttGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAg > 2:609869/1‑148 (MQ=255) tGACTCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAGt > 1:183439/1‑148 (MQ=255) | GATGCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACGCTATGCGAAAATAA‑TGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAGT > CP009273/2004388‑2004676 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |