| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,590,906 | C→A | 100% | A5A (GCG→GCT) | livK ← | leucine transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,590,906 | 0 | C | A | 99.2% | 853.3 / ‑2.0 | 260 | A5A (GCG→GCT) | livK | leucine transporter subunit |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base A (97/161); total (98/162) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 260 total aligned reads displayed.
TAATTGCCTGACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAG > CP009273/3590761‑3591052 | ttGCCTGACGCGCGCCGTTAAATTCCATCTCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCAtt < 2:2490086/148‑1 (MQ=255) ttGCCTGACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCAtt < 1:2858898/148‑1 (MQ=255) tGCCTGACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATAGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTc > 2:409537/1‑148 (MQ=255) gCCTGACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTcc > 2:1409836/1‑148 (MQ=255) ccTGACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCg > 1:1469603/1‑148 (MQ=255) gACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGttt > 1:3037256/1‑148 (MQ=255) gACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGttt < 2:1876656/148‑1 (MQ=255) aCGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTc > 2:3381287/1‑148 (MQ=255) aCGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTc > 2:2732114/1‑148 (MQ=255) cgcgcCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATa < 1:888013/148‑1 (MQ=255) cgcgcCGTTAAATACCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATa < 1:937217/148‑1 (MQ=255) gcgcCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAg < 2:1029261/148‑1 (MQ=255) cgcCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGt < 1:1669514/148‑1 (MQ=255) ttAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCaaaa > 2:1902635/1‑148 (MQ=255) ttAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCaaaa < 2:2602940/148‑1 (MQ=255) aaaTTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAAt < 1:1866286/148‑1 (MQ=255) tCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATaccc < 2:2543716/148‑1 (MQ=255) tCCATATCGCCCCACTGGACAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATcccc < 2:1448483/148‑1 (MQ=255) cATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCAt < 1:3008875/148‑1 (MQ=255) atatCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCAtt > 1:1517762/1‑148 (MQ=255) atatCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCAtt < 1:2882020/148‑1 (MQ=255) atatCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCAtt < 1:2430858/148‑1 (MQ=255) cGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTg < 2:153772/148‑1 (MQ=255) cGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTg > 1:2401731/1‑148 (MQ=255) cGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTg < 2:3415992/148‑1 (MQ=255) ccccACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAt > 1:1364147/1‑148 (MQ=255) cccACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtg > 2:2816238/1‑148 (MQ=255) cccACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtg < 2:278092/148‑1 (MQ=255) ccACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtgt > 1:347370/1‑148 (MQ=255) aCTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtgttg < 1:115965/148‑1 (MQ=255) cTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtgttgt < 1:490185/148‑1 (MQ=255) tGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtgttgtg < 1:598661/148‑1 (MQ=255) tGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtgttgtg < 2:1899231/148‑1 (MQ=255) tGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtgttgtg < 2:35850/148‑1 (MQ=255) tGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtgttgtg > 2:2287137/1‑148 (MQ=255) gCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtgttgtgttg < 1:2275523/148‑1 (MQ=255) gCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtgttgtgttg < 2:2040441/148‑1 (MQ=255) tCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCttt < 2:3396081/148‑1 (MQ=255) tCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCttt > 1:906176/1‑148 (MQ=255) cGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTg < 1:2816669/148‑1 (MQ=255) gggCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGt < 1:2270131/148‑1 (MQ=255) gggCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGt < 2:3484765/148‑1 (MQ=255) ggCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGtt > 1:1041174/1‑148 (MQ=255) cGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGttttt < 1:833503/148‑1 (MQ=255) gACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATATCGGTGTGTGAAATTGCCAGTGCAATCATCACTGCGATGATAGTTTTAGCATTACGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTAt > 1:663779/1‑148 (MQ=255) aCATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTAtg > 2:5650/1‑148 (MQ=255) gcgcCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTa < 2:311964/148‑1 (MQ=255) gcgcCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTa < 1:1046759/148‑1 (MQ=255) cgcCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTaa < 1:1699791/148‑1 (MQ=255) gcCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAAc < 2:798247/148‑1 (MQ=255) aCAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAAt > 1:3258640/1‑148 (MQ=255) aaCGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCa > 1:3356387/1‑148 (MQ=255) cGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGa > 1:99576/1‑148 (MQ=255) cGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGa < 2:3166014/148‑1 (MQ=255) ggCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGAc < 2:2335802/148‑1 (MQ=255) ggCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGAc < 2:450209/148‑1 (MQ=255) gACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGt < 1:1238116/148‑1 (MQ=255) cTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTc > 2:3345587/1‑148 (MQ=255) tttAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCt > 2:842630/1‑148 (MQ=255) ttAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTTTTAACAAATAAGACTGTTCtt > 2:222354/1‑148 (MQ=255) ttAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCtt > 1:2084873/1‑148 (MQ=255) ttAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCtt > 2:3185107/1‑148 (MQ=255) ttAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCtt > 1:3166597/1‑148 (MQ=255) ttAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCtt < 2:2009526/148‑1 (MQ=255) tAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCttt < 2:3055722/148‑1 (MQ=255) tAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCttt < 2:1133151/148‑1 (MQ=255) aaTATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCtttt < 1:3366299/148‑1 (MQ=255) atatCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCttttt < 2:3257220/148‑1 (MQ=255) atCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCttttttt < 2:2294939/148‑1 (MQ=255) cGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTtat < 1:2388271/148‑1 (MQ=255) tCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATAc < 2:2411596/148‑1 (MQ=255) tAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTg < 2:892415/148‑1 (MQ=255) ctgtgtttGAAATTGCCAGTTCAATCATCCCTGCGTTGATAGTTTTAGCATTGCGTTTAATAGTCAAAAATACCCTTTGGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATAAGACTTTTCTTTTTTTATACTGCACTGttt < 1:2166066/146‑1 (MQ=255) cGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGttt < 1:1917649/148‑1 (MQ=255) cGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGttt < 2:511989/148‑1 (MQ=255) cGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGttt < 2:727593/148‑1 (MQ=255) cGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGttt < 2:3037256/148‑1 (MQ=255) cGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGttt < 2:1691094/148‑1 (MQ=255) cGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGttt < 1:3138728/148‑1 (MQ=255) cGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGttt < 1:397498/148‑1 (MQ=255) ggTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGtttt < 1:1053791/148‑1 (MQ=255) gtgtgtGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGttttt > 1:1957797/1‑148 (MQ=255) tgAAAGTGCCAGTGCAATCATCCCTGCGATGATAGTTTGAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTg < 2:3315920/148‑1 (MQ=255) aaaTTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTc > 2:1358267/1‑148 (MQ=255) aaTTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCt > 2:662024/1‑148 (MQ=255) aTTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTg > 1:1687481/1‑148 (MQ=255) ccAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTa < 1:1168641/148‑1 (MQ=255) aGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAg > 1:3426998/1‑148 (MQ=255) tcatcCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAg > 1:3464804/1‑148 (MQ=255) catcCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAgc > 1:1590543/1‑148 (MQ=255) tcCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAgcgc > 2:3249819/1‑148 (MQ=255) tGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTa < 1:162591/148‑1 (MQ=255) tgatAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTtg > 2:1221150/1‑148 (MQ=255) tgatAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTtg < 1:2732114/148‑1 (MQ=255) atAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTtgtg > 1:748050/1‑148 (MQ=255) tAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGa < 1:2769963/148‑1 (MQ=255) tAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTCTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGa < 1:1017295/148‑1 (MQ=255) aGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGat > 2:302693/1‑148 (MQ=255) gTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGata < 1:427154/148‑1 (MQ=255) tttAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGACTGTATGATTAAGGGGTTAGCTCAGTATTTTTTGataat > 2:2948100/1‑148 (MQ=255) | TAATTGCCTGACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAG > CP009273/3590761‑3591052 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |