| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,587,434 | T→A | 6.8% | L595F (TTA→TTT) | tmcA ← | elongator methionine tRNA (ac4C34) acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,587,434 | 0 | T | A | 6.8% | 585.4 / 3.6 | 214 | L595F (TTA→TTT) | tmcA | elongator methionine tRNA (ac4C34) acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (72/122); new base A (18/2); total (90/124) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.61e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 217 total aligned reads displayed.
CTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGACGTAAACGG > CP009273/2587289‑2587581 | ctTCCCGCTGACGGACCAGTAACATCTTGCGGGCTGTATGTTTATGTGTGGTACATACCTGCGCATCCCTGGCGTTTTTGTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTaa < 1:1019883/148‑1 (MQ=255) tCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTGTTTCTGTAAACGCCCACGCAGCGCCGGGAATGCCACTTCACTGGTTTTTAACAGACGCACTAACCAACCTAacc > 1:3244219/1‑147 (MQ=255) cccGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAacga < 2:2776042/148‑1 (MQ=255) gCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGt < 2:872420/148‑1 (MQ=255) tGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTa < 1:2870419/148‑1 (MQ=255) gACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTaa < 1:1887015/148‑1 (MQ=255) gACGGACCAGTAACATCTTGCGGCATTAATGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTaa < 1:1863945/148‑1 (MQ=255) aCGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAAt > 2:73977/1‑148 (MQ=255) ggACCAGAAACATCTTGCGGCCTGAAAGTTTAAGTGTGTTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAg < 1:391368/148‑1 (MQ=255) aCCTGTAACATCTTGCGGCCTGATATTTTAAGTGTGGTACATAACTGCGCATCACTGGCTTTTTTCTTTAAACGCCCACGCTGCGCCGGTAATGCCAGTTCACTGGTTTTTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCg < 2:1217496/148‑1 (MQ=255) aCCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCg < 2:1217149/148‑1 (MQ=255) ccATTAACATCTTGCGGCCTGAATTTTTAAGTGTGGTACATAACTGCGAATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGTTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCgg < 1:3087352/148‑1 (MQ=255) ccAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCgg < 2:1900665/148‑1 (MQ=255) ccAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCgg < 2:2549205/148‑1 (MQ=255) ccAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCgg < 2:1900207/148‑1 (MQ=255) ccAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCgg < 2:3395599/148‑1 (MQ=255) ccAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCgg < 2:3469294/148‑1 (MQ=255) cAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGa > 2:1170715/1‑148 (MQ=255) cAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGa < 2:2101318/148‑1 (MQ=255) cAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGa < 2:1351853/148‑1 (MQ=255) tAACATCTTGCGGCGTGAATGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGa < 2:171473/148‑1 (MQ=255) tAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGa < 1:2036857/148‑1 (MQ=255) tAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGa < 2:3143682/148‑1 (MQ=255) tAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGa < 2:188553/148‑1 (MQ=255) cATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGa < 1:141267/148‑1 (MQ=255) aTCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACCCAGCGCCGGTAATGCCAGGTCACTGGTTTGTAACAGAAGCAAAAAGCAACCAAACGACGGTAATAGCGGACGATGAg > 1:1590952/1‑148 (MQ=255) cTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCg < 1:2356734/148‑1 (MQ=255) cTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTATGTAAAAGCCCACGCAGCGCCCGTAATGCCACTTCACTGGTTTTTAACAGACGCAATAAGCAACCAAACCACGTTAATATCGGACCATGAGCg > 1:3030898/1‑148 (MQ=255) tGCGGCCTTAAATTTTATGTGTGTTACATAACTGCGCATCACTGGCTTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGaa < 1:2649357/148‑1 (MQ=255) tGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGaa < 1:3434799/148‑1 (MQ=255) cGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAg < 1:3404230/148‑1 (MQ=255) gCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTGTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTTTTACAGACGCAAAAAGCCACCAAACGACGTTAATATCGGACCATGAGCGAAAGcc > 1:3283905/1‑147 (MQ=255) ccTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCaa < 2:2228929/148‑1 (MQ=255) ccTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCaa < 1:2118838/148‑1 (MQ=255) tGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCaaaa < 1:2060678/148‑1 (MQ=255) aaaGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTTAAAGCCCCCCCAGCGCCGGTAAAGCCCGTTAACTGGTTTGTAACAGACGCAATAAGCAACCAAACCACCGTAATATCGGACGATGAGCGCAAGCaaaaac > 1:2964939/1‑146 (MQ=255) aaGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAAACCCCACCCCGCGCCGGGAATGCCAGTTCACTGGTTTGTAACAGACGCAAAAATCAACCAAACGACGTTAATATCGGACGATGAGCGAAAGCCAAAccc > 1:3315153/1‑147 (MQ=255) tttAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGcc < 1:1188030/148‑1 (MQ=255) aGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCGAGtt > 2:2307189/1‑148 (MQ=255) aGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGtt < 2:2582989/148‑1 (MQ=255) aaaTAACTGCGCATCACGGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATACGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAg < 1:230196/146‑1 (MQ=255) aaCTGCGCATCACTGGCGTTTTTGTGTAAACGCCCCCGCAGCGCCGGTAATGCCACTTCACTGGTTTGTAACAGACGCAAAAAGCAAACTAACCACGTTAATAGCGGACGATGAGCGAAAGCAAAACCCGCCAGGTCAAGCCAgtcgt > 2:2672531/1‑148 (MQ=255) aaCTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAgtcgt < 2:2215835/148‑1 (MQ=255) aaCTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAgtcgt < 2:2618475/148‑1 (MQ=255) cTGCGCATCACTGGCGTTTTTGTGTTAACGCCCACCCACCGCCGGTAATGCCAGTTAACTGGTTTGTAACAGACGCAATAAGCAACCAAACGACGGTAATAGCGGACCATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAgtcgtcg > 1:2806968/1‑148 (MQ=255) gcgcATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGGAATTCCAGTTCACTGGTTTGTAACAGACGCAAAAAGCAACCAAACGACGTTAATATCGGACGATTAGCGAAAGCAAAACCGGCCAGGTCAAGCCAgtcgtcgtc > 1:289402/1‑148 (MQ=255) aTCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGaa < 2:62742/148‑1 (MQ=255) aTCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGAAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGaa < 2:1070208/148‑1 (MQ=255) cACTGGCGTTTTTCTGTAAACGCCCACCCAGCGCCGGTAATGCCCGTTCACGGGGTTGTAACACACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAg > 2:16545/1‑148 (MQ=255) cACTGGCGTTTTTATGTAAACACCCACCCACCGCCCGTAAATCCACTTCACAGGTTTGTAACACACCCAAAAATCAACCAAAAGACGTTAATATCGGACGATGAGCGAAAGCAAAAACGGCCACTTCAAACCAGTCGTCGTCAGAAAg > 2:19703/1‑148 (MQ=255) agtGGCGTTTTTCTTTAAACGCCCACGCAGCGCCGGTATTGCCTTTTCACTGTTTTGTAACAGACGAAATACTCAACCTAACGAATTTAATAGCGGACGTTGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAgg < 1:1435779/146‑1 (MQ=255) aCTGGGGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGTTTTGTAAAAGACGCAATAAGCACCCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAgg < 1:3338363/148‑1 (MQ=255) aCTGGCGTTTTTCTGTAACCGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAgg < 1:1851962/148‑1 (MQ=255) cgggCGTTTTTCTGTAAACGCCCACGCAGCGCCGTTAATGCCAGTTCACTGGTTTGTAACAGACGAAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGa < 1:2147839/146‑1 (MQ=255) cTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCAAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGa < 2:1496892/148‑1 (MQ=255) ggCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACg < 1:2515363/148‑1 (MQ=255) ttCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGt > 1:2186472/1‑148 (MQ=255) tCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGtt > 2:2086097/1‑148 (MQ=255) cTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGttt < 2:2968791/148‑1 (MQ=255) gTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAg < 2:2408859/148‑1 (MQ=255) aaaCGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTg > 2:162824/1‑148 (MQ=255) accGCCCACGCACCGCCGGTAATGCCAGTTCAATGTTTTGTAACAGACGCAATAACCAACCTAACGACGTTAATCGCGGACGATGAGCGAAAGAAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTgg < 2:302901/146‑1 (MQ=255) acccccACGCAGCGCCGGTAATGCCAGTTCACTGGTTTTTAACAGACGCAATAAGCAACCTAACGACGTTAATCGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGa < 1:464122/145‑1 (MQ=255) aCGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCACCCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGa < 1:1088418/148‑1 (MQ=255) aCGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGa > 1:2606736/1‑148 (MQ=255) cGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTACCGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGAt < 2:667351/148‑1 (MQ=255) cAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGa > 2:34039/1‑148 (MQ=255) cAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGa > 1:307367/1‑148 (MQ=255) aGCGCCGGTAATGCCAGTTCAGTGTTTTGTAACAGACGCAATACGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGaa < 1:2969077/148‑1 (MQ=255) cgcCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGc > 2:1951014/1‑148 (MQ=255) gcggttAATGCAATTTAACTGTTTTGTAACAGACGAAATAAGAAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCg < 1:703282/143‑1 (MQ=255) gcCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCg < 2:499005/148‑1 (MQ=255) ccGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGt < 2:1230396/148‑1 (MQ=255) ccGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGt < 2:2855757/148‑1 (MQ=255) tAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCg > 1:2475170/1‑148 (MQ=255) aaTGCCTTTTCATTGTTTTGTAACATAGTAAATAAGCAACATAACGACTTTAATCGCGTACGATGAGCTAAAGAAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGc < 1:910123/148‑1 (MQ=255) aTGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGcc > 1:503230/1‑148 (MQ=255) gTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCa > 1:931839/1‑148 (MQ=255) ttCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCAc > 1:3499518/1‑148 (MQ=255) cACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTg > 1:1154080/1‑148 (MQ=255) aCTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTgc > 2:239795/1‑148 (MQ=255) cTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTgcg < 2:3198665/148‑1 (MQ=255) tGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTgcgc > 1:1849908/1‑148 (MQ=255) tttGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCgag < 1:1776209/148‑1 (MQ=255) tttGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCgag > 1:570665/1‑148 (MQ=255) tGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGagag < 2:2908067/148‑1 (MQ=255) aaaCAGACGAAATAACAAACCTAACGACTTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCt < 1:939673/147‑1 (MQ=255) cAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTgc > 1:2945243/1‑148 (MQ=255) aGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTgcg < 1:260414/148‑1 (MQ=255) gACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTgcgc > 1:916691/1‑148 (MQ=255) aCGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCa > 1:1338426/1‑148 (MQ=255) cGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCAt > 1:1142129/1‑148 (MQ=255) tAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGa < 1:1535879/148‑1 (MQ=255) tAAGCAACCTAACGACGTTAAGAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGa < 2:180746/148‑1 (MQ=255) aaGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGAc > 2:2606093/1‑148 (MQ=255) gCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGACGt > 1:1218842/1‑148 (MQ=255) ccTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGACGTAAAc < 2:3385035/148‑1 (MQ=255) ccTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGACGTAAAc > 1:460638/1‑148 (MQ=255) tAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGACGTAAACgg > 1:2426054/1‑148 (MQ=255) tAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGACGTAAACgg > 1:1140280/1‑148 (MQ=255) | CTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGACGTAAACGG > CP009273/2587289‑2587581 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |