| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,176,820 | G→T | 100% | intergenic (+138/+352) | zupT → / ← ribB | zinc transporter/3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,176,820 | 0 | G | T | 99.5% | 636.6 / ‑4.3 | 194 | intergenic (+138/+352) | zupT/ribB | zinc transporter/3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base T (99/94); total (100/94) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 194 total aligned reads displayed.
TTGGTTAAAAACAACATCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACGAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTGGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGTATAAATTTCACAT > CP009273/3176675‑3176964 | gTTAAAAACAACATCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGaa > 1:1112919/1‑148 (MQ=255) tAAAAACAACATCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAAc > 1:276798/1‑148 (MQ=255) aacaacaacATCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACg < 2:1350070/145‑1 (MQ=255) aaaaaCAACATCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACg < 2:2562900/148‑1 (MQ=255) aaaCAACATCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGcc > 2:724999/1‑148 (MQ=255) aaaCAACATCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGcc > 1:2631479/1‑148 (MQ=255) aaaCAACATCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGcc < 1:98778/148‑1 (MQ=255) aacaacATCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGccc > 2:3045227/1‑148 (MQ=255) aacaacATCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCACTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGccc > 1:3455344/1‑148 (MQ=255) caacaTCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGa > 1:595662/1‑148 (MQ=255) caacaTCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGa > 1:2703616/1‑148 (MQ=255) caacaTCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGa > 2:2019004/1‑148 (MQ=255) caTCAGAAGTTGTCCCGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACaa < 1:218010/148‑1 (MQ=255) caTCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACaa < 1:1489889/148‑1 (MQ=255) aTCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAAt > 1:3052300/1‑148 (MQ=255) aTCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACGAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTGGCGAAACGCCCGACAAt > 2:1254159/1‑148 (MQ=255) tCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATa > 2:1078341/1‑148 (MQ=255) cAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATaa < 2:2062992/148‑1 (MQ=255) gAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACg > 2:2381418/1‑148 (MQ=255) gAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACg > 2:1008897/1‑148 (MQ=255) gAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACg > 2:684606/1‑148 (MQ=255) gAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACg > 2:3183045/1‑148 (MQ=255) aGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGtt > 1:3145468/1‑148 (MQ=255) tGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCa > 1:3494487/1‑148 (MQ=255) tCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCaaa < 1:2400102/148‑1 (MQ=255) ccAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAAt < 2:1961613/148‑1 (MQ=255) ccAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAAt < 2:2932826/148‑1 (MQ=255) gcgcATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCa > 1:1848208/1‑148 (MQ=255) gACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATa < 1:2897169/148‑1 (MQ=255) gACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATa > 1:685012/1‑148 (MQ=255) cTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACcca > 2:1520043/1‑148 (MQ=255) cTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACcca < 2:2979499/148‑1 (MQ=255) tCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACccacc > 2:2788954/1‑148 (MQ=255) tCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACccacc > 2:1415382/1‑148 (MQ=255) ccAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTACTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACaa > 2:1966598/1‑148 (MQ=255) ccAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGGTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACaa < 1:2156739/148‑1 (MQ=255) cTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCag > 2:1732085/1‑148 (MQ=255) ttCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCaga > 1:1607186/1‑148 (MQ=255) ctaaaGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACGATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGcaa > 1:2877434/3‑148 (MQ=255) ctaaaGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGcaa > 1:91333/3‑148 (MQ=255) aaGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGcaatca < 2:2220444/148‑1 (MQ=255) aGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGcaatcaa < 2:3147675/148‑1 (MQ=255) aGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGcaatcaa < 2:3010246/148‑1 (MQ=255) ccTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATa < 1:2085587/148‑1 (MQ=255) tCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATcc < 2:243832/148‑1 (MQ=255) aCCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGt < 1:3487548/148‑1 (MQ=255) ttttCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTAcc < 1:735057/148‑1 (MQ=255) ttttCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTAcc < 1:2017546/148‑1 (MQ=255) tttCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACACACCACAACCAGAGCAATCAATACAATCCAGTACCa > 2:3331321/1‑148 (MQ=255) tCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAgg > 1:2484897/1‑148 (MQ=255) cGGCTGTCTTTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGc < 2:862125/148‑1 (MQ=255) ggCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCg < 1:3474403/148‑1 (MQ=255) ggCTGTCTCTTATCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTTTGTCCTTGCGAAACGCCAGACAATAACTTTTCAAATGCAGGAAATAACCCACCACTACCAGCGCAATCAATACAATCCTGTACCAGGCg < 2:1313140/148‑1 (MQ=255) gCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGa > 2:1546191/1‑148 (MQ=255) gCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGa < 2:2630779/148‑1 (MQ=255) tGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATa < 1:1103155/148‑1 (MQ=255) tGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATa > 1:1148603/1‑148 (MQ=255) gTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATaa < 1:2259099/148‑1 (MQ=255) tctcttctctCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATaaa > 1:573189/1‑148 (MQ=255) tctcttctctCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATaaa < 1:279639/148‑1 (MQ=255) ctcttctctCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAAc < 1:3002836/148‑1 (MQ=255) tctctcGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATcc > 1:1845150/1‑148 (MQ=255) ctcGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCttt < 1:2652170/148‑1 (MQ=255) ctcGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCttt > 2:2534606/1‑148 (MQ=255) ctcGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCttt < 2:588481/148‑1 (MQ=255) tcGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCtttt < 2:295857/148‑1 (MQ=255) tcGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCtttt < 1:1896091/148‑1 (MQ=255) tGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCtt > 1:1768686/1‑148 (MQ=255) tGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCtt > 1:3113615/1‑148 (MQ=255) gTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTa < 2:341630/148‑1 (MQ=255) ttAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAat < 2:1849056/148‑1 (MQ=255) aaGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAatat < 1:153532/148‑1 (MQ=255) gTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATAttt > 2:751427/1‑148 (MQ=255) aTTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTaa > 2:2759706/1‑148 (MQ=255) tGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACaa < 1:186667/148‑1 (MQ=255) gTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAAt < 2:658690/148‑1 (MQ=255) ttCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATa < 1:3313407/148‑1 (MQ=255) tCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATAc < 1:2425727/148‑1 (MQ=255) tCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATAc < 1:662506/148‑1 (MQ=255) ccGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACt < 2:3413374/148‑1 (MQ=255) ccGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACt > 2:458734/1‑148 (MQ=255) ccGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACt > 2:2225492/1‑148 (MQ=255) gcTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAAc < 2:105821/148‑1 (MQ=255) cTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACa < 1:1078341/148‑1 (MQ=255) ttCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACAt > 1:119833/1‑148 (MQ=255) ttCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACAt > 2:1320856/1‑148 (MQ=255) tCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACAtt < 2:352660/148‑1 (MQ=255) gCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGc > 1:1258/1‑148 (MQ=255) cAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCg < 2:2703616/148‑1 (MQ=255) cAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCg < 2:2484897/148‑1 (MQ=255) tGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGtat > 2:2428621/1‑148 (MQ=255) tGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGtat > 2:2428604/1‑148 (MQ=255) gTCTCTGTACTTGAGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGTATaaa < 2:3070656/148‑1 (MQ=255) ctGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGTATAAATTTc < 2:2192776/148‑1 (MQ=255) gTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGTATAAATTTcac < 2:122403/148‑1 (MQ=255) tCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGTATAAATTTcaca > 1:1158269/1‑148 (MQ=255) tCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGTATAAATTTcaca > 1:46275/1‑148 (MQ=255) tCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGTATAAATTTcaca < 1:522731/148‑1 (MQ=255) ccTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGTATAAATTTCACat < 2:528578/148‑1 (MQ=255) ccTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGTATAAATTTCACat < 1:1142439/148‑1 (MQ=255) | TTGGTTAAAAACAACATCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACGAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTGGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGTATAAATTTCACAT > CP009273/3176675‑3176964 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |