Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 294,929 C→A 100% E573* (GAA→TAA)  paoC ← PaoABC aldehyde oxidoreductase, Moco‑containing subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009273294,9290CA98.8% 572.3 / ‑1.7 179E573* (GAA→TAA) paoCPaoABC aldehyde oxidoreductase, Moco‑containing subunit
Reads supporting (aligned to +/- strand):  ref base C (0/3);  new base A (80/96);  total (80/99)
Fisher's exact test for biased strand distribution p-value = 2.54e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 179 total aligned reads displayed.

TTTTCGGATTCAGGATGCGTCCTGCAGCACACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTCAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATCAAACCCGACTGCCGAGGCAATCATTTCGCGAAGCT  >  CP009273/294785‑295072
                                                                                                                                                |                                                                                                                                               
ttttCGGATTCAGGATGCGTCTTGCAGCACACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAAt                                                                                                                                              <  1:2676366/148‑1 (MQ=255)
ttttCGGATTCAGGATGCGTCCTGCAGCACACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACTCCGACCTCCACAAAATTACCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTTTTCCGAATTAAAt                                                                                                                                              >  2:2019969/1‑148 (MQ=255)
 tttCGGATTCAGGATGCGTCCTGCAGCACACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATg                                                                                                                                             <  1:2649585/148‑1 (MQ=255)
     ggATTCAGGATGCGTCCTGCAGCACACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGctct                                                                                                                                         <  2:1573953/148‑1 (MQ=255)
            ggATGCGTCCTGCAGCACACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGc                                                                                                                                  <  2:3413463/148‑1 (MQ=255)
             gATGCGTCCTGCAGCACACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCt                                                                                                                                 <  2:493525/148‑1 (MQ=255)
             gATGCGTCCTGCAGCACACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCt                                                                                                                                 >  1:2139844/1‑148 (MQ=255)
               tGCGTCCTGCAGCACACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGt                                                                                                                               <  1:1040665/148‑1 (MQ=255)
               tGCGTCCTGCAGCACACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGt                                                                                                                               <  2:1173459/148‑1 (MQ=255)
                gCGTCCTGCAGCACACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTc                                                                                                                              >  1:3501952/1‑148 (MQ=255)
                gCGTCCTGCAGCACACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTc                                                                                                                              <  1:3512611/148‑1 (MQ=255)
                gCGTCCTGCAGCACACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTc                                                                                                                              <  1:2701794/148‑1 (MQ=255)
                    ccTGCAGCACACACAGCGAGCCTACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACTAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTc                                                                                                                          <  1:1778193/148‑1 (MQ=255)
                    ccTGCAGCACACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTc                                                                                                                          >  1:2157162/1‑148 (MQ=255)
                    ccTGCAGCACACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTc                                                                                                                          <  2:3140136/148‑1 (MQ=255)
                      tGCAGCACACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTg                                                                                                                        >  1:2760713/1‑148 (MQ=255)
                      tGCAGCACACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTg                                                                                                                        >  1:1008293/1‑148 (MQ=255)
                      tGCAGCACACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTg                                                                                                                        >  1:977022/1‑148 (MQ=255)
                      tGCAGCACACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTg                                                                                                                        >  1:977484/1‑148 (MQ=255)
                      tGCAGCACACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTg                                                                                                                        <  1:1414890/148‑1 (MQ=255)
                        cagcaCACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTgcc                                                                                                                      >  1:1902882/1‑148 (MQ=255)
                          gcaCACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTgccgc                                                                                                                    >  1:1968092/1‑148 (MQ=255)
                                   gCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTgg                                                                                                           >  2:1840535/1‑148 (MQ=255)
                                   gCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTgg                                                                                                           >  2:3147677/1‑148 (MQ=255)
                                       gCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTc                                                                                                       >  2:481291/1‑148 (MQ=255)
                                        cATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCa                                                                                                      >  2:2927860/1‑148 (MQ=255)
                                        cATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCa                                                                                                      >  1:1550879/1‑148 (MQ=255)
                                        cATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCa                                                                                                      >  1:3376279/1‑148 (MQ=255)
                                          tACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATg                                                                                                    <  1:3147347/148‑1 (MQ=255)
                                          tACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATg                                                                                                    >  1:3178303/1‑148 (MQ=255)
                                            cGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTa                                                                                                  >  1:1742945/1‑148 (MQ=255)
                                            cGCCGGACCCGAACATCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCCCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTa                                                                                                  >  1:921954/1‑148 (MQ=255)
                                              ccGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGc                                                                                                >  2:559553/1‑148 (MQ=255)
                                               cGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCg                                                                                               <  2:3052578/148‑1 (MQ=255)
                                               cGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCg                                                                                               <  1:1554952/148‑1 (MQ=255)
                                                    ccGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGgcg                                                                                          >  1:1956478/1‑148 (MQ=255)
                                                    ccGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGgcg                                                                                          <  2:1175907/148‑1 (MQ=255)
                                                      gAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCt                                                                                        <  1:3316874/148‑1 (MQ=255)
                                                      gAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCt                                                                                        <  2:514833/148‑1 (MQ=255)
                                                            ctcCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGt                                                                                  <  1:239482/148‑1 (MQ=255)
                                                            ctcCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGt                                                                                  <  1:245647/148‑1 (MQ=255)
                                                                cGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCg                                                                              >  2:1651324/1‑148 (MQ=255)
                                                                     cgcTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGt                                                                         <  2:2577363/148‑1 (MQ=255)
                                                                     cgcTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGt                                                                         >  2:3480848/1‑148 (MQ=255)
                                                                      gcTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTa                                                                        <  2:600340/148‑1 (MQ=255)
                                                                      gcTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTa                                                                        <  2:82698/148‑1 (MQ=255)
                                                                        tATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTCAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAAt                                                                      <  2:1268811/148‑1 (MQ=255)
                                                                        tATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAAt                                                                      <  2:330042/148‑1 (MQ=255)
                                                                         aTGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATc                                                                     <  2:1225899/148‑1 (MQ=255)
                                                                         aTGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATc                                                                     <  2:1736487/148‑1 (MQ=255)
                                                                             aCGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGc                                                                 <  2:3333089/148‑1 (MQ=255)
                                                                             aCGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGc                                                                 <  2:138147/148‑1 (MQ=255)
                                                                             aCGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGc                                                                 <  2:138177/148‑1 (MQ=255)
                                                                             aCGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGc                                                                 <  2:1912711/148‑1 (MQ=255)
                                                                              cGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGcc                                                                >  1:2452786/1‑148 (MQ=255)
                                                                              cGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGcc                                                                >  2:929778/1‑148 (MQ=255)
                                                                                ccGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGt                                                              >  1:1097186/1‑148 (MQ=255)
                                                                                ccGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGt                                                              >  2:3070194/1‑148 (MQ=255)
                                                                                ccGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGt                                                              <  1:3061808/148‑1 (MQ=255)
                                                                                ccGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGt                                                              <  1:3061397/148‑1 (MQ=255)
                                                                                   aCCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCgg                                                           >  1:497398/1‑148 (MQ=255)
                                                                                   aCCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGGTGGTAATCTTGCCGTCgg                                                           >  2:1603531/1‑148 (MQ=255)
                                                                                       ccACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCaaa                                                       <  1:1481980/148‑1 (MQ=255)
                                                                                          caAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTg                                                    <  1:2843225/148‑1 (MQ=255)
                                                                                          caAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTg                                                    >  2:2465591/1‑148 (MQ=255)
                                                                                              aTGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGAc                                                >  2:1172704/1‑148 (MQ=255)
                                                                                              aTGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGAc                                                >  2:3132509/1‑148 (MQ=255)
                                                                                              aTGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGAc                                                >  2:1754479/1‑148 (MQ=255)
                                                                                                gCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTg                                              <  2:874139/148‑1 (MQ=255)
                                                                                                 cccGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGc                                             >  1:1119376/1‑148 (MQ=255)
                                                                                                  ccGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCt                                            <  1:1617222/148‑1 (MQ=255)
                                                                                                  ccGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCt                                            <  1:1617165/148‑1 (MQ=255)
                                                                                                   cGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTc                                           <  1:2699766/148‑1 (MQ=255)
                                                                                                   cGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGGTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTc                                           <  1:1821872/148‑1 (MQ=255)
                                                                                                       aaaGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGa                                       <  2:2304124/148‑1 (MQ=255)
                                                                                                       aaaGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGa                                       <  2:258227/148‑1 (MQ=255)
                                                                                                        aaGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGAt                                      <  1:3381796/148‑1 (MQ=255)
                                                                                                         aGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTTCCGTCGGCAAACTGCGACTGCTCAGGATc                                     >  2:2967521/1‑148 (MQ=255)
                                                                                                         aGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATc                                     >  2:860840/1‑148 (MQ=255)
                                                                                                           gTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATCaa                                   <  1:3014192/148‑1 (MQ=255)
                                                                                                            tCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATCaaa                                  <  1:1543029/148‑1 (MQ=255)
                                                                                                              gACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATCAAAcc                                >  1:1872767/1‑148 (MQ=255)
                                                                                                                 tgctgGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATCAAACCCGa                             <  2:971350/148‑1 (MQ=255)
                                                                                                                    tgGTACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATCAAACCCGACTg                          <  1:2901876/148‑1 (MQ=255)
                                                                                                                    tgGTACTCTTTGCTCAGTGTTCAGAATTAAATGCTCACTTCCGCTGTCAGTATGCAGCCTGAGGTGGCTTCATCTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTCCGACTGCTCAGGATCAAACCCGACTg                          >  2:2704503/1‑148 (MQ=255)
                                                                                                                       tACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATCAAACCCGACTGCCg                       <  2:2347133/148‑1 (MQ=255)
                                                                                                                       tACTCTTTGCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATCAAACCCGACTGCCg                       >  1:3201838/1‑148 (MQ=255)
                                                                                                                               gCTCAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATCAAACCCGACTGCCGAGGCAATc               <  2:1182567/148‑1 (MQ=255)
                                                                                                                                  cAGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATCAAACCCGACTGCCGAGGCAATCAtt            <  2:1906539/148‑1 (MQ=255)
                                                                                                                                   aGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATCAAACCCGACTGCCGAGGCAATCAttt           >  1:701243/1‑148 (MQ=255)
                                                                                                                                   aGTGTTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATCAAACCCGACTGCCGAGGCAATCAttt           <  1:884064/148‑1 (MQ=255)
                                                                                                                                    gtgtTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATCAAACCCGACTGCCGAGGCAATCATTTc          >  1:3272664/1‑148 (MQ=255)
                                                                                                                                     tgtTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATCAAACCCGACTGCCGAGGCAATCATTTcg         <  1:3480446/148‑1 (MQ=255)
                                                                                                                                     tgtTCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATCAAACCCGACTGCCGAGGCAATCATTTcg         >  2:113451/1‑148 (MQ=255)
                                                                                                                                       ttCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATCAAACCCGACTGCCGAGGCAATCATTTcgcg       >  2:2185979/1‑148 (MQ=255)
                                                                                                                                       ttCCGAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATCAAACCCGACTGCCGAGGCAATCATTTcgcg       >  1:1847954/1‑148 (MQ=255)
                                                                                                                                           gAATTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATCAAACCCGACTGCCGAGGCAATCATTTCGCGAAGc   <  1:2230189/148‑1 (MQ=255)
                                                                                                                                            aaTTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATCAAACCCGACTGCCGAGGCAATCATTTCGCGAAGCt  >  1:71818/1‑148 (MQ=255)
                                                                                                                                            aaTTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATCAAACCCGACTGCCGAGGCAATCATTTCGCGAAGCt  <  1:2970153/148‑1 (MQ=255)
                                                                                                                                            aaTTAAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATCAAACCCGACTGCCGAGGCAATCATTTCGCGAAGCt  <  1:2638062/148‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                               
TTTTCGGATTCAGGATGCGTCCTGCAGCACACACAGCGAGCATACGCCGGACCCGAACTTCTCCCGTCGCGCTATGCACGCCGACCTCCACAAAATGCCCGGCAAAGGTCGACTGCTGGTACTCTTTGCTCAGTGTTCCGAATTCAATGCTCTCTTCCGCTGTCAGTCTGCCGCCTGCGGTGGCTTCATGTAGCGTGGCGCTTCGGGTACCGTTGGTAATCTTGCCGTCGGCAAACTGCGACTGCTCAGGATCAAACCCGACTGCCGAGGCAATCATTTCGCGAAGCT  >  CP009273/294785‑295072

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: