| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,783,857 | A→T | 94.3% | I283I (ATT→ATA) | tdh ← | L‑threonine 3‑dehydrogenase, NAD(P)‑binding |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,783,857 | 0 | A | T | 94.3% | 597.4 / 20.6 | 192 | I283I (ATT→ATA) | tdh | L‑threonine 3‑dehydrogenase, NAD(P)‑binding |
| Reads supporting (aligned to +/- strand): ref base A (5/6); new base T (91/90); total (96/96) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01 | |||||||||||
Only 100 of 195 total aligned reads displayed.
GGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTAATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTACGAAACGCTGGCGGCGCACCGGACATTTCCAGACCG > CP009273/3783712‑3784001 | gCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATg > 2:197302/1‑148 (MQ=255) gCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATg > 2:2713808/1‑148 (MQ=255) gCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCAGCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATg > 2:2506636/1‑148 (MQ=255) ccGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGaa < 2:1048436/148‑1 (MQ=255) cGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTAATGAAc < 2:2933889/148‑1 (MQ=255) cGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTAATGAAc < 2:3364253/148‑1 (MQ=255) aaCGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACaa < 2:454075/148‑1 (MQ=255) aaCGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACaa > 1:1727558/1‑148 (MQ=255) aaCGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACaa < 2:1643025/148‑1 (MQ=255) aaCGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACaa > 1:3464523/1‑148 (MQ=255) gCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGACCAAGcc > 2:673443/1‑148 (MQ=255) gCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGcc < 2:565969/148‑1 (MQ=255) tAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCttt < 2:747907/148‑1 (MQ=255) gCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGTTGGGTAATGATCGGCTAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTaa < 1:463509/148‑1 (MQ=255) gCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTaa > 1:520194/1‑148 (MQ=255) cgaaaacgCCCTTGTGTAAATCATCGATAGAGAAACGATGGTTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCCGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTaaa < 1:1488491/141‑1 (MQ=255) gTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAg < 2:1250974/148‑1 (MQ=255) aaaGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATc < 2:1529573/148‑1 (MQ=255) aaGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCa < 2:2040635/148‑1 (MQ=255) aGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCAc > 1:630451/1‑148 (MQ=255) aGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCATGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCAATAAATATCAc > 1:1099912/1‑148 (MQ=255) ttCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTgg < 1:2626695/148‑1 (MQ=255) tgcaaaTCATCTATAGATAAACGATGGGTAATGATCGGCTAAAGATCGAGGCCAGACTTAATCAGCGCCGCCATCTTGTACCAGGTTTAAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTcc < 1:1523604/145‑1 (MQ=255) gAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAg < 1:3224908/148‑1 (MQ=255) aaaTCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGt > 1:606055/1‑148 (MQ=255) atcatcGATAGAGAAACGTTGGGTAATGATCGGCTAAAGATCGCGGCCAGACTGAATCAGCGCCCCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCg < 1:7305/148‑1 (MQ=255) tcatcGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACGTTGGTCCAGTCGa > 1:2288521/1‑148 (MQ=255) tcGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAg < 1:799637/148‑1 (MQ=255) tcGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAg < 2:2805129/148‑1 (MQ=255) aTAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACa < 2:2550320/148‑1 (MQ=255) tAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACat < 2:3253927/148‑1 (MQ=255) agagAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACata < 2:1501040/148‑1 (MQ=255) gagaAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTAATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACatat < 2:2683856/148‑1 (MQ=255) gaAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCa < 2:2365050/148‑1 (MQ=255) aaaCGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAg > 1:2467644/1‑148 (MQ=255) aaCGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGa < 1:2342849/148‑1 (MQ=255) aaCGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTAATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGa > 1:2684745/1‑148 (MQ=255) aCGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGAc > 2:2659981/1‑148 (MQ=255) aCGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTAATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGAc > 2:1665435/1‑148 (MQ=255) cGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGAcg > 1:2141817/1‑148 (MQ=255) gATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGAcgg > 1:708909/1‑148 (MQ=255) tGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGAcggcg < 2:1530140/148‑1 (MQ=255) gggTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTAATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGAcggcgg > 2:3512918/1‑148 (MQ=255) ggTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGa > 2:907284/1‑148 (MQ=255) tAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAAt > 1:293294/1‑148 (MQ=255) tAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAAt > 1:2872759/1‑148 (MQ=255) aaTGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTCTGAACAAGCCTTTAAAGATCCCTTTGGTCCAGTCGATAGACCTATCAGACGGCGGAATa > 2:2588718/1‑148 (MQ=255) tGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATAcc < 2:3471420/148‑1 (MQ=255) tGATCGGAGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTAATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATAcc > 1:3183155/1‑148 (MQ=255) gATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATAccc < 2:371582/148‑1 (MQ=255) gATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATAccc < 2:2139996/148‑1 (MQ=255) tCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGAGGAATACCCAg > 1:2987704/1‑148 (MQ=255) cGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGc < 2:210002/148‑1 (MQ=255) gCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCAt > 2:2461566/1‑148 (MQ=255) gCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACAGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCAt < 1:1232630/148‑1 (MQ=255) cGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATc < 2:221525/148‑1 (MQ=255) aaGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCa < 1:269382/148‑1 (MQ=255) aaGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCCGAATACCCAGCATCGCa > 1:2041913/1‑148 (MQ=255) aGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCaa > 1:3027207/1‑148 (MQ=255) gATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAAt < 2:2223067/148‑1 (MQ=255) aTCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATa > 2:3465228/1‑148 (MQ=255) aTCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTAATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATa < 1:1057485/148‑1 (MQ=255) cGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACg < 1:2213900/148‑1 (MQ=255) cGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACg > 2:1461625/1‑148 (MQ=255) gAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACgg < 1:2809652/148‑1 (MQ=255) gCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTGTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCACTACGgccg > 1:722058/1‑148 (MQ=255) aCTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTg < 2:2384922/148‑1 (MQ=255) tCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCAt > 1:1013032/1‑148 (MQ=255) cAGCGCCGCCATCTTGTACCAGGTTTCAAACATCACACGACCGAAAATACCAATTATGAACAATCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATg > 1:1299288/1‑148 (MQ=255) aGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATgg < 2:519829/148‑1 (MQ=255) gcgcCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGgt > 1:1388338/1‑148 (MQ=255) cgccgcCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGgtg < 1:2713808/148‑1 (MQ=255) ccgccATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTc > 2:1535766/1‑148 (MQ=255) gccATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCaa > 1:366581/1‑148 (MQ=255) ccATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAg < 1:1139838/148‑1 (MQ=255) ccATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAg > 1:782913/1‑148 (MQ=255) aTCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCa > 2:1854679/1‑148 (MQ=255) aTCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCa > 2:1853196/1‑148 (MQ=255) tCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCAt > 2:1211985/1‑148 (MQ=255) gTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTa < 1:1595585/148‑1 (MQ=255) gTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTa < 1:197302/148‑1 (MQ=255) cAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTACGaa < 1:2409419/148‑1 (MQ=255) cAGGTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTACGaa > 2:2566486/1‑148 (MQ=255) ggTTTCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTACGAAAc > 1:335634/1‑148 (MQ=255) ttCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTACGAAACGCt > 2:1911407/1‑148 (MQ=255) ttCAAACATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTACGAAACGCt > 2:1712310/1‑148 (MQ=255) aCATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTACGAAACGCTggcgg > 1:2771296/1‑148 (MQ=255) aCATCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTACGAAACGCTggcgg > 2:1477007/1‑148 (MQ=255) aTCTCACGACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTACGAAACGCTGgcggcg < 1:1381460/148‑1 (MQ=255) gACCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTACGAAACGCTGGCGGCGCACCGGa > 2:1721346/1‑148 (MQ=255) aCCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTACGAAACGCTGGCGGCGCACCGGAc < 1:563277/148‑1 (MQ=255) aCCGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTACGAAACGCTGGCGGCGCACCGGAc < 2:2094604/148‑1 (MQ=255) cGTAAATACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTACGAAACGCTGGCGGCGCACCGGACAt < 1:2436233/148‑1 (MQ=255) aaaTACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTACGAAACGCTGGCGGCGCACCGGACATTTc > 1:1836961/1‑148 (MQ=255) aaaTACCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTACGAAACGCTGGCGGCGCACCGGACATTTc > 2:2083111/1‑148 (MQ=255) aCCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTACGAAACGCTGGCGGCGCACCGGACATTTCCAGa < 2:3052555/148‑1 (MQ=255) aCCTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTACGAAACGCTGGCGGCGCACCGGACATTTCCAGa < 2:71400/148‑1 (MQ=255) ccTTTTATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTACGAAACGCTGGCGGCGCACCGGACATTTCCAGAc > 2:3111050/1‑148 (MQ=255) ttttATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTACGAAACGCTGGCGGCGCACCGGACATTTCCAGACCg > 1:2539304/1‑148 (MQ=255) ttttATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTACGAAACGCTGGCGGCGCACCGGACATTTCCAGACCg > 1:2539313/1‑148 (MQ=255) | GGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAGACTGAATCAGCGCCGCCATCTTGTACCAGGTTTCAAACATCTCACGACCGTAAATACCTTTAATGAACAAGCCTTTAAAGATCACTTTGGTCCAGTCGATAGACATATCAGACGGCGGAATACCCAGCATCGCAATACGGCCGCCGTGATTCATGGTGTCAAGCATGGTACGAAACGCTGGCGGCGCACCGGACATTTCCAGACCG > CP009273/3783712‑3784001 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |