| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,844,024 | T→A | 100% | C7S (TGC→AGC) | hypA → | protein involved in nickel insertion into hydrogenases 3 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,844,024 | 0 | T | A | 96.0% | 635.2 / 12.3 | 200 | C7S (TGC→AGC) | hypA | protein involved in nickel insertion into hydrogenases 3 |
| Reads supporting (aligned to +/- strand): ref base T (5/3); new base A (91/100); total (96/104) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 200 total aligned reads displayed.
AGCTAAAGATGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGTTTGCCGCGGC > CP009273/2843880‑2844167 | aGCTAAAGATGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGcc < 1:73403/148‑1 (MQ=255) cTAAAGATGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCaa < 2:3392743/148‑1 (MQ=255) cTAAAGATGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCaa < 2:1711770/148‑1 (MQ=255) aGATGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACggg > 2:331600/1‑148 (MQ=255) aTGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCa > 2:641136/1‑148 (MQ=255) tGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATAAGCACGAAATAACCCTCAGCCAACGGGCAc > 1:1363464/1‑148 (MQ=255) gAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACt > 1:428591/1‑148 (MQ=255) tttCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGa > 2:1198751/1‑148 (MQ=255) tcgCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGa < 1:1976441/148‑1 (MQ=255) tcgCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGa < 2:364204/148‑1 (MQ=255) cgCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGAt > 1:3266581/1‑148 (MQ=255) tCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAAcag < 1:158/148‑1 (MQ=255) cGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAAcagc > 2:121886/1‑148 (MQ=255) cGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAAcagc < 1:1635811/148‑1 (MQ=255) cGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAgg < 2:2296911/148‑1 (MQ=255) gtgtCATTTCGACATCATCGAAATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGc < 2:3060242/148‑1 (MQ=255) gtCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCg > 2:1320981/1‑148 (MQ=255) gtCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCg > 1:829775/1‑148 (MQ=255) tCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGc > 1:2816483/1‑148 (MQ=255) tCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGc > 1:1064392/1‑148 (MQ=255) tttCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCaaa > 1:1493884/1‑148 (MQ=255) catcatCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACgg < 2:1581210/148‑1 (MQ=255) catcGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGgcgc > 1:1353153/1‑148 (MQ=255) tcGACATTATTCACCTCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCaa < 2:1558508/148‑1 (MQ=255) gACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCaaaa < 2:53962/148‑1 (MQ=255) aCATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAAc > 2:2144973/1‑148 (MQ=255) cATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAAcg > 1:1003778/1‑148 (MQ=255) cATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAAcg > 1:861678/1‑148 (MQ=255) attattCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAAcgc > 1:811128/1‑148 (MQ=255) tattCACCGCAGGGATAATCAACACTGTCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGt < 2:2222393/148‑1 (MQ=255) attCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTa > 2:1087256/1‑148 (MQ=255) aCCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTg > 2:2036615/1‑148 (MQ=255) ccGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTgg < 1:432501/148‑1 (MQ=255) aGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTc > 1:76683/1‑148 (MQ=255) gggATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCt < 2:1235424/148‑1 (MQ=255) gATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTgg > 1:384945/1‑148 (MQ=255) aTAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGc < 1:3058843/148‑1 (MQ=255) aTAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGc < 1:1801906/148‑1 (MQ=255) aaTCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTc > 2:797064/1‑148 (MQ=255) tCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCaa < 1:2775511/148‑1 (MQ=255) aaCACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGTATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCaaaa > 2:194695/1‑148 (MQ=255) aaCACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCaaaa > 2:1641830/1‑148 (MQ=255) aaCACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCaaaa < 2:3145315/148‑1 (MQ=255) aaCACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCaaaa < 2:3145247/148‑1 (MQ=255) acTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTg < 1:1408773/148‑1 (MQ=255) acTGGCACAATTATTGCTTGTAGCTGACAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTg > 2:211877/1‑148 (MQ=255) acTGGCACAATTATTGCTTGTAGCTGACAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTg > 2:1356182/1‑148 (MQ=255) gCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGgcgc > 1:3355894/1‑148 (MQ=255) gCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGgcgc > 1:2871514/1‑148 (MQ=255) gCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGgcgc > 1:2295084/1‑148 (MQ=255) cacaATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCa < 1:2695471/148‑1 (MQ=255) cacaATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCa < 2:1463737/148‑1 (MQ=255) aaTTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCAttt < 1:273709/148‑1 (MQ=255) ttattGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTc < 2:1493884/148‑1 (MQ=255) tattGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCt > 2:899824/1‑148 (MQ=255) tattGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCt < 1:1329883/148‑1 (MQ=255) tattGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCt < 1:1331571/148‑1 (MQ=255) tattGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCt > 2:2654816/1‑148 (MQ=255) attGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCtt < 2:734091/148‑1 (MQ=255) cTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTgtgt > 1:588050/1‑148 (MQ=255) ttGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTc > 1:836673/1‑148 (MQ=255) tGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCg > 2:3264780/1‑148 (MQ=255) aGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGaaa < 2:2706194/148‑1 (MQ=255) gCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAAc < 1:895659/148‑1 (MQ=255) gCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAAc < 2:311378/148‑1 (MQ=255) gCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAAc > 1:3221095/1‑148 (MQ=255) cTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAAcc > 2:2452385/1‑148 (MQ=255) cAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACCGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATAGGCGCATTTTCTTGTGTCGAAACCAGct > 2:1856656/1‑148 (MQ=255) aaTAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGctc < 2:425849/148‑1 (MQ=255) aTAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGctct < 1:216415/148‑1 (MQ=255) aTAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGctct > 1:1815324/1‑148 (MQ=255) aTAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGctct > 1:271285/1‑148 (MQ=255) aTAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGctct < 1:1393723/148‑1 (MQ=255) tAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGctctc > 1:2912068/1‑148 (MQ=255) tAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGctctc > 1:1197546/1‑148 (MQ=255) tAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGctctc > 2:1357470/1‑148 (MQ=255) tAGTTAATGGGACGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGctctc < 1:494486/148‑1 (MQ=255) gTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCtt > 1:3086944/1‑148 (MQ=255) gTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCtt > 2:667405/1‑148 (MQ=255) gTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCtt < 2:2884255/148‑1 (MQ=255) tAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGc < 1:2010276/148‑1 (MQ=255) tAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGc < 1:2009774/148‑1 (MQ=255) aTGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCt > 2:3382202/1‑148 (MQ=255) aTGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCt > 1:1417125/1‑148 (MQ=255) tGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACATCAGGGCGCAAACGACGGCGCAACACGCGTAACTGGGGTCTTGGTCATTATTGGCGGATTTTCTTGTGTCTAATCCAGCTCTCTTGCCtt < 2:1851549/148‑1 (MQ=255) tGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCtt < 1:914026/148‑1 (MQ=255) gggAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCttt > 2:438253/1‑148 (MQ=255) ggAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCtttt < 1:1506743/148‑1 (MQ=255) ggCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCttttgtt < 1:263411/148‑1 (MQ=255) ggCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCttttgtt < 1:2451375/148‑1 (MQ=255) gCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCttttgttt > 1:1135462/1‑148 (MQ=255) gATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCttttgttttg < 2:505207/148‑1 (MQ=255) atatGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGa < 1:3084994/148‑1 (MQ=255) tatGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGAt > 2:2746215/1‑148 (MQ=255) atGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTGTGTTTTGATc > 2:2321281/1‑148 (MQ=255) cGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGtt < 1:1821873/148‑1 (MQ=255) aaaTAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGTTTg < 1:2860213/148‑1 (MQ=255) aaTAACCCTCTGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGTTTGc > 1:1488214/1‑148 (MQ=255) aaTAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGTTTGc < 1:2578748/148‑1 (MQ=255) ccTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGTTTGCCGCGGc > 1:1676583/1‑148 (MQ=255) | AGCTAAAGATGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGTTTGCCGCGGC > CP009273/2843880‑2844167 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |