| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,667,555 | C→A | 100% | I278I (ATC→ATA) | yhjD → | inner membrane putative BrbK family alternate lipid exporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,667,555 | 0 | C | A | 95.7% | 626.5 / 17.8 | 208 | I278I (ATC→ATA) | yhjD | inner membrane putative BrbK family alternate lipid exporter |
| Reads supporting (aligned to +/- strand): ref base C (5/4); new base A (102/97); total (107/101) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 208 total aligned reads displayed.
GATTGATTGGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAG > CP009273/3667410‑3667700 | attgattgGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGtg < 2:1114268/148‑1 (MQ=255) ttgattgGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGtga > 1:692791/1‑148 (MQ=255) gattgGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGtgatg < 1:2962471/148‑1 (MQ=255) attgGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGtgatga > 1:598870/1‑148 (MQ=255) attgGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGtgatga > 1:598892/1‑148 (MQ=255) ttgGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGAc < 2:1099030/148‑1 (MQ=255) tgGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGAcc > 1:1564405/1‑148 (MQ=255) ggCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACAcc > 2:3360384/1‑148 (MQ=255) gCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACAccc < 1:2569579/148‑1 (MQ=255) aTTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGc > 1:1600084/1‑148 (MQ=255) ttCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCa > 1:1546581/1‑148 (MQ=255) ttCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCa > 1:989579/1‑148 (MQ=255) tCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCAt < 2:2752248/148‑1 (MQ=255) ccATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATc < 1:934221/148‑1 (MQ=255) ccATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATc < 2:3493415/148‑1 (MQ=255) cATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCg < 2:505477/148‑1 (MQ=255) aTCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGt < 2:2206959/148‑1 (MQ=255) tCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGtt > 2:621859/1‑148 (MQ=255) cTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTtg > 1:725571/1‑148 (MQ=255) cTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTtg < 1:2513646/148‑1 (MQ=255) tCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTtgat < 1:2195658/148‑1 (MQ=255) cGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTtgatg < 2:1400218/148‑1 (MQ=255) ccAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGaa < 1:1031639/148‑1 (MQ=255) ccAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGaa < 1:1879370/148‑1 (MQ=255) cAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGaaa < 1:3058158/148‑1 (MQ=255) aaCTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAAt > 2:904991/1‑148 (MQ=255) aCTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATc < 2:2551241/148‑1 (MQ=255) aTCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATcccc > 1:555491/1‑148 (MQ=255) tCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATccccc > 1:1399046/1‑148 (MQ=255) cTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGTTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCct < 2:1580655/148‑1 (MQ=255) tGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCctc < 1:2827852/148‑1 (MQ=255) gCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCctct > 1:1053136/1‑148 (MQ=255) ttttCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTgg < 2:2987079/148‑1 (MQ=255) ttcttcTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGgcg > 2:234353/1‑148 (MQ=255) tcttctGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGgcgc > 2:1726243/1‑148 (MQ=255) cttctGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCgca < 1:313073/148‑1 (MQ=255) tGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCAt < 2:3390991/148‑1 (MQ=255) ggATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCAtt < 1:3275068/148‑1 (MQ=255) ggATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCAtt < 2:1285671/148‑1 (MQ=255) ggATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCAtt > 2:737628/1‑148 (MQ=255) gATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCAttt > 1:875020/1‑148 (MQ=255) cttctGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGt > 1:1761950/1‑148 (MQ=255) ttctGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGtt < 1:1019733/148‑1 (MQ=255) ttctGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGtt > 1:1607402/1‑148 (MQ=255) ctGGCTGTTGCCGCGCCACCGTCCGCGAAAAAAAGCACTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGTAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTcc < 1:113551/148‑1 (MQ=255) ggCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGt > 1:3063155/1‑148 (MQ=255) gCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTg > 2:648316/1‑148 (MQ=255) tGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTggg > 2:969792/1‑148 (MQ=255) tGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTggg < 1:3312241/148‑1 (MQ=255) gCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTgggg < 1:342794/148‑1 (MQ=255) cgcCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGa < 2:2256326/148‑1 (MQ=255) cgcCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGa < 2:189218/148‑1 (MQ=255) cgcCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGa > 1:1517940/1‑148 (MQ=255) cGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCAt < 1:2080503/148‑1 (MQ=255) ccGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCAtttt < 2:1233819/148‑1 (MQ=255) cgcgCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCAttttt < 2:2047402/148‑1 (MQ=255) cgcgCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCGGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCAttttt < 2:1842438/148‑1 (MQ=255) gcAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTa < 2:2624752/148‑1 (MQ=255) aaaaGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTActtc < 2:3115059/148‑1 (MQ=255) aaaaGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTActtc > 1:2334131/1‑148 (MQ=255) aaaaGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTActtc < 2:561063/148‑1 (MQ=255) aaaGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTActtct < 1:286070/148‑1 (MQ=255) aaaGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTActtct < 2:1995425/148‑1 (MQ=255) aaaGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTActtct < 1:2146503/148‑1 (MQ=255) aaGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTActtctt > 2:1506721/1‑148 (MQ=255) gCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCg > 1:34723/1‑148 (MQ=255) cccTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGc > 1:281852/1‑148 (MQ=255) aTTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGtt > 1:287271/1‑148 (MQ=255) aTTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGtt > 1:3509276/1‑148 (MQ=255) aTTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGtt > 1:2985747/1‑148 (MQ=255) aTTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGta > 2:1477622/1‑147 (MQ=255) tCGCGGAACATTTCTGGCTGCTATTGGTGTTGAAGTGATTAAAATAGTGATGCCCTACACCCTGCCATCGTTGATGACATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTg < 2:1154658/148‑1 (MQ=255) cgcgGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGa < 2:296480/148‑1 (MQ=255) cgGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACg > 1:71575/1‑148 (MQ=255) cgGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACg > 1:2745866/1‑148 (MQ=255) aaCATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGTCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTg > 1:3200881/1‑148 (MQ=255) aCATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGt > 1:2027284/1‑148 (MQ=255) aCATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGt > 2:1381480/1‑148 (MQ=255) cATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGtt < 2:2890906/148‑1 (MQ=255) cATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGtt > 2:793087/1‑148 (MQ=255) cATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGtt < 1:2832916/148‑1 (MQ=255) cATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGtt < 1:241848/148‑1 (MQ=255) tttCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGtttt > 2:2266732/1‑148 (MQ=255) gctgctATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCgcgg > 2:2514246/1‑148 (MQ=255) gctgctATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCgcgg > 2:272233/1‑148 (MQ=255) tATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTgg < 1:904991/148‑1 (MQ=255) tATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTgg < 2:725571/148‑1 (MQ=255) aTTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGa < 1:1209866/148‑1 (MQ=255) tttGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCa > 2:3387378/1‑148 (MQ=255) gTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCAccgccg < 1:2266071/148‑1 (MQ=255) tGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGa < 2:692791/148‑1 (MQ=255) gATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGaa < 2:1051186/148‑1 (MQ=255) aTTAAAATCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAat < 2:3251182/148‑1 (MQ=255) aTTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAat > 2:3355345/1‑148 (MQ=255) aTTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAat < 2:2850699/148‑1 (MQ=255) aaaaTAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAAtata > 1:260442/1‑148 (MQ=255) aaTAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATaaa > 1:1224580/1‑148 (MQ=255) aaTAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATaaa > 2:1657871/1‑148 (MQ=255) aaTAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATaaa < 2:3009578/148‑1 (MQ=255) aTCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAg < 2:598873/148‑1 (MQ=255) | GATTGATTGGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAG > CP009273/3667410‑3667700 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |