| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,012,953 | C→A | 92.9% | R247S (CGT→AGT) | ubiE → | bifunctional 2‑octaprenyl‑6‑methoxy‑1,4‑benzoquinone methylase/ S‑adenosylmethionine:2‑DMK methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,012,953 | 0 | C | A | 92.9% | 564.6 / 31.7 | 214 | R247S (CGT→AGT) | ubiE | bifunctional 2‑octaprenyl‑6‑methoxy‑1,4‑benzoquinone methylase/ S‑adenosylmethionine:2‑DMK methyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (10/6); new base A (100/96); total (110/104) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 215 total aligned reads displayed.
CGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATCGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTCGCGTCTGCTGGGTAAAGTATTGCGCGTG > CP009273/4012808‑4013100 | cgcgAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGt < 2:884825/148‑1 (MQ=255)cgcgAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGt < 1:1308951/148‑1 (MQ=255)cgcgAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGt < 1:3056454/148‑1 (MQ=255) gcgAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTg < 2:2801571/148‑1 (MQ=255) gAACGACGCCGACAGCTACCGGTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGCTTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGt < 2:2542655/148‑1 (MQ=255) aaCGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGtt < 1:964977/148‑1 (MQ=255) aaCGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGtt > 1:3276669/1‑148 (MQ=255) acgacgCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCGGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAACGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCAGAGTGGTta > 2:1915675/1‑148 (MQ=255) acgacgCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTta > 2:858228/1‑148 (MQ=255) acgacgCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTta < 2:2473450/148‑1 (MQ=255) acgacgCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTta > 2:1910845/1‑148 (MQ=255) cgacgCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTtat < 1:2005769/148‑1 (MQ=255) cgCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAg < 2:1912312/148‑1 (MQ=255) gCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGt < 1:1717727/148‑1 (MQ=255) ccGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGtt < 2:662203/148‑1 (MQ=255) cGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTc < 1:2846139/148‑1 (MQ=255) gACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCt > 1:572217/1‑148 (MQ=255) aCAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTg > 2:523603/1‑148 (MQ=255) gCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACa > 1:2739295/1‑148 (MQ=255) cTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAg > 2:173714/1‑148 (MQ=255) cGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGgaga > 2:3412937/1‑148 (MQ=255) ttATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGAcc < 1:1367564/148‑1 (MQ=255) aTCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCgg < 1:2243802/148‑1 (MQ=255) cTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGaa < 1:614544/148‑1 (MQ=255) tGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATCGTGGTTATAAGTTCTGACAGGAGACCGGaaa < 1:447101/148‑1 (MQ=255) gCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATg > 1:3334702/1‑148 (MQ=255) gAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCt < 1:847699/148‑1 (MQ=255) gAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCt < 1:2652353/148‑1 (MQ=255) gAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCt > 1:1686889/1‑148 (MQ=255) aaTCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCtt > 2:1855120/1‑148 (MQ=255) atccatccGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTCCAATCTGACGGCAGGGGTGGTGGCGCGGCATCGTGGGGCTTAGTTCTGACAGGAGACCGGAAGTGCGttt > 2:2724245/1‑148 (MQ=255) ccatccGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTa > 2:2852905/1‑148 (MQ=255) catccGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTaa < 2:1216042/148‑1 (MQ=255) atccGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTaaa > 2:2352263/1‑148 (MQ=255) atccGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTaaa > 2:3185560/1‑148 (MQ=255) ccGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATCGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAAcc > 1:92734/1‑148 (MQ=255) ccGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATCGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAAcc > 1:1549711/1‑148 (MQ=255) tATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCttt > 1:157042/1‑148 (MQ=255) aTGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTa > 1:113560/1‑148 (MQ=255) aTGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACATTTa > 2:2031325/1‑148 (MQ=255) cATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTg < 1:1158027/148‑1 (MQ=255) tCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGAc > 1:3049889/1‑148 (MQ=255) cGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGc < 1:1369930/148‑1 (MQ=255) gATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCa < 2:1871985/148‑1 (MQ=255) gATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCa < 1:247045/148‑1 (MQ=255) ggATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATCGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAAt > 2:962560/1‑148 (MQ=255) ggATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAAt > 1:1957059/1‑148 (MQ=255) gATACCCTGAAAGCGTTGATGAAGGATGCGGGATTCGAAAGTGTCGAGTAATAGTCTCTGACGTCAGGGGGTGTGGCGCTGATTAGTGGTTATAAGTTCTGTCAGTAGTCCGGAAATGCCATTTAATCCTTTAGTGACGGCAGGAAtt < 2:55538/148‑1 (MQ=255) gATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAAtt < 2:741253/148‑1 (MQ=255) aCCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGaa > 1:2199473/1‑148 (MQ=255) cccTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGaaa > 1:3200897/1‑148 (MQ=255) aaaGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTg > 2:241658/1‑148 (MQ=255) aaaGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTg < 1:2337057/148‑1 (MQ=255) aaaGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTg < 2:1420789/148‑1 (MQ=255) aGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCt > 2:1549053/1‑148 (MQ=255) atgatgCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAac < 1:2539866/148‑1 (MQ=255) atgatgCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAac > 2:2283764/1‑148 (MQ=255) atgatgCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAac > 2:2192924/1‑148 (MQ=255) gatgCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAacac < 1:1738679/148‑1 (MQ=255) atgCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACAcc < 2:1580019/148‑1 (MQ=255) gCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCtt > 2:3340357/1‑148 (MQ=255) ggATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCt > 1:2719419/1‑148 (MQ=255) aTTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTc > 1:3082284/1‑148 (MQ=255) aTTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTc > 1:2852612/1‑148 (MQ=255) aTTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTc > 2:823745/1‑148 (MQ=255) aTTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTc > 1:1166484/1‑148 (MQ=255) gtgtCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCgcgc > 1:3425482/1‑148 (MQ=255) tgtCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATCGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCt > 1:740139/1‑148 (MQ=255) tgtCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATCGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCt > 1:739270/1‑148 (MQ=255) tgtCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCt < 2:601141/148‑1 (MQ=255) tCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGa > 2:404222/1‑148 (MQ=255) gacgacTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGaaa < 1:1059485/148‑1 (MQ=255) gACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGaaa < 2:1963079/148‑1 (MQ=255) gACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGaaa < 2:1162059/148‑1 (MQ=255) actactACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGaaaa < 2:1474687/148‑1 (MQ=255) actactACAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGaaaa > 1:2168897/1‑148 (MQ=255) ctactaCAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAAc > 1:3141851/1‑148 (MQ=255) tactacAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACg < 1:472401/148‑1 (MQ=255) acAATCTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGccc > 1:1427545/1‑148 (MQ=255) aTCTGAGGGCTGGGTTTGTTGCGCTGCATAGTGGTTATAATTTCTGACAGTAGACCGGAAATGCCTTTTAAACCTTTATTGACGGCAGGAATTGAAATTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCt < 2:2852543/148‑1 (MQ=255) cTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTcg > 2:2816701/1‑148 (MQ=255) cTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTcg > 2:2969115/1‑148 (MQ=255) cTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTcg > 2:2969638/1‑148 (MQ=255) cTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTcg > 2:3271508/1‑148 (MQ=255) cTGACGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTcg > 1:2098096/1‑148 (MQ=255) aCGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTCGCGt < 2:3494415/148‑1 (MQ=255) cGGCAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTCGCGTc > 1:2564577/1‑148 (MQ=255) cAGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCGGAAAACGGCCCGCTCGCGTctgc < 2:1714642/148‑1 (MQ=255) aGGGGTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTCGCGTctgct < 2:2342929/148‑1 (MQ=255) ggggTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTCGCGTctgctg > 2:1408048/1‑148 (MQ=255) gTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTCGCGTCTGCTGGGt > 1:589543/1‑148 (MQ=255) gTTGTGGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTCGCGTCTGCTGGGt > 1:2352297/1‑148 (MQ=255) ttGTGGCGCTGCATCGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTCGCGTCTGCTGGGTa > 1:302230/1‑148 (MQ=255) tgtgGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAATTGCCTTTTAAACCTTTAGTGACGGCTGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTCGCGTCTGCTGGGTaa < 2:2739295/148‑1 (MQ=255) tgtgGCGCTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTCGCGTCTGCTGGGTaa > 2:2146841/1‑148 (MQ=255) gcgcTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGACTTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTCGCGTCTGCTGGGGAAAgga > 2:3279605/1‑146 (MQ=255) gcgcTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTCGCGTCTGCTGGGTAAAGTa < 2:2905776/148‑1 (MQ=255) gcTGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTCGCGTCTGCTGGGTAAAGTAtt < 2:3049889/148‑1 (MQ=255) tGCATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTCGCGTCTGCTGGGTAAAGTATTgc > 2:800126/1‑148 (MQ=255) cATAGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTCGCGTCTGCTGGGTAAAGTCTTgcgc > 2:1262349/1‑148 (MQ=255) | CGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATCGTGGTTATAAGTTCTGACAGGAGACCGGAAATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTCGCGTCTGCTGGGTAAAGTATTGCGCGTG > CP009273/4012808‑4013100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |