| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,860,159 | C→A | 100% | P33P (CCG→CCT) | ibpB ← | heat shock chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,860,159 | 0 | C | A | 99.1% | 521.5 / ‑6.2 | 187 | P33P (CCG→CCT) | ibpB | heat shock chaperone |
| Reads supporting (aligned to +/- strand): ref base C (3/0); major base A (58/120); minor base T (4/0); total (67/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.26e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 188 total aligned reads displayed.
TTTTCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGCGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCAAATCC > CP009273/3860014‑3860300 | ttttCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTAcggagg < 2:22855/148‑1 (MQ=255) tcttctTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTGTCAATGTTGTACGGAGGGCAGc > 1:791325/1‑148 (MQ=255) ttttGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTgg < 1:1920771/148‑1 (MQ=255) tttGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGGACGGAGGGAAGCTCTGGc > 2:2531581/1‑148 (MQ=255) ttGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCt < 1:117382/148‑1 (MQ=255) ttGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCt < 1:1268957/148‑1 (MQ=255) tGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCtt < 1:594876/148‑1 (MQ=255) gctgctCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTc > 2:1756180/1‑148 (MQ=255) gctgctCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTc > 2:1756229/1‑148 (MQ=255) gctgctCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTc > 2:1834857/1‑148 (MQ=255) ctgctCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCa < 2:885459/148‑1 (MQ=255) tgctCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCAc < 1:454485/148‑1 (MQ=255) gctCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCAcc < 2:1377203/148‑1 (MQ=255) cGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCg < 1:1117381/148‑1 (MQ=255) cGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCg < 2:1852923/148‑1 (MQ=255) gCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGtt < 1:2797540/148‑1 (MQ=255) tGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTg < 1:1967727/148‑1 (MQ=255) gCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATGAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTGTTGc > 2:1044970/1‑148 (MQ=255) ttttACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTAAGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑t > 2:2834115/1‑148 (MQ=255) tttACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑Tg < 2:1016827/148‑1 (MQ=255) aCGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGt < 1:858349/148‑1 (MQ=255) ggCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAg < 1:1900431/148‑1 (MQ=255) gcgcGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGt < 2:601995/148‑1 (MQ=255) gcgcGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGt < 2:1186539/148‑1 (MQ=255) cgcgTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGtt < 1:1578801/148‑1 (MQ=255) gTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGt < 2:1768938/148‑1 (MQ=255) aCCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAATGTTGTTAGGGGGGAAGCTCTGGCGGTCAACGGCGGTTTGGAG‑TGCGTTGGGCAGTTTGTCa > 2:633770/1‑148 (MQ=255) cTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGGTGGCCAGTTTGTCcaa > 2:3219773/1‑148 (MQ=255) cTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAAATTTTTAAGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCaaa > 2:1131982/1‑148 (MQ=255) tCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTGTCAATGTTGTTCGGAGGGAAGCTCATGCTTTCACCGGCGTTTTTGAG‑TGCGGTTGCCACGTTGTCaaaaa > 2:1005383/1‑147 (MQ=255) tCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAATGTTGTAAGGCGGGAAGCTCTGGCTTTAAACGGCGTTTTTCAGTTGGGTTGG‑CAGTTTTTCaaaaa > 1:2229206/1‑147 (MQ=255) cAGTTGTATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCg < 2:1262837/148‑1 (MQ=255) cAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCg < 1:2435708/148‑1 (MQ=255) cAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCg < 2:1261884/148‑1 (MQ=255) gTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAt < 2:2091448/148‑1 (MQ=255) gTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTACAG‑TGCGTTGGCCAGTTGGTCAAAACCGAt < 2:3448002/148‑1 (MQ=255) aaTCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGTGGGAAGCTATGGCTTTAACCGGCGTTTTGAAG‑TGCGGTGGCCAGTTTGTAAAAACCCAT‑CCaa > 2:1187427/1‑147 (MQ=255) tctcTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTGTAAATGTTGTACGGAGGGAAGCACTGGCGTTAACCGGCGGTTTGCAG‑TGCGTTGGGCAGTTTTTCAAAACCGAT‑CCCttt > 2:1285804/1‑147 (MQ=255) tctcTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCGTTTATGAATGTTGTTAGGAGGGAAGCTCTGGCTTTGACCGGGGGTTTTGGG‑TGGGGTGGGCAGTTTGTTAAAAACGATACCAtt > 1:463932/1‑148 (MQ=255) ctAAATCTTCCTGTCGGAAACCTGCCAGCGCACGGGTAATGCGTTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGTCGTTTTGCTG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACg < 1:349232/148‑1 (MQ=255) tAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTGTGAATGTTGTACGGCGGGGAGCTCTGGGGTTGACCGGCGGGTTGGAG‑TGGGGTGGGCCGGTTGTGAAAAACGGT‑CCATTGACGc > 1:2170634/1‑148 (MQ=255) aaaTCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCa < 2:522855/148‑1 (MQ=255) aaTCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCAt < 1:2867818/148‑1 (MQ=255) tCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGGCAGTTTGTCAAAACCGAT‑CCATTGACGCATCa > 2:3183046/1‑148 (MQ=255) ttCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGt < 1:2303588/148‑1 (MQ=255) ccTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTgg < 2:949726/148‑1 (MQ=255) ccTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTgg < 1:1248521/148‑1 (MQ=255) ccTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTgg < 1:431183/148‑1 (MQ=255) aCGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCGTTTCTCAAGGTTGTACGGAGGGAAGCCCAGGCTTTCAACGGCGTTGTTCAG‑TGCGTTTGCCCGCTTGTCAAAACAGCA‑ACCTTGAAGCATCCGAGGGGAt > 2:3410593/1‑148 (MQ=255) ggAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATaa < 1:543437/148‑1 (MQ=255) gAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATaaa < 2:2617915/148‑1 (MQ=255) aaaCCTGCCAGCGCTAGGGTATTGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTTGCTTTCACCGGAGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAAt < 1:3451043/148‑1 (MQ=255) tGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGGTTTCACCGGCGTTTTTCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGGGGGGATAAATCGAAg > 2:459914/1‑148 (MQ=255) cAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTa < 1:1005383/148‑1 (MQ=255) cAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTa < 2:3409874/148‑1 (MQ=255) cgcAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGGCGCATCAGTGGGGATAAATCGAAGTTACGc < 2:3214219/148‑1 (MQ=255) gcAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCa < 1:2517666/148‑1 (MQ=255) cAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCAt < 2:815840/148‑1 (MQ=255) cAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCAt < 1:2039080/148‑1 (MQ=255) aaGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAAAGTTGTACGGAGGGCAGCTCTGGCTTTCACCGGCGTGTTGCAG‑TGCGTTGGCCAGTGTGTCAAAACCGAT‑ACAATTACGCAACACTGGGGTTAAAAAGAATTTAAGCATa > 2:1805310/1‑148 (MQ=255) aGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAg < 2:1602806/148‑1 (MQ=255) aGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAg < 2:2096336/148‑1 (MQ=255) aGGGTAATGCGGTAGTGGTTATCGTCGCTGTTCTCACTGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAg < 2:2161048/148‑1 (MQ=255) gggTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGt < 2:2791892/148‑1 (MQ=255) gggTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGGTTGTCAAAACCGAT‑CCAGTGACGCCTCAGGGGGGGTAAATAGAAGTTAAGCATAGt > 2:1087802/1‑148 (MQ=255) gggTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCAACGGCGTTTTTCAG‑TGCGTTGGCCAGTTTGTCAAAACCCAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGt > 2:1087783/1‑148 (MQ=255) ggTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTc < 1:1677111/148‑1 (MQ=255) tGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTtc < 1:1792075/148‑1 (MQ=255) cGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTtctc < 1:2057912/148‑1 (MQ=255) cGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCCGCGTTTTGCAG‑TGCGGTGGCCAGTTTGTCAAAACCGAT‑CCATTGTCGCATCAGTGGGGATAAATAGAAGTTACGCAAAGTCATTtatc > 2:3393695/1‑148 (MQ=255) ggTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTcc < 2:1715635/148‑1 (MQ=255) tAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCtt < 2:1953165/148‑1 (MQ=255) tAGTGGTTATCGTCGCTTTTCTAAATGTTTTACGGAGGGAAGCTCAGGCTTTAAACGGCGTTTTTCAG‑TGCGTTGGCCAGTTTGTCAAAAACGAT‑CCAATTACGCCTCAGTGGGGATAAATCGAAGTTAAGCATAGTCAtttatacat > 2:855242/1‑142 (MQ=255) aGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCTGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTc < 1:1696256/148‑1 (MQ=255) aGTGGTTATCGTCGCTTTTCTCAAATTTGTTAGGAGGGACGCTCTGGCTTTCACCCGCGGTTTGCAG‑TGCGGTGGCCAGATTGTCAAAAACCTT‑ACAATGAAGCCAAAGTGGGGATAAAACGAAGTTAATCAAAGTCATTTATCCtta > 2:3042988/1‑147 (MQ=255) aGTGGTTATCGTCGCTTTTATCAAATTTTTAAGGAGGGAAACTATGGGTTTAACCGGCGTTTTGCAG‑TGCGTTTGGCCGTTTGTCAAAACCCAT‑CCAATTTCACAACAATGGGGATAAAAAGAAGTTAACCATAGTCAATTATccgac > 2:3376201/1‑145 (MQ=255) tGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTa < 1:2548292/148‑1 (MQ=255) ttATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTaaga < 1:1501370/148‑1 (MQ=255) tATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTaagaa < 2:351128/148‑1 (MQ=255) aTCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTaagaag < 1:3046497/148‑1 (MQ=255) tcgtcgCTTTTCTCAATTTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGGTGGCCAGTTTTTCAAAACCGAT‑CCAATGACGCATCAGTGGGGATAAATAGAAGTTAAGCATAGTCATTTATCCTTCTAATAAGc > 2:3222441/1‑148 (MQ=255) cgtcgCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCg < 1:2158646/148‑1 (MQ=255) gtcgCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGa < 2:2229206/148‑1 (MQ=255) tcgCTTTTCTCATTGTTGTAGGGAGGGAAGCTCTGTCTTTCACCGGCGTTTTGCAG‑TGCGTTGGACAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGag < 2:1485521/148‑1 (MQ=255) tcgCTTTTCTAAATGTTGTACGGCGGGAAGCACTGGCTTTCACCGGCGGTTTGCAG‑TTCGTTGGCCCGTTTGTCAAAAACCAT‑CCAATTACGCAACAGTGGGGGTAAATCGAATTTACGCATAGTAATTTATACATATAAGAAGCCag > 2:3002907/1‑148 (MQ=255) cgCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTTTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAATAAGCGagt > 1:1772172/1‑148 (MQ=255) cgCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGagt < 2:1668711/148‑1 (MQ=255) cTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGagtaa < 1:2005499/148‑1 (MQ=255) ttttCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGagtaag > 2:1028604/1‑148 (MQ=255) ttttCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGagtaag < 2:570426/148‑1 (MQ=255) ttttCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAC‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGagtaat > 2:659834/1‑147 (MQ=255) ttCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGagtaagta < 2:506844/148‑1 (MQ=255) cAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTg > 2:1932002/1‑148 (MQ=255) aTGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCa > 2:641138/1‑148 (MQ=255) aTGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCa > 1:2737372/1‑148 (MQ=255) tgttgtACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCaa < 1:1756180/148‑1 (MQ=255) tgttgtACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCaa < 1:1014964/148‑1 (MQ=255) ttgtACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCAAAt < 2:1486303/148‑1 (MQ=255) ttgtACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAC‑TGCGTTGGCCAGTTTGTAAAAACCGAT‑CAATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCAATTCTCCTTCAAAGAAGAGAGTAAGTACCTGCAAAt > 1:3323501/1‑148 (MQ=255) gtACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCAAATcc < 2:2449544/148‑1 (MQ=255) | TTTTCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGCGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAG‑TGCGTTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCAAATCC > CP009273/3860014‑3860300 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |