| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 186,159 | A→G | 100% | intergenic (‑166/‑40) | map ← / → tff | methionine aminopeptidase/novel sRNA, function unknown |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 186,159 | 0 | A | G | 98.8% | 959.5 / ‑1.1 | 242 | intergenic (‑166/‑40) | map/tff | methionine aminopeptidase/novel sRNA, function unknown |
| Reads supporting (aligned to +/- strand): ref base A (2/1); new base G (123/114); total (125/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 253 total aligned reads displayed.
GGTGATACCGACAATATATATGTAAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAATTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGG > CP009273/186014‑186303 | ggTGATACCGACAATATATATGTAAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAgtt > 1:2429658/1‑148 (MQ=255)ggTGATACCGACAATATATATGTAAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAgtt < 1:1318054/148‑1 (MQ=255)ggTGATACCGACAATATATATGTAAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAgtt < 2:1349421/148‑1 (MQ=255) gTGATACCGACAATATATATGTAAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAgtta < 1:1478989/148‑1 (MQ=255) taacGACAATATATATGTAAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTgg < 1:294899/145‑1 (MQ=255) aCCGACAATATATATGTAAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGgt < 1:49879/148‑1 (MQ=255) cGACAATATATATGTAAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGgtgt < 2:1875119/148‑1 (MQ=255) aCAATATATATGTAAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTcc > 2:527646/1‑148 (MQ=255) cAATATATATGTAAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCa > 2:74958/1‑148 (MQ=255) cAATATATATGTAAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCa > 2:1852855/1‑148 (MQ=255) cAATATATATGTAAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCa > 2:2072560/1‑148 (MQ=255) cAATATATATGTAAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATACTGAATTTCGACAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGAGTCCa > 2:3150134/1‑148 (MQ=255) atatatatGTAAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCacg < 1:811122/148‑1 (MQ=255) tatatatGTAAGTGCCGTCAATGGTATCGCACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCacga > 2:1598875/1‑148 (MQ=255) tatatatGTAAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCacga > 1:3354756/1‑148 (MQ=255) tatatatGTAAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAAATTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACAAAGCGCCAACAATTATTGGTGTCCacga > 1:3395811/1‑148 (MQ=255) tttatGTAAGTGCCGTCAATGGTATCACACCCGGGCACATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGATGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTTGTGTCCacgacg < 1:1804941/146‑1 (MQ=255) atatGTAAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGt < 2:2482852/148‑1 (MQ=255) atatGTAAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGt > 1:3485906/1‑148 (MQ=255) atGTTAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCAATGAAGGTTTTCTATATTAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGCCGTAt < 2:2267714/148‑1 (MQ=255) atGTAAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTAt > 2:324403/1‑148 (MQ=255) tGTAAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTAtt < 1:1014153/148‑1 (MQ=255) tAAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTtg > 2:2765769/1‑148 (MQ=255) aaGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTtgt > 1:2828086/1‑148 (MQ=255) aaGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTtgt > 1:189989/1‑148 (MQ=255) gTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCTTTCGGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTgg < 2:1263041/148‑1 (MQ=255) gTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTgg > 2:1040555/1‑148 (MQ=255) gCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGta < 2:3464548/148‑1 (MQ=255) gCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGta < 2:1726260/148‑1 (MQ=255) cAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAAGTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAg < 2:2214167/148‑1 (MQ=255) aTGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAgcg > 2:487061/1‑148 (MQ=255) aTGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAgcg > 1:1933674/1‑148 (MQ=255) tGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAgcgc > 2:1712873/1‑148 (MQ=255) ggTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAgcgcg < 1:801286/148‑1 (MQ=255) acCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTCTTTGTGGTCTAAAGCGCGCCGGACtt > 2:3483041/1‑148 (MQ=255) acCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACtt > 2:337896/1‑148 (MQ=255) acCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACtt > 2:1534393/1‑148 (MQ=255) acCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACtt < 2:1803621/148‑1 (MQ=255) cccGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTc > 1:557982/1‑148 (MQ=255) ggCATATTGATAATCATTATGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATTCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATACAGCGCGCCGGACTTCCGAt < 1:271022/148‑1 (MQ=255) gCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATc < 2:2246882/148‑1 (MQ=255) cAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATcc > 1:1829572/1‑148 (MQ=255) aaTTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCAt < 2:2099316/148‑1 (MQ=255) aaTTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCAt > 1:958271/1‑148 (MQ=255) ttGAGAATCATTCTGAATTTCGTCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACTGTTTTTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCAttt < 1:1983329/148‑1 (MQ=255) tGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTc > 2:3239765/1‑148 (MQ=255) ataaTCATTGTGAATTTCGCCAATAGTGCCTCTTATGGTTTTCTATATTAGAAAATTCGACTTCTGATGCTGTACACAGCGCCAACTGTTATTTGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCAGATCCATTTCGt < 1:2076090/146‑1 (MQ=255) aaTCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGtat > 2:3148638/1‑148 (MQ=255) aTCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAATTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGtata < 1:222986/148‑1 (MQ=255) tCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATac < 1:973472/148‑1 (MQ=255) aTTATGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATacac < 1:1250402/148‑1 (MQ=255) tCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAg > 1:1279932/1‑148 (MQ=255) tCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAg > 1:2182155/1‑148 (MQ=255) tCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAg > 2:401944/1‑148 (MQ=255) cTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGa < 2:3348251/148‑1 (MQ=255) ccAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGaa > 2:1824131/1‑148 (MQ=255) aaCGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCg < 1:2968227/148‑1 (MQ=255) aCGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGa > 2:3441416/1‑148 (MQ=255) gTGCCACTGAAGTTTTTATATAATATAAAATTCGACGTCTGATGCTGTACACCGCGCCAACATTTATTGGTGTCCACGACTTTTTTGTGTTATAAAGCGCGCCGGACTTCCTATCCATTTCGTATACACAGACTGGACGGAAGCGACa < 2:1198752/148‑1 (MQ=255) gTGCCACTGAAGGTTTTATATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACa < 2:1610556/148‑1 (MQ=255) gCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCGGTACACAGCGCCACCAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAAt < 2:2725194/148‑1 (MQ=255) ccACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAAtc < 2:318245/148‑1 (MQ=255) ccACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAAtc > 2:1400347/1‑148 (MQ=255) aCTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGGTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACACtctc > 2:2082100/1‑148 (MQ=255) cTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCa < 1:2664421/148‑1 (MQ=255) cTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCa > 1:1340434/1‑148 (MQ=255) cTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCa < 1:3205053/148‑1 (MQ=255) tGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCAc > 2:71055/1‑148 (MQ=255) tGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCAc > 2:2631105/1‑148 (MQ=255) taaGGTTTTCTATAATAGAAAATTCGACGTCTGAGGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACt < 2:2966942/147‑1 (MQ=255) gAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACt < 1:2313117/148‑1 (MQ=255) ggTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTtg > 1:2563470/1‑148 (MQ=255) cTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTaac > 1:415495/1‑148 (MQ=255) ataataGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTaacaa > 2:921950/1‑148 (MQ=255) ataataGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTaacaa > 1:1167947/1‑148 (MQ=255) ataataGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTaacaa > 2:2179681/1‑148 (MQ=255) taataGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTaacaac > 1:632443/1‑148 (MQ=255) aaaaTTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAacacacac > 1:160944/1‑148 (MQ=255) aaTTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGt > 2:1938148/1‑148 (MQ=255) aaTTCGACGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGt < 2:1383687/148‑1 (MQ=255) cGTCTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGca > 2:43157/1‑148 (MQ=255) cTGATGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACat > 1:3498094/1‑148 (MQ=255) aTGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATAtt < 1:1001433/148‑1 (MQ=255) aTGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATAtt > 1:594931/1‑148 (MQ=255) tGCTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATCTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTc > 2:3404660/1‑148 (MQ=255) cTGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCg < 2:2016919/148‑1 (MQ=255) tGTACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCgg > 1:1898050/1‑148 (MQ=255) tACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCgggg > 1:2534141/1‑148 (MQ=255) tACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCgggg > 1:3161689/1‑148 (MQ=255) tACACAGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCgggg < 2:1555046/148‑1 (MQ=255) acaGCGCCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGc < 2:1339685/148‑1 (MQ=255) gcgcCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCt < 1:3239805/148‑1 (MQ=255) gcgcCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCt < 2:2855550/148‑1 (MQ=255) gcgcCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCt < 2:2699613/148‑1 (MQ=255) gcgcCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCt < 1:1101737/148‑1 (MQ=255) cgcCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCtt < 1:3309192/148‑1 (MQ=255) gcCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCttt < 1:2353536/148‑1 (MQ=255) gcCAACAGTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCttt < 1:2475220/148‑1 (MQ=255) caacagTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTgg < 2:2487774/148‑1 (MQ=255) acagTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTgggg < 1:769527/148‑1 (MQ=255) | GGTGATACCGACAATATATATGTAAGTGCCGTCAATGGTATCACACCCGGGCAAATTGAGAATCATTCTGAATTTCGCCAAACGTGCCACTGAAGGTTTTCTATAATAGAAAATTCGACGTCTGATGCTGTACACAGCGCCAACAATTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGG > CP009273/186014‑186303 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |