| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,668,397 | C→A | 100% | G242C (GGT→TGT) | yphC ← | putative Zn‑dependent NAD(P)‑binding oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,668,397 | 0 | C | A | 97.2% | 440.7 / 4.1 | 145 | G242C (GGT→TGT) | yphC | putative Zn‑dependent NAD(P)‑binding oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base C (2/2); new base A (75/66); total (77/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.62e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 147 total aligned reads displayed.
GTGCATCAGATCGGCGCTGACCTCGAATTCCACTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGC > CP009273/2668254‑2668541 | tGCATCAGATCGGCGCTGACCTCGAATTCCACTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTggg > 1:3263581/1‑148 (MQ=255) tGCATCAGATCGGCGCTGACCTCGAATTCCACATTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTggg > 1:3263586/1‑148 (MQ=255) cATCAGATCGGCGCTGACCTCGAATTCCACTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTg < 2:2566058/148‑1 (MQ=255) aTCGGCGCTGACCTCGAATTCCACTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCg > 1:2813555/1‑148 (MQ=255) tCGGCGCTGACCTCGAATTCCACTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCgg < 2:2813555/148‑1 (MQ=255) tCGGCGCTGACCTCGAATTCCACTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCgg < 2:3241777/148‑1 (MQ=255) cGGCGCTGACCTCGAATTCCACTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCAAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGc < 1:3418827/148‑1 (MQ=255) cGGCGCTGACCTCGAATTCCACTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCAAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGc < 1:3418425/148‑1 (MQ=255) cgcTGACCTCGAATTCCACTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGAt < 1:2059599/148‑1 (MQ=255) gcTGACCTCGAATTCCACTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATa < 2:1016004/148‑1 (MQ=255) cTGACCTCGAATTCCACTTTTCCGGTGTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATaa < 2:2170997/148‑1 (MQ=255) gACCTCGAATTCCACTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATc > 1:1430873/1‑148 (MQ=255) tCGAATTCCACTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCg > 1:3255469/1‑148 (MQ=255) tCGAATTCCACTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCg > 2:2332706/1‑148 (MQ=255) cGAATTCCACTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCgg > 1:1506055/1‑148 (MQ=255) aaTTCCACTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCa > 1:3129079/1‑148 (MQ=255) ttCCACTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGa > 1:2226403/1‑148 (MQ=255) ttCCACTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGa > 1:1970457/1‑148 (MQ=255) ttCCACTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGa > 1:195378/1‑148 (MQ=255) ttCCACTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGa > 2:1852083/1‑148 (MQ=255) tCCACTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGAc < 1:3021485/148‑1 (MQ=255) ccACTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGAcc < 1:1285442/148‑1 (MQ=255) aCTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCtt < 1:1066925/148‑1 (MQ=255) aCTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCtt > 2:802886/1‑148 (MQ=255) aCTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCtt < 1:1066988/148‑1 (MQ=255) tttCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCgg < 1:598763/148‑1 (MQ=255) tCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCggtg > 2:1460333/1‑148 (MQ=255) ggTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGtt < 1:1663329/148‑1 (MQ=255) tCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTa > 2:1509346/1‑148 (MQ=255) tCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTa > 2:1509210/1‑148 (MQ=255) aCCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTaaa < 2:2130884/148‑1 (MQ=255) aaTGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAg < 2:2532011/148‑1 (MQ=255) aaTGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAg > 1:1943349/1‑148 (MQ=255) gTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCg < 2:2443718/148‑1 (MQ=255) accaccCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGAt < 1:2582646/148‑1 (MQ=255) accaccCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGAt < 1:59375/148‑1 (MQ=255) accaccCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGAt < 1:463095/148‑1 (MQ=255) accaccCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGAt < 1:3214738/148‑1 (MQ=255) caccCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATcc < 1:2628624/148‑1 (MQ=255) caccCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATcc > 1:1711090/1‑148 (MQ=255) caccCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATcc < 2:2460523/148‑1 (MQ=255) accCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCa < 1:1189163/148‑1 (MQ=255) accCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCa < 1:765112/148‑1 (MQ=255) accCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCa < 1:2523494/148‑1 (MQ=255) cccGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCAt > 2:1254920/1‑148 (MQ=255) cccGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCAt < 2:1167822/148‑1 (MQ=255) ccGTCCCCAGTCAGCTGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGTTAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATc < 1:512581/148‑1 (MQ=255) ccGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATc < 1:512359/148‑1 (MQ=255) ccGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATc > 1:1740160/1‑148 (MQ=255) cGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCa > 2:2814201/1‑148 (MQ=255) cGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCa > 1:438506/1‑148 (MQ=255) tCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCAcc > 1:2690554/1‑148 (MQ=255) aGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTaa < 2:1536179/148‑1 (MQ=255) gCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGtt < 1:2646782/148‑1 (MQ=255) cGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGttt > 1:2830827/1‑148 (MQ=255) cGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGttt < 1:2289327/148‑1 (MQ=255) cGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGttt > 1:1079609/1‑148 (MQ=255) cGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGttt < 1:1385779/148‑1 (MQ=255) ggATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGcc < 1:468532/148‑1 (MQ=255) gATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCa > 1:1522649/1‑148 (MQ=255) gATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGAGCCATCACCCCTAACTGTTTTGCCa > 1:1523142/1‑148 (MQ=255) aTTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCAt < 2:2608119/148‑1 (MQ=255) aTTGCAGTGCCAGAAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCAt > 2:3304237/1‑148 (MQ=255) ttGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATc > 1:1514147/1‑148 (MQ=255) gCAGTGCCTGCAAGCGACGTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGGCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGATAAATAGCCGTGATCAATCACCCCTAACTGTTTTGCCATCGc < 2:863616/148‑1 (MQ=255) cAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGcc < 1:2590554/148‑1 (MQ=255) tGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGa > 1:2058585/1‑148 (MQ=255) gCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTc > 1:2199669/1‑148 (MQ=255) gCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTc > 1:2199752/1‑148 (MQ=255) gCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTc < 2:287245/148‑1 (MQ=255) gCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTc < 2:2992844/148‑1 (MQ=255) cAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTcc > 2:3211736/1‑148 (MQ=255) aGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCgg > 2:1409367/1‑148 (MQ=255) aGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCgg > 2:604295/1‑148 (MQ=255) aGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCgg > 2:604894/1‑148 (MQ=255) aGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCgg > 2:2557835/1‑148 (MQ=255) aGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCgg > 2:2493735/1‑148 (MQ=255) gCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGgc > 2:3270323/1‑148 (MQ=255) ccTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGgcagca > 1:3108071/1‑148 (MQ=255) ccTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGgcagca > 1:759390/1‑148 (MQ=255) cTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAACTAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCat > 2:174268/1‑148 (MQ=255) cTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCat > 2:174245/1‑148 (MQ=255) cTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCat > 2:174277/1‑148 (MQ=255) gCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCaa < 2:3047865/148‑1 (MQ=255) gCATTACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGATTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCaa < 1:614536/148‑1 (MQ=255) ttACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGc < 1:2554618/148‑1 (MQ=255) ttACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGc < 2:1068719/148‑1 (MQ=255) ttACCGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGc > 2:183494/1‑148 (MQ=255) ccGGAACAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCga < 2:1211017/148‑1 (MQ=255) cAATCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATcc < 2:1943349/148‑1 (MQ=255) aTCGAGCGCAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGt < 2:2021261/148‑1 (MQ=255) cgcAACATCCGCGCCACAGTGGGTGAGTTCGGCGATACTCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCa < 2:3443183/148‑1 (MQ=255) cgcAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCa > 1:3427538/1‑148 (MQ=255) cgcAACATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCa > 2:2162726/1‑148 (MQ=255) aCATCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACcgc > 2:2407762/1‑148 (MQ=255) aTCCGCGCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGa < 1:3011143/148‑1 (MQ=255) cgcgCCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCt < 2:1354389/148‑1 (MQ=255) gcgcCACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCtt < 1:1810028/148‑1 (MQ=255) ccACAGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCg > 2:1874764/1‑148 (MQ=255) cacaGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTCACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGc < 2:1532983/148‑1 (MQ=255) | GTGCATCAGATCGGCGCTGACCTCGAATTCCACTTTTCCGGTTTCACCAATGTAAACCACCCGTCCCCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGC > CP009273/2668254‑2668541 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |