Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,881,078 G→T 100% G198G (GGC→GGA cysH ← phosphoadenosine phosphosulfate reductase; PAPS reductase, thioredoxin dependent

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,881,0780GT98.5% 633.0 / 0.5 198G198G (GGC→GGAcysHphosphoadenosine phosphosulfate reductase; PAPS reductase, thioredoxin dependent
Reads supporting (aligned to +/- strand):  ref base G (2/1);  new base T (107/88);  total (109/89)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 198 total aligned reads displayed.

TATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGT  >  CP009273/2880934‑2881221
                                                                                                                                                |                                                                                                                                               
tatTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCa                                                                                                                                              >  2:599407/1‑148 (MQ=255)
  tttACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATg                                                                                                                                            <  1:2462334/148‑1 (MQ=255)
   ttACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGt                                                                                                                                           <  1:2954413/148‑1 (MQ=255)
   ttACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGt                                                                                                                                           >  2:1826258/1‑148 (MQ=255)
    tACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGtt                                                                                                                                          <  2:2929879/148‑1 (MQ=255)
    tACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGtt                                                                                                                                          <  2:2188126/148‑1 (MQ=255)
     aCCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGttt                                                                                                                                         <  1:741843/148‑1 (MQ=255)
      cccTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGACACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGtttt                                                                                                                                        >  2:2741148/1‑148 (MQ=255)
       ccTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGttttt                                                                                                                                       <  1:434755/148‑1 (MQ=255)
        cTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTg                                                                                                                                      <  1:1392272/148‑1 (MQ=255)
        cTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTg                                                                                                                                      <  2:1484231/148‑1 (MQ=255)
         ttCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGc                                                                                                                                     >  1:2343079/1‑148 (MQ=255)
          tCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCa                                                                                                                                    >  1:848504/1‑148 (MQ=255)
          tCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCa                                                                                                                                    <  1:3282797/148‑1 (MQ=255)
             tgtAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGAAGGt                                                                                                                                 >  1:2449999/1‑148 (MQ=255)
              gtAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCAAGTTTTTGCAGGTa                                                                                                                                >  1:3392587/1‑148 (MQ=255)
               tAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTAc                                                                                                                               <  1:1271531/148‑1 (MQ=255)
                  cccACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGa                                                                                                                            >  2:888534/1‑148 (MQ=255)
                   ccACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGAt                                                                                                                           >  2:1402632/1‑148 (MQ=255)
                   ccACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGAt                                                                                                                           >  1:1143789/1‑148 (MQ=255)
                    cacaGTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATa                                                                                                                          <  2:385071/148‑1 (MQ=255)
                     acaTTCCCTTTTTAAGCCACAGACACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATaa                                                                                                                         <  2:2937061/148‑1 (MQ=255)
                     acaTTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATaa                                                                                                                         <  1:1028278/148‑1 (MQ=255)
                     acaTTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATaa                                                                                                                         >  1:124641/1‑148 (MQ=255)
                      caTTCCCTTTTTAAGCCAAAGAAACGCGTGTCGTCGTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATaaa                                                                                                                        <  2:3245931/148‑1 (MQ=255)
                       aTTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAAt                                                                                                                       <  2:3382077/148‑1 (MQ=255)
                         tCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAg                                                                                                                     <  2:722735/148‑1 (MQ=255)
                            cTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTc                                                                                                                  <  2:1567470/148‑1 (MQ=255)
                              ttttAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTATTGATAAATAGTTCgg                                                                                                                >  1:1039057/1‑148 (MQ=255)
                              ttttAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCgg                                                                                                                <  1:599407/148‑1 (MQ=255)
                                ttAAGCCACAGAAACGCGTTTCTTCTTCCGCCAGGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGtt                                                                                                              <  2:3331435/148‑1 (MQ=255)
                                 tAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTa                                                                                                             >  2:3137057/1‑148 (MQ=255)
                                  aaGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTAt                                                                                                            >  1:3142735/1‑148 (MQ=255)
                                   aGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATc                                                                                                           >  2:2999280/1‑148 (MQ=255)
                                      cAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCa                                                                                                        <  1:2137719/148‑1 (MQ=255)
                                       aaaGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAg                                                                                                       >  1:2757953/1‑148 (MQ=255)
                                       aaaGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAg                                                                                                       >  1:775421/1‑148 (MQ=255)
                                       aaaGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAg                                                                                                       <  1:228818/148‑1 (MQ=255)
                                       aaaGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTAACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATTGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAg                                                                                                       >  1:2191974/1‑148 (MQ=255)
                                         aGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTc                                                                                                     >  1:920106/1‑148 (MQ=255)
                                          gAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATACCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCg                                                                                                    <  1:268312/148‑1 (MQ=255)
                                          gAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATGTACGGGTTGTATGGGTATCGCCCACCGATAAATATCATTCATCCCAAAATGGGTGATATTTCAGTCCATTTTTTTGCAGTTACAGATAAATAGTTCGGTTATCCCAGTCg                                                                                                    >  1:1722744/1‑148 (MQ=255)
                                               gcgTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAAt                                                                                               <  2:251726/148‑1 (MQ=255)
                                                  tttCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCgg                                                                                            >  2:744352/1‑148 (MQ=255)
                                                     cttcttcCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGgcag                                                                                         >  2:2022896/1‑148 (MQ=255)
                                                      ttcttcCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGgcagc                                                                                        <  1:1557998/148‑1 (MQ=255)
                                                        cttcCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCAc                                                                                      >  1:2225898/1‑148 (MQ=255)
                                                        cttcCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCAc                                                                                      >  1:2225874/1‑148 (MQ=255)
                                                        cttcCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCAc                                                                                      >  2:3232099/1‑148 (MQ=255)
                                                         ttcCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACt                                                                                     >  2:2547478/1‑148 (MQ=255)
                                                             gCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTaa                                                                                 <  2:3360673/148‑1 (MQ=255)
                                                               cATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAAt                                                                               >  1:1988124/1‑148 (MQ=255)
                                                                aTGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATa                                                                              <  1:733678/148‑1 (MQ=255)
                                                                aTGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATa                                                                              <  2:171478/148‑1 (MQ=255)
                                                                  gCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACg                                                                            >  1:940073/1‑148 (MQ=255)
                                                                   ccGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGc                                                                           >  2:2237207/1‑148 (MQ=255)
                                                                            cATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGaa                                                                  <  2:848504/148‑1 (MQ=255)
                                                                               ttACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCAGAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCTCTTTAAATACGCCACGCTGAATTg                                                               <  1:565942/148‑1 (MQ=255)
                                                                                 aCGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTNCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGcc                                                             <  1:1781960/148‑1 (MQ=255)
                                                                                    ggTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCTGCACTTTAAATACGCCACGCTGAATTGCCAGc                                                          <  1:2641580/148‑1 (MQ=255)
                                                                                    ggTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGc                                                          <  1:2851120/148‑1 (MQ=255)
                                                                                      ttGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCAc                                                        >  2:1538339/1‑148 (MQ=255)
                                                                                             ggTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTaaa                                                 >  1:3090385/1‑148 (MQ=255)
                                                                                              gTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCATGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAAt                                                <  1:3380135/148‑1 (MQ=255)
                                                                                               tATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAAtt                                               <  1:2073783/148‑1 (MQ=255)
                                                                                               tATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAAtt                                               <  1:667644/148‑1 (MQ=255)
                                                                                                  cGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGc                                            <  1:1906022/148‑1 (MQ=255)
                                                                                                     ccACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACg                                         >  1:513466/1‑148 (MQ=255)
                                                                                                      cACCGATAAATATGCTTCATCCAATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGa                                        <  1:1473514/148‑1 (MQ=255)
                                                                                                      cACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGa                                        >  2:1574375/1‑148 (MQ=255)
                                                                                                        ccGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACt                                      >  1:311745/1‑148 (MQ=255)
                                                                                                         cGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTg                                     >  2:3480417/1‑148 (MQ=255)
                                                                                                         cGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTg                                     >  2:1742596/1‑148 (MQ=255)
                                                                                                            tAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCg                                  >  2:1791578/1‑148 (MQ=255)
                                                                                                              aaTATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGa                                >  2:527263/1‑148 (MQ=255)
                                                                                                               atatCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGaa                               >  2:2218068/1‑147 (MQ=255)
                                                                                                                   ccTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGtt                           <  1:1003738/148‑1 (MQ=255)
                                                                                                                    cTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTc                          <  2:2768733/148‑1 (MQ=255)
                                                                                                                    cTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTc                          <  1:2237399/148‑1 (MQ=255)
                                                                                                                         tCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGgc                     >  2:472448/1‑148 (MQ=255)
                                                                                                                          cccATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGgcg                    >  2:1784032/1‑148 (MQ=255)
                                                                                                                           ccATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGgcgc                   >  1:3298134/1‑148 (MQ=255)
                                                                                                                            cATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCa                  >  2:127509/1‑148 (MQ=255)
                                                                                                                             aTAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAg                 >  1:1329651/1‑148 (MQ=255)
                                                                                                                               aaTGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGc               >  2:1353826/1‑148 (MQ=255)
                                                                                                                                 tGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCa             >  1:2610529/1‑148 (MQ=255)
                                                                                                                                  gggTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAg            >  1:3196459/1‑148 (MQ=255)
                                                                                                                                    gTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCa          <  2:699287/148‑1 (MQ=255)
                                                                                                                                    gTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCa          >  2:2308877/1‑148 (MQ=255)
                                                                                                                                     tGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCaa         <  1:1387588/148‑1 (MQ=255)
                                                                                                                                      gATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCaaa        >  1:1020415/1‑148 (MQ=255)
                                                                                                                                         atTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCa     <  1:844902/148‑1 (MQ=255)
                                                                                                                                         atTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCa     <  1:1074912/148‑1 (MQ=255)
                                                                                                                                          tttCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAg    >  2:2605046/1‑148 (MQ=255)
                                                                                                                                          tttCAGTCCATGTTTTTGCAGGTACTGATAAATAGGTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAg    <  1:1878615/148‑1 (MQ=255)
                                                                                                                                           ttCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAgg   >  2:2740237/1‑148 (MQ=255)
                                                                                                                                           gtCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAgg   <  2:1334218/147‑1 (MQ=255)
                                                                                                                                            tCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGt  <  2:2462609/148‑1 (MQ=255)
                                                                                                                                            tCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGt  <  2:750604/148‑1 (MQ=255)
                                                                                                                                            tCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGt  >  2:825580/1‑148 (MQ=255)
                                                                                                                                                |                                                                                                                                               
TATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGT  >  CP009273/2880934‑2881221

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: