| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,338,233 | A→C | 93.5% | intergenic (‑585/‑111) | yfaL ← / → nrdA | adhesin/ribonucleoside‑diphosphate reductase 1, alpha subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,338,233 | 0 | A | C | 93.5% | 698.0 / 17.0 | 190 | intergenic (‑585/‑111) | yfaL/nrdA | adhesin/ribonucleoside‑diphosphate reductase 1, alpha subunit |
| Reads supporting (aligned to +/- strand): ref base A (6/7); new base C (86/91); total (92/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 190 total aligned reads displayed.
ACAGTTATTTTTAACAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTGACAAAGCGCGACG > CP009273/2338088‑2338377 | aCAGTTATTTTTAACAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGt < 1:956991/148‑1 (MQ=255) aGTTATTTTTAACAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGa < 1:820593/148‑1 (MQ=255) aGTTATTTTTAACAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGa > 2:766762/1‑148 (MQ=255) gTTATTTTTAACAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGaa > 1:2298116/1‑148 (MQ=255) ttATTTTTAACAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAAt < 2:1012603/148‑1 (MQ=255) ttttAACAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCa > 1:2696705/1‑148 (MQ=255) ttAACAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCaaa < 2:1769342/148‑1 (MQ=255) aaCAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACa < 2:1879233/148‑1 (MQ=255) cAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATa > 2:1131961/1‑148 (MQ=255) cAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATa > 1:2428987/1‑148 (MQ=255) cAAATTTCTCTCTTCCCATTGACTTTCCCGGACACCTGGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATa < 2:2502614/148‑1 (MQ=255) tttttCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATAcccc < 1:843906/148‑1 (MQ=255) tttttCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTACACACTATCTTGACGTGAATCACAAACAAAccca > 1:1104701/1‑147 (MQ=255) tctcTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCtat < 2:1619277/148‑1 (MQ=255) ctctTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCtata > 1:1088438/1‑148 (MQ=255) ctctTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCtata > 1:3162153/1‑148 (MQ=255) tctTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCtatat < 1:1146110/148‑1 (MQ=255) tctTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCtatat < 1:2732083/148‑1 (MQ=255) ctTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCtatata > 2:2807014/1‑148 (MQ=255) tCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCtatatata > 2:1427746/1‑148 (MQ=255) tCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCtatatata > 2:1427006/1‑148 (MQ=255) cATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAgtg > 2:594181/1‑148 (MQ=255) cATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAgtg < 1:2876174/148‑1 (MQ=255) cATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAgtg < 1:3024613/148‑1 (MQ=255) aTTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAgtgt > 2:81831/1‑148 (MQ=255) ttGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGtt < 1:2308149/148‑1 (MQ=255) tGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTc > 2:498634/1‑148 (MQ=255) tGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTc < 1:2463045/148‑1 (MQ=255) gACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCt < 2:993146/148‑1 (MQ=255) gACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCt > 2:3457190/1‑148 (MQ=255) aCTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATAGAGTGTTCTa < 1:1226031/148‑1 (MQ=255) cTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTaa > 1:1190862/1‑148 (MQ=255) ttCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAagc > 1:1666852/1‑148 (MQ=255) gACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTc < 1:1754355/148‑1 (MQ=255) acacCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTcc < 2:1185315/148‑1 (MQ=255) acacCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTcc > 1:2569727/1‑148 (MQ=255) acacCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTcc < 1:866236/148‑1 (MQ=255) aCCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGt < 2:1225005/148‑1 (MQ=255) aCCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGt > 1:451108/1‑148 (MQ=255) aCCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGt > 1:451187/1‑148 (MQ=255) tAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGt < 2:887685/148‑1 (MQ=255) tAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGt < 1:1073977/148‑1 (MQ=255) aaGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTc > 1:3096999/1‑148 (MQ=255) ggTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTg < 2:1136017/148‑1 (MQ=255) gTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGc < 1:1025929/148‑1 (MQ=255) tGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCa < 2:2101606/148‑1 (MQ=255) aGCCACTATTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTa < 2:2941949/148‑1 (MQ=255) gCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTAt > 1:474154/1‑148 (MQ=255) cACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAGCTATTg < 1:1577939/148‑1 (MQ=255) cACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTg > 1:945682/1‑148 (MQ=255) cACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTg > 1:1382787/1‑148 (MQ=255) aCTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTAtttc > 2:1861613/1‑146 (MQ=255) aCTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGc > 2:2076530/1‑148 (MQ=255) aCTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGc > 1:2277892/1‑148 (MQ=255) aCTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGc < 2:2328715/148‑1 (MQ=255) aCTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTGCCCGTACTACAGGTAGTCTGCATGAAACTATTGc < 2:2362635/148‑1 (MQ=255) tttttCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCgg > 1:946493/1‑148 (MQ=255) tccttcctGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAg < 2:2829609/148‑1 (MQ=255) cttcctGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGaa < 2:1003204/148‑1 (MQ=255) cttcctGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGaa < 1:3115035/148‑1 (MQ=255) cttcctGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGaa < 2:2426805/148‑1 (MQ=255) ttcctGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAAt > 2:1437424/1‑148 (MQ=255) ttcctGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAAt > 1:913780/1‑148 (MQ=255) ttcctGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAAt > 2:171861/1‑148 (MQ=255) gTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCaaaa < 1:1443680/148‑1 (MQ=255) gTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCaaaa < 1:3187750/148‑1 (MQ=255) ttATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCaaaaa < 1:1901245/148‑1 (MQ=255) tATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAAc < 1:2632956/148‑1 (MQ=255) aTCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACa < 2:642127/148‑1 (MQ=255) tCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAg < 2:2293041/148‑1 (MQ=255) tCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAg < 1:1319656/148‑1 (MQ=255) tCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAg < 1:2525445/148‑1 (MQ=255) cacaAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGt > 2:132825/1‑148 (MQ=255) aaaGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACg < 2:1156546/148‑1 (MQ=255) aaGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGa < 1:49035/148‑1 (MQ=255) aaGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGa > 1:2936760/1‑148 (MQ=255) aGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGac < 1:2705844/148‑1 (MQ=255) aTGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGacatac > 1:1394380/1‑148 (MQ=255) tGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGacataca > 2:3098554/1‑148 (MQ=255) aCTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGa > 2:130207/1‑148 (MQ=255) aCTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGa > 2:413003/1‑148 (MQ=255) cTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGaa < 2:808320/148‑1 (MQ=255) cTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGaa < 2:2658925/148‑1 (MQ=255) tGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCGATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACAGACATGAATc > 1:2641641/1‑148 (MQ=255) agagGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGaa > 1:1906441/1‑148 (MQ=255) gagGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAAt < 2:2198035/148‑1 (MQ=255) agGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATc < 1:2349908/148‑1 (MQ=255) ggTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATctg < 2:2569727/148‑1 (MQ=255) ttttCACACTATCTTGCCGTGAATCCCAAACAAACACACTATAAAAACTGTTCAAAGAAGCATCACGTACTAAAGGTAGTCTGCATGAAACTATTACGGAAATAATTACAAAAACAGCTACGACATACATGAATCAGAATCTGCTGGt > 2:751877/1‑148 (MQ=255) tttCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTg > 2:33226/1‑148 (MQ=255) tttCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTg < 2:508/148‑1 (MQ=255) ttCACACGATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTGa < 2:386443/148‑1 (MQ=255) acacTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTGACaa < 1:139778/148‑1 (MQ=255) cacTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTGACaaa < 1:1770410/148‑1 (MQ=255) cTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTGACAAAgc > 1:3471969/1‑148 (MQ=255) cTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTGACAAAGCGCGa > 2:3379936/1‑148 (MQ=255) cTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTGACAAAGCGCGa > 2:3356309/1‑148 (MQ=255) cTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTGACAAAGCGCGa > 1:2142722/1‑148 (MQ=255) tGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTGACAAAGCGCGACg < 1:716019/148‑1 (MQ=255) tGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTGACAAAGCGCGACg < 2:107734/148‑1 (MQ=255) | ACAGTTATTTTTAACAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTGACAAAGCGCGACG > CP009273/2338088‑2338377 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |